2.700 Å
X-ray
2007-07-03
| Name: | ATP synthase subunit alpha, mitochondrial | ATP synthase subunit beta, mitochondrial | ATP synthase subunit gamma, mitochondrial |
|---|---|---|---|
| ID: | ATPA_BOVIN | ATPB_BOVIN | ATPG_BOVIN |
| AC: | P19483 | P00829 | P05631 |
| Organism: | Bos taurus | ||
| Reign: | Eukaryota | ||
| TaxID: | 9913 | ||
| EC Number: | / | 3.6.3.14 | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 17 % |
| C | 20 % |
| E | 7 % |
| F | 20 % |
| G | 37 % |
| B-Factor: | 21.864 |
|---|---|
| Number of residues: | 31 |
| Including | |
| Standard Amino Acids: | 30 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.167 | 486.000 |
| % Hydrophobic | % Polar |
|---|---|
| 59.72 | 40.28 |
| According to VolSite | |

| HET Code: | PIT |
|---|---|
| Formula: | C14H12O4 |
| Molecular weight: | 244.243 g/mol |
| DrugBank ID: | DB08399 |
| Buried Surface Area: | 63.1 % |
| Polar Surface area: | 80.92 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 4 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| -5.93561 | 24.9512 | 8.8935 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C3 | CB | ALA- 256 | 3.71 | 0 | Hydrophobic |
| C1 | CB | THR- 259 | 4.16 | 0 | Hydrophobic |
| C9 | CG | LYS- 260 | 3.39 | 0 | Hydrophobic |
| C14 | CB | ILE- 263 | 3.71 | 0 | Hydrophobic |
| C12 | CG | GLU- 264 | 3.84 | 0 | Hydrophobic |
| C11 | CB | ALA- 278 | 4.28 | 0 | Hydrophobic |
| C10 | CG2 | VAL- 279 | 3.71 | 0 | Hydrophobic |
| C3 | CG | ARG- 291 | 3.78 | 0 | Hydrophobic |
| O3 | N | GLU- 292 | 2.83 | 128.52 | H-Bond (Protein Donor) |
| C2 | CG | GLU- 292 | 4.04 | 0 | Hydrophobic |
| O2 | O | HOH- 2056 | 3.02 | 143.87 | H-Bond (Protein Donor) |