2.400 Å
X-ray
2000-08-25
| Name: | ATP synthase subunit alpha, mitochondrial | ATP synthase subunit beta, mitochondrial |
|---|---|---|
| ID: | ATPA_BOVIN | ATPB_BOVIN |
| AC: | P19483 | P00829 |
| Organism: | Bos taurus | |
| Reign: | Eukaryota | |
| TaxID: | 9913 | |
| EC Number: | / | 3.6.3.14 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 74 % |
| D | 26 % |
| B-Factor: | 43.313 |
|---|---|
| Number of residues: | 35 |
| Including | |
| Standard Amino Acids: | 34 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.585 | 877.500 |
| % Hydrophobic | % Polar |
|---|---|
| 38.85 | 61.15 |
| According to VolSite | |

| HET Code: | ATP |
|---|---|
| Formula: | C10H12N5O13P3 |
| Molecular weight: | 503.149 g/mol |
| DrugBank ID: | DB00171 |
| Buried Surface Area: | 50.29 % |
| Polar Surface area: | 319.88 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 17 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| 95.2706 | 66.0408 | 41.4555 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1G | N | GLN- 172 | 3.22 | 153.71 | H-Bond (Protein Donor) |
| O3B | N | GLN- 172 | 2.84 | 129.34 | H-Bond (Protein Donor) |
| O1B | N | THR- 173 | 3.22 | 129.14 | H-Bond (Protein Donor) |
| O1B | N | GLY- 174 | 3.1 | 129.57 | H-Bond (Protein Donor) |
| O3A | N | GLY- 174 | 2.9 | 135.13 | H-Bond (Protein Donor) |
| O1B | N | LYS- 175 | 2.79 | 158.61 | H-Bond (Protein Donor) |
| O1B | NZ | LYS- 175 | 2.98 | 170.94 | H-Bond (Protein Donor) |
| O1B | NZ | LYS- 175 | 2.98 | 0 | Ionic (Protein Cationic) |
| O2B | N | THR- 176 | 2.93 | 169.08 | H-Bond (Protein Donor) |
| O1A | OG | SER- 177 | 2.72 | 149.11 | H-Bond (Protein Donor) |
| O1A | N | SER- 177 | 2.92 | 156.74 | H-Bond (Protein Donor) |
| C4' | CZ | PHE- 357 | 4.24 | 0 | Hydrophobic |
| C1' | CZ | PHE- 357 | 4.24 | 0 | Hydrophobic |
| N6 | O | GLN- 430 | 2.91 | 171.21 | H-Bond (Ligand Donor) |
| O2' | OE1 | GLN- 432 | 2.56 | 155.15 | H-Bond (Ligand Donor) |
| O2G | MG | MG- 601 | 2.08 | 0 | Metal Acceptor |
| O2B | MG | MG- 601 | 2.09 | 0 | Metal Acceptor |