2.500 Å
X-ray
1999-01-15
| Name: | Myosin heavy chain, striated muscle |
|---|---|
| ID: | MYS_ARGIR |
| AC: | P24733 |
| Organism: | Argopecten irradians |
| Reign: | Eukaryota |
| TaxID: | 31199 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 35.579 |
|---|---|
| Number of residues: | 34 |
| Including | |
| Standard Amino Acids: | 33 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.044 | 577.125 |
| % Hydrophobic | % Polar |
|---|---|
| 33.33 | 66.67 |
| According to VolSite | |

| HET Code: | ADP |
|---|---|
| Formula: | C10H12N5O10P2 |
| Molecular weight: | 424.177 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 63.62 % |
| Polar Surface area: | 260.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 14 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| 2.947 | -10.1497 | 0.00588889 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O4' | ND2 | ASN- 124 | 2.87 | 164.46 | H-Bond (Protein Donor) |
| C1' | CD1 | TYR- 126 | 4.36 | 0 | Hydrophobic |
| N6 | OH | TYR- 132 | 2.97 | 153.17 | H-Bond (Ligand Donor) |
| O3B | N | GLY- 179 | 2.98 | 152.88 | H-Bond (Protein Donor) |
| O2B | N | GLY- 181 | 3.02 | 165.58 | H-Bond (Protein Donor) |
| O2B | N | LYS- 182 | 2.75 | 141.24 | H-Bond (Protein Donor) |
| O2B | NZ | LYS- 182 | 2.91 | 150.08 | H-Bond (Protein Donor) |
| O2B | NZ | LYS- 182 | 2.91 | 0 | Ionic (Protein Cationic) |
| O3B | NZ | LYS- 182 | 3.84 | 0 | Ionic (Protein Cationic) |
| O1B | N | THR- 183 | 2.9 | 159.32 | H-Bond (Protein Donor) |
| O2A | N | GLU- 184 | 2.8 | 168.67 | H-Bond (Protein Donor) |
| C3' | CG | GLU- 184 | 4.03 | 0 | Hydrophobic |
| O3B | ND2 | ASN- 237 | 3.14 | 120.75 | H-Bond (Protein Donor) |
| O1A | ND2 | ASN- 237 | 3 | 163.47 | H-Bond (Protein Donor) |
| O1B | MG | MG- 836 | 2.12 | 0 | Metal Acceptor |