2.940 Å
X-ray
2014-04-29
Name: | Phosphatidylinositol 4-kinase beta |
---|---|
ID: | PI4KB_HUMAN |
AC: | Q9UBF8 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.1.67 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 57.141 |
---|---|
Number of residues: | 30 |
Including | |
Standard Amino Acids: | 30 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.115 | 1566.000 |
% Hydrophobic | % Polar |
---|---|
43.32 | 56.68 |
According to VolSite |
HET Code: | 093 |
---|---|
Formula: | C14H16ClN3O4S2 |
Molecular weight: | 389.878 g/mol |
DrugBank ID: | DB06836 |
Buried Surface Area: | 54.76 % |
Polar Surface area: | 141.54 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
7.69287 | 335.357 | 8.86433 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
SAP | CD1 | ILE- 547 | 3.65 | 0 | Hydrophobic |
CAG | CD1 | ILE- 547 | 3.5 | 0 | Hydrophobic |
CAE | CG | TYR- 583 | 3.63 | 0 | Hydrophobic |
CL | CD1 | ILE- 595 | 3.98 | 0 | Hydrophobic |
CAD | CG2 | ILE- 595 | 4.28 | 0 | Hydrophobic |
CAE | CG2 | ILE- 595 | 4 | 0 | Hydrophobic |
CAB | CD1 | ILE- 595 | 3.81 | 0 | Hydrophobic |
CAE | CB | PRO- 597 | 4.42 | 0 | Hydrophobic |
SAP | CB | PRO- 597 | 4.27 | 0 | Hydrophobic |
NAK | N | VAL- 598 | 2.88 | 128.25 | H-Bond (Protein Donor) |
SAP | CD2 | LEU- 663 | 4.05 | 0 | Hydrophobic |
CAE | CG2 | ILE- 673 | 4.47 | 0 | Hydrophobic |
CAD | CB | ILE- 673 | 3.57 | 0 | Hydrophobic |
CAH | CD1 | ILE- 673 | 3.92 | 0 | Hydrophobic |