2.700 Å
X-ray
2007-07-03
Name: | ATP synthase subunit alpha, mitochondrial | ATP synthase subunit beta, mitochondrial | ATP synthase subunit gamma, mitochondrial |
---|---|---|---|
ID: | ATPA_BOVIN | ATPB_BOVIN | ATPG_BOVIN |
AC: | P19483 | P00829 | P05631 |
Organism: | Bos taurus | ||
Reign: | Eukaryota | ||
TaxID: | 9913 | ||
EC Number: | / | 3.6.3.14 | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 17 % |
C | 20 % |
E | 7 % |
F | 20 % |
G | 37 % |
B-Factor: | 21.864 |
---|---|
Number of residues: | 31 |
Including | |
Standard Amino Acids: | 30 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.167 | 486.000 |
% Hydrophobic | % Polar |
---|---|
59.72 | 40.28 |
According to VolSite |
HET Code: | PIT |
---|---|
Formula: | C14H12O4 |
Molecular weight: | 244.243 g/mol |
DrugBank ID: | DB08399 |
Buried Surface Area: | 63.1 % |
Polar Surface area: | 80.92 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 4 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-5.93561 | 24.9512 | 8.8935 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C3 | CB | ALA- 256 | 3.71 | 0 | Hydrophobic |
C1 | CB | THR- 259 | 4.16 | 0 | Hydrophobic |
C9 | CG | LYS- 260 | 3.39 | 0 | Hydrophobic |
C14 | CB | ILE- 263 | 3.71 | 0 | Hydrophobic |
C12 | CG | GLU- 264 | 3.84 | 0 | Hydrophobic |
C11 | CB | ALA- 278 | 4.28 | 0 | Hydrophobic |
C10 | CG2 | VAL- 279 | 3.71 | 0 | Hydrophobic |
C3 | CG | ARG- 291 | 3.78 | 0 | Hydrophobic |
O3 | N | GLU- 292 | 2.83 | 128.52 | H-Bond (Protein Donor) |
C2 | CG | GLU- 292 | 4.04 | 0 | Hydrophobic |
O2 | O | HOH- 2056 | 3.02 | 143.87 | H-Bond (Protein Donor) |