sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.443 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.401 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.351 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.327 | |
| 1gv4 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.324 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.252 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.199 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 1.122 | |
| 4h4v | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.115 | |
| 1d7y | FAD | Ferredoxin reductase | / | 1.111 | |
| 4h4r | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.101 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.100 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.100 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 1.099 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.086 | |
| 2gqw | FAD | Ferredoxin reductase | / | 1.074 | |
| 3gd3 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.067 | |
| 1f3p | FAD | Ferredoxin reductase | / | 1.022 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.993 | |
| 4h4z | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.986 | |
| 4bur | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.976 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.915 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.867 | |
| 1q1r | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.862 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.839 | |
| 4h4w | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.839 | |
| 4h4y | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.839 | |
| 2yvf | FAD | Ferredoxin reductase | / | 0.835 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.835 | |
| 4h4s | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.833 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.832 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.830 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.829 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.825 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.822 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.821 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.821 | |
| 2gr1 | FAD | Ferredoxin reductase | / | 0.820 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.820 | |
| 1q1w | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.819 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.819 | |
| 3fg2 | FAD | Putative rubredoxin reductase | / | 0.815 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.815 | |
| 3lxd | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.815 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.814 | |
| 2v3a | FAD | Rubredoxin-NAD(+) reductase | 1.18.1.1 | 0.806 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.803 | |
| 3lb8 | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.803 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.800 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.799 | |
| 4h4q | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.798 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.797 | |
| 4k5r | FAD | Oxygenase | / | 0.797 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.795 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.795 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.791 | |
| 4h50 | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.791 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.787 | |
| 4em3 | FAD | Coenzyme A disulfide reductase | / | 0.787 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.786 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.786 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.783 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.782 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.782 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.781 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.779 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.779 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.778 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.776 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.776 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.774 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.774 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.772 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.770 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.770 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.768 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.767 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.767 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.767 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.767 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.767 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.764 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.764 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.763 | |
| 3rha | FDA | Putrescine oxidase | / | 0.763 | |
| 4jn9 | FAD | DepH | / | 0.763 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.762 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.760 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.760 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.760 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.759 | |
| 3dgz | FAD | Thioredoxin reductase 2, mitochondrial | 1.8.1.9 | 0.758 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.758 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.757 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.756 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.756 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.754 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.754 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.754 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.753 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.753 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.753 | |
| 5eow | FAD | 6-hydroxynicotinate 3-monooxygenase | 1.14.13.114 | 0.752 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.751 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.751 | |
| 4j33 | FAD | Kynurenine 3-monooxygenase | / | 0.751 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.750 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.749 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.749 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.749 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.748 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.747 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.747 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.747 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.747 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.747 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.746 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.746 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.745 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.745 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.744 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.743 | |
| 2bra | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.742 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.742 | |
| 2v6o | FAD | Thioredoxin glutathione reductase | / | 0.742 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.741 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.740 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.739 | |
| 4j2w | FAD | Kynurenine 3-monooxygenase | / | 0.739 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.738 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.738 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.737 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.736 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.735 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.734 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.733 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.733 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.732 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.732 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.731 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.731 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.730 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.730 | |
| 4j31 | FAD | Kynurenine 3-monooxygenase | / | 0.730 | |
| 2bry | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.729 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.729 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.728 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.728 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.728 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.728 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.728 | |
| 4gav | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.728 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.727 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.727 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.727 | |
| 4z2t | FAD | 2-hydroxybiphenyl-3-monooxygenase | / | 0.727 | |
| 2zzc | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.726 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.726 | |
| 4ntc | FAD | Thioredoxin reductase gliT | / | 0.726 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.725 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.724 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.724 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.723 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.723 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.723 | |
| 4nte | FAD | DepH | / | 0.723 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.722 | |
| 3sqp | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.720 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.720 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.719 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.719 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.719 | |
| 4g6g | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.719 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.718 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.718 | |
| 4dna | FAD | Probable glutathione reductase | / | 0.718 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.717 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.716 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.715 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.714 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.714 | |
| 3syi | FAD | Sulfide-quinone reductase | / | 0.714 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.714 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.713 | |
| 3p9u | FAD | TetX family tetracycline inactivation enzyme | / | 0.713 | |
| 1lvl | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.712 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.711 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.711 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.710 | |
| 3qj4 | FAD | Renalase | / | 0.710 | |
| 3uox | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.710 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.709 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.709 | |
| 2ylx | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.709 | |
| 4tm3 | FAD | KtzI | / | 0.709 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.708 | |
| 4gr1 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.708 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.708 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.707 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.707 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.706 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.706 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.706 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.705 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.705 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.703 | |
| 3kkj | FAD | Renalase | / | 0.703 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.702 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.702 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.702 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.702 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.701 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.701 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.701 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.701 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.700 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.700 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.700 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.700 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.700 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.700 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.699 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.698 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.698 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.697 | |
| 3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.697 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.697 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.696 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.696 | |
| 3ad9 | NAD | Subunit alpha of sarocosine oxidase | / | 0.696 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.696 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.696 | |
| 4tm1 | FDA | KtzI | / | 0.696 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.695 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.695 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.695 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.695 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.695 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.694 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.694 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.692 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.692 | |
| 2gv8 | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.692 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.691 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.691 | |
| 2cdu | FAD | NADH oxidase | / | 0.691 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.691 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.691 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.690 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.690 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.690 | |
| 4a65 | FAD | Thioredoxin reductase | / | 0.690 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.690 | |
| 2qa1 | FAD | PgaE | / | 0.689 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.689 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.689 | |
| 1lpf | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.688 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.688 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.688 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.688 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.688 | |
| 4x4j | FAD | Putative oxygenase | / | 0.688 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.688 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.688 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.687 | |
| 4tlz | FAD | KtzI | / | 0.687 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.686 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.686 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.686 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.686 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.685 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.685 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.685 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.685 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.685 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.685 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.684 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.684 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.684 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.683 | |
| 1h6v | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.683 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.683 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.683 | |
| 4g73 | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.683 | |
| 4g74 | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.683 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.682 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.682 | |
| 3fbs | FAD | Oxidoreductase | / | 0.682 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.682 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.681 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.681 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.681 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.681 | |
| 2ylt | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.680 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.680 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.679 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.679 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.679 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.679 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.678 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.678 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.677 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.676 | |
| 2qa2 | FAD | Polyketide oxygenase CabE | / | 0.676 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.676 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.676 | |
| 4txi | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.676 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.675 | |
| 2j3n | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.675 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.675 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.674 | |
| 2tmd | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.674 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.674 | |
| 3gwf | FAD | Cyclohexanone monooxygenase | / | 0.674 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.673 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.673 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.672 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.671 | |
| 2xls | FAD | Putative flavin-containing monooxygenase | / | 0.671 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.671 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.671 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.670 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.670 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.670 | |
| 4g6h | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.670 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.670 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.669 | |
| 2gqf | FAD | Uncharacterized protein HI_0933 | / | 0.669 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.669 | |
| 3e4v | FMN | Uncharacterized protein | / | 0.668 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.668 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.668 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.667 | |
| 3t14 | FAD | Sulfide-quinone reductase | / | 0.667 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.667 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.667 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.666 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.666 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.666 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.665 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.665 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.665 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.665 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.665 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.665 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.665 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.664 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.664 | |
| 4b65 | FAD | L-ornithine N(5)-monooxygenase | / | 0.664 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.664 | |
| 3jsk | AHZ | Thiamine thiazole synthase | / | 0.663 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.663 | |
| 1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.662 | |
| 1zy8 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.662 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.661 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 0.661 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.660 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.660 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.660 | |
| 2wp5 | FAD | Trypanothione reductase | / | 0.659 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.659 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.659 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.658 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.657 | |
| 4icy | FAD | PgaE | / | 0.657 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.657 | |
| 1fea | FAD | Trypanothione reductase | 1.8.1.12 | 0.656 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.656 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.656 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.655 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.655 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.655 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.655 | |
| 2xvh | FAD | Putative flavin-containing monooxygenase | / | 0.655 | |
| 3gmb | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.655 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.655 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.655 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.654 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.654 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.654 | |
| 3t2k | FAD | Sulfide-quinone reductase | / | 0.654 | |
| 4usr | FAD | Monooxygenase | / | 0.654 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.653 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.653 | |
| 4g9k | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.653 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.652 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.652 | |
| 4ccr | FAD | Thioredoxin reductase | / | 0.651 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.650 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.650 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.650 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.650 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.650 | |
| 4usq | FAD | Pyridine nucleotide-disulfide oxidoreductase | / | 0.650 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.650 |