2.940 Å
X-ray
2014-04-29
| Name: | Phosphatidylinositol 4-kinase beta |
|---|---|
| ID: | PI4KB_HUMAN |
| AC: | Q9UBF8 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | 2.7.1.67 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 57.141 |
|---|---|
| Number of residues: | 30 |
| Including | |
| Standard Amino Acids: | 30 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.115 | 1566.000 |
| % Hydrophobic | % Polar |
|---|---|
| 43.32 | 56.68 |
| According to VolSite | |

| HET Code: | 093 |
|---|---|
| Formula: | C14H16ClN3O4S2 |
| Molecular weight: | 389.878 g/mol |
| DrugBank ID: | DB06836 |
| Buried Surface Area: | 54.76 % |
| Polar Surface area: | 141.54 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 7 |
| H-Bond Donors: | 3 |
| Rings: | 2 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| 7.69287 | 335.357 | 8.86433 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| SAP | CD1 | ILE- 547 | 3.65 | 0 | Hydrophobic |
| CAG | CD1 | ILE- 547 | 3.5 | 0 | Hydrophobic |
| CAE | CG | TYR- 583 | 3.63 | 0 | Hydrophobic |
| CL | CD1 | ILE- 595 | 3.98 | 0 | Hydrophobic |
| CAD | CG2 | ILE- 595 | 4.28 | 0 | Hydrophobic |
| CAE | CG2 | ILE- 595 | 4 | 0 | Hydrophobic |
| CAB | CD1 | ILE- 595 | 3.81 | 0 | Hydrophobic |
| CAE | CB | PRO- 597 | 4.42 | 0 | Hydrophobic |
| SAP | CB | PRO- 597 | 4.27 | 0 | Hydrophobic |
| NAK | N | VAL- 598 | 2.88 | 128.25 | H-Bond (Protein Donor) |
| SAP | CD2 | LEU- 663 | 4.05 | 0 | Hydrophobic |
| CAE | CG2 | ILE- 673 | 4.47 | 0 | Hydrophobic |
| CAD | CB | ILE- 673 | 3.57 | 0 | Hydrophobic |
| CAH | CD1 | ILE- 673 | 3.92 | 0 | Hydrophobic |