sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1x1r | GDP | Ras-related protein M-Ras |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1x1r | GDP | Ras-related protein M-Ras | / | 1.028 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.970 | |
| 4q03 | GDP | GTPase KRas | / | 0.960 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.959 | |
| 4lv6 | GDP | GTPase KRas | / | 0.953 | |
| 4tq9 | GDP | GTPase KRas | / | 0.953 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.943 | |
| 3kud | GDP | GTPase HRas | / | 0.941 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.938 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.935 | |
| 4q02 | GDP | GTPase KRas | / | 0.934 | |
| 4dsu | GDP | GTPase KRas | / | 0.932 | |
| 4epw | GDP | GTPase KRas | / | 0.931 | |
| 2ce2 | GDP | GTPase HRas | / | 0.929 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.927 | |
| 4ldj | GDP | GTPase KRas | / | 0.926 | |
| 4obe | GDP | GTPase KRas | / | 0.925 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.923 | |
| 4l9s | GDP | GTPase HRas | / | 0.922 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 0.921 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 0.919 | |
| 4ql3 | GDP | GTPase KRas | / | 0.919 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.916 | |
| 4wa7 | GDP | GTPase KRas | / | 0.915 | |
| 4epx | GDP | GTPase KRas | / | 0.914 | |
| 4xvq | GNP | GTPase HRas | / | 0.914 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 0.905 | |
| 4l8g | GDP | GTPase KRas | / | 0.904 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.903 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.902 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.901 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.901 | |
| 3tgp | GNP | GTPase HRas | / | 0.896 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.896 | |
| 3ref | GDP | Rho family GTPase | / | 0.894 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.892 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.892 | |
| 4k81 | GTP | GTPase HRas | / | 0.892 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.889 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.888 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.887 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 0.885 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 0.884 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.884 | |
| 4xsg | GSP | Transforming protein RhoA | / | 0.883 | |
| 4g0n | GNP | GTPase HRas | / | 0.882 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.881 | |
| 4nyj | GNP | GTPase HRas | / | 0.881 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.880 | |
| 3rs0 | GNP | GTPase HRas | / | 0.880 | |
| 3rsl | GNP | GTPase HRas | / | 0.879 | |
| 5b2z | GNP | GTPase HRas | / | 0.879 | |
| 2rgc | GNP | GTPase HRas | / | 0.878 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 0.878 | |
| 4dlw | GNP | GTPase HRas | / | 0.878 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 0.877 | |
| 4dlx | GNP | GTPase HRas | / | 0.877 | |
| 2cl6 | CAG | GTPase HRas | / | 0.875 | |
| 3oiu | GNP | GTPase HRas | / | 0.875 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 0.874 | |
| 4dso | GSP | GTPase KRas | / | 0.874 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.873 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.873 | |
| 2c5l | GTP | GTPase HRas | / | 0.872 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.870 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.870 | |
| 3k9l | GNP | GTPase HRas | / | 0.870 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.867 | |
| 4luc | GDP | GTPase KRas | / | 0.863 | |
| 4lpk | GDP | GTPase KRas | / | 0.862 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.861 | |
| 2rgg | GNP | GTPase HRas | / | 0.860 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 0.860 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 0.860 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 0.860 | |
| 2rgb | GNP | GTPase HRas | / | 0.859 | |
| 3k8y | GNP | GTPase HRas | / | 0.859 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 0.858 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 0.858 | |
| 3rs4 | GNP | GTPase HRas | / | 0.858 | |
| 3rs5 | GNP | GTPase HRas | / | 0.858 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 0.857 | |
| 3oiw | GNP | GTPase HRas | / | 0.857 | |
| 3rs7 | GNP | GTPase HRas | / | 0.857 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 0.857 | |
| 4l9w | GNP | GTPase HRas | / | 0.857 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.857 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.855 | |
| 3lbi | GNP | GTPase HRas | / | 0.855 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 0.853 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 0.852 | |
| 4xvr | GNP | GTPase HRas | / | 0.851 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 0.850 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 0.849 | |
| 4dsn | GCP | GTPase KRas | / | 0.848 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.847 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.846 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.846 | |
| 2rge | GNP | GTPase HRas | / | 0.844 | |
| 3ddc | GNP | GTPase HRas | / | 0.844 | |
| 3i3s | GNP | GTPase HRas | / | 0.843 | |
| 3v4f | GNP | GTPase HRas | / | 0.843 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.843 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.843 | |
| 4dlt | GNP | GTPase HRas | / | 0.842 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 0.842 | |
| 4dls | GNP | GTPase HRas | / | 0.841 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 0.841 | |
| 1lfd | GNP | GTPase HRas | / | 0.840 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.840 | |
| 3lbn | GNP | GTPase HRas | / | 0.840 | |
| 4dlz | GNP | GTPase HRas | / | 0.840 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.838 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.838 | |
| 4lrw | GDP | GTPase KRas | / | 0.838 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 0.837 | |
| 1kmq | GNP | Transforming protein RhoA | / | 0.835 | |
| 4dvg | GSP | Rho family GTPase | / | 0.834 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.834 | |
| 4ncl | GDP | Eukaryotic translation initiation factor 5B | / | 0.834 | |
| 4nyi | GNP | GTPase HRas | / | 0.834 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.833 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.832 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.831 | |
| 2fna | ADP | Uncharacterized protein | / | 0.831 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.831 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.830 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.827 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.827 | |
| 4dlv | GNP | GTPase HRas | / | 0.827 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.826 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.826 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.826 | |
| 3lbh | GNP | GTPase HRas | / | 0.826 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.826 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.825 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 0.825 | |
| 3l8y | GNP | GTPase HRas | / | 0.825 | |
| 3oiv | GNP | GTPase HRas | / | 0.825 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.825 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.824 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.820 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.815 | |
| 2w2v | GTP | Ras-related C3 botulinum toxin substrate 2 | / | 0.814 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.813 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.813 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.813 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.812 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.808 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.808 | |
| 2uyi | ADP | Kinesin-like protein KIF11 | / | 0.807 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.807 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.806 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.805 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.804 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.803 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.802 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.800 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.800 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.799 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.798 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.798 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.798 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.798 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.796 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.796 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.795 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.795 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.794 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.794 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.794 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.789 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.787 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.787 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.787 | |
| 4mit | GTP | Rho-related protein racC | / | 0.787 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.787 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.786 | |
| 2x7e | ADP | Kinesin-like protein KIF11 | / | 0.786 | |
| 2zts | ADP | Uncharacterized protein | / | 0.786 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.786 | |
| 5cyo | GDP | Septin-9 | / | 0.786 | |
| 1xmv | ADP | Protein RecA | / | 0.785 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.785 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.785 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.784 | |
| 1l8q | ADP | Chromosomal replication initiator protein DnaA | / | 0.782 | |
| 1wbb | ADP | DNA mismatch repair protein MutS | / | 0.781 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.781 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.780 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.779 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.778 | |
| 3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.778 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.777 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.777 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.776 | |
| 1w5s | ADP | ORC1-type DNA replication protein 2 | / | 0.775 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.775 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.774 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.774 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.773 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.772 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.772 | |
| 3mle | ADP | ATP-dependent dethiobiotin synthetase BioD | 6.3.3.3 | 0.772 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.771 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.771 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.770 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.770 | |
| 2zfi | ADP | Kinesin-like protein KIF1A | / | 0.770 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.770 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.769 | |
| 4ihq | ADP | Conserved Archaeal protein | / | 0.769 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.769 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.768 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.768 | |
| 3cob | ADP | Kinesin heavy chain-like protein | / | 0.768 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.767 | |
| 4asu | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.767 | |
| 4v02 | ATP | Site-determining protein | / | 0.767 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.766 | |
| 2xae | ADP | Kinesin-like protein KIF11 | / | 0.766 | |
| 4ap0 | ADP | Kinesin-like protein KIF11 | / | 0.766 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.766 | |
| 5ftc | ADP | TPR domain protein | / | 0.766 | |
| 1i4l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.765 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.765 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.765 | |
| 4b7b | ADP | Kinesin-like protein KIF11 | / | 0.765 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.764 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.764 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.764 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.764 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.763 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.763 | |
| 4zca | ADP | Kinesin-like protein KIF11 | / | 0.763 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.761 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.761 | |
| 1e1q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.760 | |
| 3r9x | GNP | GTPase Era | / | 0.760 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.760 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.759 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.759 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.758 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.757 | |
| 1njf | ADP | DNA polymerase III subunit tau | 2.7.7.7 | 0.756 | |
| 1z6t | ADP | Apoptotic protease-activating factor 1 | / | 0.756 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.755 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.755 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.755 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.755 | |
| 4tl7 | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.755 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.755 | |
| 3r9i | ADP | Septum site-determining protein MinD | / | 0.754 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.753 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.753 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.752 | |
| 2gks | ADP | Probable bifunctional SAT/APS kinase | 2.7.1.25 | 0.752 | |
| 3k3b | ADP | Kinesin-like protein KIF11 | / | 0.752 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.752 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.751 | |
| 3ieu | GDP | GTPase Era | / | 0.751 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.751 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.750 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.749 | |
| 3tif | ADP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.748 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.748 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.748 | |
| 5bn3 | ADP | NEQ263 | / | 0.748 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.748 | |
| 3qbv | GDP | Cell division control protein 42 homolog | / | 0.746 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.746 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.745 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.745 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.745 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.745 | |
| 4d81 | ADP | AAA ATPase, central domain protein | / | 0.744 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.742 | |
| 3qpv | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.742 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.742 | |
| 4ma4 | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.741 | |
| 2axn | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | / | 0.740 | |
| 2i1v | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.740 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.740 | |
| 2zr9 | DTP | Protein RecA | / | 0.739 | |
| 3d8b | ADP | Fidgetin-like protein 1 | 3.6.4 | 0.739 | |
| 4iok | ADP | Formate--tetrahydrofolate ligase | / | 0.739 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.738 | |
| 1a4r | GNH | Cell division control protein 42 homolog | / | 0.737 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.736 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.736 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.736 | |
| 4yqf | GDP | Septin-9 | / | 0.736 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.734 | |
| 3k1j | ADP | ATP-dependent protease Lon | / | 0.734 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.734 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.734 | |
| 1ii6 | ADP | Kinesin-like protein KIF11 | / | 0.733 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.733 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.733 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.733 | |
| 3l9h | ADP | Kinesin-like protein KIF11 | / | 0.733 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.732 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.731 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.731 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.731 | |
| 5fl3 | ADP | Pili retraction protein PilT | / | 0.731 | |
| 3ftq | GNP | Septin-2 | / | 0.730 | |
| 4hse | ADP | Chaperone protein ClpB | / | 0.730 | |
| 4jlo | ADP | Adenylate kinase | / | 0.729 | |
| 3tlx | ADP | Adenylate kinase 2 | / | 0.726 | |
| 2whx | ADP | Genome polyprotein | 3.4.21.91 | 0.725 | |
| 3moh | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.725 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.725 | |
| 4ymu | ATP | ABC-type polar amino acid transport system, ATPase component | / | 0.725 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.724 | |
| 3ea0 | ATP | ATPase, ParA family | / | 0.724 | |
| 4xjx | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.724 | |
| 4yer | ADP | Antibiotic ABC transporter, ATP-binding protein, putative | / | 0.724 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.723 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.723 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.722 | |
| 3l1c | ADP | Protein claret segregational | / | 0.722 | |
| 4jld | ADP | Adenylate kinase | / | 0.722 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.721 | |
| 4mkh | AP5 | Adenylate kinase | / | 0.721 | |
| 1ake | AP5 | Adenylate kinase | / | 0.720 | |
| 1in5 | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.720 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.720 | |
| 4jl5 | ADP | Adenylate kinase | / | 0.720 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.720 | |
| 4ww0 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.720 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.719 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.719 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.719 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.718 | |
| 4ike | ADP | Adenylate kinase | / | 0.718 | |
| 4ww4 | ADP | RuvB-like helicase | / | 0.718 | |
| 4x8o | AP5 | Adenylate kinase | / | 0.718 | |
| 2eck | ADP | Adenylate kinase | / | 0.717 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.717 | |
| 2c9o | ADP | RuvB-like 1 | 3.6.4.12 | 0.716 | |
| 1fnn | ADP | ORC1-type DNA replication protein | / | 0.715 | |
| 2xsz | ATP | RuvB-like 2 | 3.6.4.12 | 0.715 | |
| 4a51 | ADP | Kinesin-like protein KIF11 | / | 0.715 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.713 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.713 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.713 | |
| 3c41 | ANP | Amino acid ABC transporter | / | 0.713 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.713 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.713 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.712 | |
| 1nly | AGS | Cag alpha | / | 0.712 | |
| 2jj1 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.712 | |
| 4ag5 | ADP | Type IV secretory pathway VirB4 components-like protein | / | 0.712 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.711 | |
| 1xbt | TTP | Thymidine kinase, cytosolic | 2.7.1.21 | 0.708 | |
| 3kji | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.708 | |
| 1g6o | ADP | Cag alpha | / | 0.707 | |
| 1gqy | ACP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.707 | |
| 1svw | GTP | Probable GTP-binding protein EngB | / | 0.707 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.707 | |
| 2bbw | GP5 | Adenylate kinase 4, mitochondrial | / | 0.707 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.706 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.704 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.704 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.703 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.703 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.703 | |
| 1ny5 | ADP | Transcriptional regulator (NtrC family) | / | 0.703 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.702 | |
| 2ad5 | ADP | CTP synthase | / | 0.701 | |
| 2ax4 | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 | 2.7.1.25 | 0.700 | |
| 3pfi | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.700 | |
| 1xms | ANP | Protein RecA | / | 0.699 | |
| 4jky | ADP | Adenylate kinase | / | 0.699 | |
| 2fl2 | ADP | Kinesin-like protein KIF11 | / | 0.698 | |
| 2msc | GDP | MHC class I alpha chain | / | 0.698 | |
| 2vf7 | ADP | UvrABC system protein A | / | 0.698 | |
| 1xnj | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | 2.7.1.25 | 0.697 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.696 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.696 | |
| 1k6m | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 | 2.7.1.105 | 0.695 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.695 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.694 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.694 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.693 | |
| 1j7k | ATP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.692 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.691 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.691 | |
| 2g1q | ADP | Kinesin-like protein KIF11 | / | 0.691 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.691 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.691 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.691 | |
| 5k5z | ANP | Uncharacterized protein | / | 0.690 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.688 | |
| 4be7 | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.688 | |
| 2uz3 | TTP | Thymidine kinase | / | 0.687 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.686 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.686 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.686 | |
| 2dr3 | ADP | UPF0273 protein PH0284 | / | 0.685 | |
| 3thy | ADP | DNA mismatch repair protein Msh2 | / | 0.685 | |
| 3sop | GDP | Neuronal-specific septin-3 | / | 0.684 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.684 | |
| 1ht2 | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.682 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.682 | |
| 1sxj | AGS | Replication factor C subunit 1 | / | 0.682 | |
| 4i1v | ADP | Dephospho-CoA kinase | / | 0.682 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.681 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.681 | |
| 2bif | ANP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.680 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.680 | |
| 1oyy | AGS | ATP-dependent DNA helicase RecQ | 3.6.4.12 | 0.679 | |
| 4iei | ADP | Gene 2 protein | / | 0.679 | |
| 4o3m | ADP | Bloom syndrome protein | 3.6.4.12 | 0.679 | |
| 5cyp | GSP | Septin-9 | / | 0.679 | |
| 1im2 | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.678 | |
| 1njf | AGS | DNA polymerase III subunit tau | 2.7.7.7 | 0.678 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.678 | |
| 2zro | ADP | Protein RecA | / | 0.677 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.677 | |
| 3qcz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.677 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.676 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.676 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.675 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.675 | |
| 4idp | GNP | Atlastin-1 | 3.6.5 | 0.674 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.673 | |
| 4wpu | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.673 | |
| 1ohh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.672 | |
| 1ohh | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.672 | |
| 3fmo | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.671 | |
| 1sxj | ADP | Replication factor C subunit 5 | / | 0.670 | |
| 2c96 | ATP | Psp operon transcriptional activator | / | 0.670 | |
| 2ce7 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.669 | |
| 2c98 | ADP | Psp operon transcriptional activator | / | 0.668 | |
| 1bif | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.667 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.667 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.665 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.665 | |
| 1y3a | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.664 | |
| 1s3s | ADP | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.662 | |
| 3bxz | ADP | Protein translocase subunit SecA | / | 0.662 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.662 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.661 | |
| 3aez | GDP | Pantothenate kinase | 2.7.1.33 | 0.661 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.661 | |
| 4rz3 | ADP | Site-determining protein | / | 0.661 | |
| 3pyz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.660 | |
| 1f5n | GNP | Guanylate-binding protein 1 | / | 0.659 | |
| 5bn4 | ANP | V-type ATP synthase alpha chain | / | 0.658 | |
| 3cf0 | ADP | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.657 | |
| 1q12 | ATP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.656 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.655 | |
| 1nsf | ATP | Vesicle-fusing ATPase | 3.6.4.6 | 0.654 | |
| 2fgj | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.653 | |
| 2o8b | ADP | DNA mismatch repair protein Msh2 | / | 0.653 | |
| 2q2y | ADP | Kinesin-like protein KIF11 | / | 0.653 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.650 | |
| 4e03 | ADP | Plasmid partitioning protein ParF | / | 0.650 |