2.800 Å
X-ray
2001-05-09
| Name: | ATP-dependent protease ATPase subunit HslU |
|---|---|
| ID: | HSLU_HAEIN |
| AC: | P43773 |
| Organism: | Haemophilus influenzae |
| Reign: | Bacteria |
| TaxID: | 71421 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 29.465 |
|---|---|
| Number of residues: | 34 |
| Including | |
| Standard Amino Acids: | 34 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.093 | 637.875 |
| % Hydrophobic | % Polar |
|---|---|
| 40.21 | 59.79 |
| According to VolSite | |

| HET Code: | ADP |
|---|---|
| Formula: | C10H12N5O10P2 |
| Molecular weight: | 424.177 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 67.86 % |
| Polar Surface area: | 260.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 14 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| 29.0567 | 23.627 | 19.7806 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| N1 | N | ILE- 18 | 2.63 | 164.11 | H-Bond (Protein Donor) |
| O1B | N | GLY- 60 | 3.36 | 125.75 | H-Bond (Protein Donor) |
| O1B | N | VAL- 61 | 3.46 | 130.1 | H-Bond (Protein Donor) |
| N6 | O | VAL- 61 | 3.44 | 142.66 | H-Bond (Ligand Donor) |
| O3A | N | GLY- 62 | 3.23 | 133.79 | H-Bond (Protein Donor) |
| O1B | NZ | LYS- 63 | 2.67 | 154.51 | H-Bond (Protein Donor) |
| O1B | N | LYS- 63 | 3.32 | 140.44 | H-Bond (Protein Donor) |
| O1B | NZ | LYS- 63 | 2.67 | 0 | Ionic (Protein Cationic) |
| O1A | N | THR- 64 | 3.32 | 120.64 | H-Bond (Protein Donor) |
| O3A | N | THR- 64 | 3.49 | 146.93 | H-Bond (Protein Donor) |
| O2A | N | GLU- 65 | 2.91 | 148.48 | H-Bond (Protein Donor) |
| C2' | CG | GLU- 65 | 4.38 | 0 | Hydrophobic |
| C1' | CB | ALA- 393 | 3.68 | 0 | Hydrophobic |
| O3B | CZ | ARG- 394 | 3.47 | 0 | Ionic (Protein Cationic) |
| C4' | CG | ARG- 394 | 4.25 | 0 | Hydrophobic |