sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 1.585 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 1.571 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 1.534 | |
| 5i39 | FAD | L-amino acid deaminase | / | 0.938 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.893 | |
| 4ysh | FAD | Glycine oxidase | / | 0.879 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.877 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.874 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.862 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.859 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.854 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.851 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.844 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.844 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.842 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.839 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.836 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.827 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.826 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.817 | |
| 2rgh | FAD | Alpha-Glycerophosphate Oxidase | / | 0.815 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.802 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.788 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.788 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.787 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.783 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.780 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.780 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.773 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.773 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.771 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.771 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.770 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.769 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.768 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.768 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.767 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.767 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.767 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.766 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.765 | |
| 3if9 | FAD | Glycine oxidase | 1.4.3.19 | 0.764 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.763 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.761 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.761 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.759 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.758 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.753 | |
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.753 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.751 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.750 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.749 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.746 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.746 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.745 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.744 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.744 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.744 | |
| 4j33 | FAD | Kynurenine 3-monooxygenase | / | 0.741 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.739 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.739 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.738 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.737 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.734 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.733 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.732 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.732 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.730 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.730 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.730 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.730 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.729 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.729 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.727 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.725 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.725 | |
| 3ukk | FDA | UDP-galactopyranose mutase | / | 0.725 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.725 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.724 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.722 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.721 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.721 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.721 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.721 | |
| 3lxd | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.721 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.720 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.720 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.720 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.717 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.717 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.717 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.716 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.716 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.716 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.715 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.715 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.715 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.714 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.714 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.713 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.712 | |
| 2rgo | FAD | Alpha-Glycerophosphate Oxidase | / | 0.712 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.711 | |
| 1d7y | FAD | Ferredoxin reductase | / | 0.710 | |
| 1knr | FAD | L-aspartate oxidase | 1.4.3.16 | 0.710 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.710 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.709 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.709 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.709 | |
| 3znp | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.709 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.708 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.708 | |
| 3rha | FDA | Putrescine oxidase | / | 0.708 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.708 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.708 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.707 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.707 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.707 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.707 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.707 | |
| 2ji6 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.706 | |
| 4x4j | FAD | Putative oxygenase | / | 0.706 | |
| 1f3p | FAD | Ferredoxin reductase | / | 0.704 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.704 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.703 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.703 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.701 | |
| 1gv4 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.701 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.701 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.701 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.701 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.701 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.701 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.701 | |
| 4nte | FAD | DepH | / | 0.701 | |
| 2bab | FAD | Putative aminooxidase | / | 0.700 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.700 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.698 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.697 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.697 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.697 | |
| 1lvl | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.696 | |
| 2ylw | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.696 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.696 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.696 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.696 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.696 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.695 | |
| 3qj4 | FAD | Renalase | / | 0.695 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.695 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.694 | |
| 2bac | FAD | Putative aminooxidase | / | 0.694 | |
| 2c31 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.694 | |
| 2oa1 | FAD | Flavin-dependent tryptophan halogenase RebH | 1.14.19.9 | 0.694 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.694 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.694 | |
| 4dna | FAD | Probable glutathione reductase | / | 0.693 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.692 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.691 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.691 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.691 | |
| 4j2w | FAD | Kynurenine 3-monooxygenase | / | 0.691 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.690 | |
| 2cdu | FAD | NADH oxidase | / | 0.690 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.690 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.689 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.688 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.687 | |
| 1ve9 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.687 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.687 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.687 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.687 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.686 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.685 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.685 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.684 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.684 | |
| 2ar8 | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.684 | |
| 2qa2 | FAD | Polyketide oxygenase CabE | / | 0.684 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.684 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.684 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.683 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.683 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.683 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.683 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.683 | |
| 3mbg | FAD | FAD-linked sulfhydryl oxidase ALR | 1.8.3.2 | 0.683 | |
| 3up5 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.683 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.683 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.683 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.683 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.682 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.681 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.681 | |
| 2isk | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.681 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.681 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.681 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.681 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.681 | |
| 4aox | FAD | Steroid monooxygenase | / | 0.681 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.680 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.680 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.680 | |
| 1djq | FMN | Trimethylamine dehydrogenase | 1.5.8.2 | 0.679 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.679 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.679 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.679 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.678 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.678 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.677 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.677 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.676 | |
| 2bry | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.676 | |
| 4k5r | FAD | Oxygenase | / | 0.676 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.676 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.675 | |
| 2oal | FAD | Flavin-dependent tryptophan halogenase RebH | 1.14.19.9 | 0.675 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.675 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.675 | |
| 4c5o | FAD | Putative monooxygenase | / | 0.675 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.675 | |
| 1j5p | NAD | L-aspartate dehydrogenase | 1.4.1.21 | 0.674 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.674 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.674 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.674 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.674 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.673 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.673 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.673 | |
| 1knp | FAD | L-aspartate oxidase | 1.4.3.16 | 0.672 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.672 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.672 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.672 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.671 | |
| 3ept | FDA | Putative FAD-monooxygenase | / | 0.671 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.671 | |
| 3uoz | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.671 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.671 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.671 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.671 | |
| 5c3j | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.671 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.670 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.670 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.670 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.670 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.669 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.669 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.668 | |
| 4j49 | NAI | Uncharacterized protein | / | 0.668 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.667 | |
| 3fmw | FAD | Oxygenase | / | 0.667 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.667 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.666 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.666 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.666 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.666 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.666 | |
| 3sfe | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.666 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.665 | |
| 3hji | FAD | Vivid PAS protein VVD | / | 0.665 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.665 | |
| 3sfd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.665 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.665 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.665 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.664 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.664 | |
| 2abb | FMN | Pentaerythritol tetranitrate reductase | / | 0.663 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.663 | |
| 2pd7 | FAD | Vivid PAS protein VVD | / | 0.662 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 0.662 | |
| 3fbs | FAD | Oxidoreductase | / | 0.662 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.662 | |
| 4gll | NAD | UDP-glucuronic acid decarboxylase 1 | 4.1.1.35 | 0.662 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.662 | |
| 4tm3 | FAD | KtzI | / | 0.662 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.661 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.661 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.661 | |
| 3p8i | FMN | Pentaerythritol tetranitrate reductase | / | 0.661 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.661 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.660 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.660 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.660 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.660 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.660 | |
| 2ard | FDA | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.659 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.659 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.657 | |
| 2eq7 | NAD | Dihydrolipoyl dehydrogenase | / | 0.657 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.657 | |
| 3jqr | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.657 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.657 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.656 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.656 | |
| 3djl | FAD | Putative acyl-CoA dehydrogenase AidB | 1.3.99 | 0.656 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.655 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.655 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.655 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.655 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.655 | |
| 4h2n | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.655 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.655 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.655 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.654 | |
| 2hq9 | FAD | Mll6688 protein | / | 0.654 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.654 | |
| 2yvf | FAD | Ferredoxin reductase | / | 0.654 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.654 | |
| 3e4v | FMN | Uncharacterized protein | / | 0.654 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.654 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.654 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.653 | |
| 2a1t | FAD | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.7 | 0.653 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.653 | |
| 2e48 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.652 | |
| 2o06 | MTA | Spermidine synthase | 2.5.1.16 | 0.652 | |
| 3awi | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 1.5 | 0.652 | |
| 3g8a | SAH | Ribosomal RNA small subunit methyltransferase G | / | 0.652 | |
| 3qvt | NAI | Myo-inositol-1-phosphate synthase (Ino1) | / | 0.652 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.651 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.651 | |
| 1n9l | FMN | Putative blue light receptor | / | 0.650 | |
| 1vhn | FMN | tRNA-dihydrouridine synthase | / | 0.650 | |
| 4icy | FAD | PgaE | / | 0.650 |