sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.475 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.467 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.464 | |
| 3kve | FAD | L-amino-acid oxidase | / | 1.286 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.221 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.153 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.103 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 1.092 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.957 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.927 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.925 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.921 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.918 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.901 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.896 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.891 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.891 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.882 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.874 | |
| 3qj4 | FAD | Renalase | / | 0.869 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.866 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.859 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.858 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.849 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.848 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.846 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.845 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.841 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.841 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.840 | |
| 3ukk | FDA | UDP-galactopyranose mutase | / | 0.840 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.838 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.838 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.838 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.835 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.832 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.828 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.825 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.822 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.819 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.819 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.816 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.815 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.814 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.811 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.808 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.808 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.807 | |
| 3kkj | FAD | Renalase | / | 0.807 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.806 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.804 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.803 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.801 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.797 | |
| 1f3p | FAD | Ferredoxin reductase | / | 0.797 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.795 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.795 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.788 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.786 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.784 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.780 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.778 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.777 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.777 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.770 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.769 | |
| 2bi7 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.768 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.768 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.763 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.763 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.762 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.761 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.760 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.759 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.759 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.759 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.758 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.758 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.758 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.758 | |
| 4ysh | FAD | Glycine oxidase | / | 0.758 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.757 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.754 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.752 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.751 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.749 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.749 | |
| 1onf | FAD | Glutathione reductase | 1.8.1.7 | 0.748 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.746 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.746 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.745 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.745 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.744 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.744 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.743 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.743 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.743 | |
| 3uka | FAD | UDP-galactopyranose mutase | / | 0.743 | |
| 4h4r | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.743 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.743 | |
| 4h4v | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.742 | |
| 2cul | FAD | GidA-related protein | / | 0.741 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.740 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.740 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.739 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.739 | |
| 1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.738 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.738 | |
| 3rha | FDA | Putrescine oxidase | / | 0.736 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.735 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.735 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.735 | |
| 4h4z | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.735 | |
| 1q1r | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.733 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.731 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.731 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.731 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.731 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.731 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.730 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.729 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.728 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.728 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 0.728 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.728 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.727 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.727 | |
| 2bab | FAD | Putative aminooxidase | / | 0.726 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.726 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.725 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.724 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.723 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.722 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.722 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.719 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.719 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.718 | |
| 3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.717 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.717 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.716 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.715 | |
| 2v3a | FAD | Rubredoxin-NAD(+) reductase | 1.18.1.1 | 0.714 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.714 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.713 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.713 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.712 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.710 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.710 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.709 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.709 | |
| 2yvf | FAD | Ferredoxin reductase | / | 0.709 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.709 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.709 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.708 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.708 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.708 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.708 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.708 | |
| 4tm3 | FAD | KtzI | / | 0.708 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.708 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.706 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.706 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.706 | |
| 3d72 | FAD | Vivid PAS protein VVD | / | 0.705 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.705 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.705 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.705 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.704 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.704 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.704 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.703 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.702 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.702 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.702 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.702 | |
| 4j33 | FAD | Kynurenine 3-monooxygenase | / | 0.702 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.701 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.701 | |
| 4j31 | FAD | Kynurenine 3-monooxygenase | / | 0.700 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.699 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.698 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.698 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.698 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 0.697 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.697 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.697 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.696 | |
| 4h4s | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.696 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.696 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.695 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.694 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.693 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.693 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.693 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.692 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.692 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.692 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.692 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.691 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.691 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.691 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.691 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.690 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.690 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.690 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.690 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.689 | |
| 2gmj | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.689 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.689 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.688 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.688 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.687 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.686 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.684 | |
| 3lb8 | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.684 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.683 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.683 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.683 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.682 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.682 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.682 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.682 | |
| 5hhf | FDA | UDP-galactopyranose mutase | / | 0.682 | |
| 1n9l | FMN | Putative blue light receptor | / | 0.681 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.681 | |
| 4bur | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.681 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.681 | |
| 3nix | FAD | Flavoprotein/dehydrogenase | / | 0.680 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.680 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.679 | |
| 2z6c | FMN | Phototropin-1 | 2.7.11.1 | 0.679 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.678 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.678 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.678 | |
| 1d7y | FAD | Ferredoxin reductase | / | 0.677 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.677 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.677 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.677 | |
| 3gd3 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.677 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.677 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.677 | |
| 4h4w | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.677 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.677 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.677 | |
| 2gqw | FAD | Ferredoxin reductase | / | 0.676 | |
| 2xvh | FAD | Putative flavin-containing monooxygenase | / | 0.676 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.676 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.675 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.675 | |
| 4x4j | FAD | Putative oxygenase | / | 0.675 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.674 | |
| 1phh | FAD | p-hydroxybenzoate hydroxylase | / | 0.674 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.674 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.674 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.674 | |
| 2isj | FMN | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.673 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.673 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.672 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.672 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.672 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.672 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.672 | |
| 4tlx | FDA | KtzI | / | 0.672 | |
| 5i39 | FAD | L-amino acid deaminase | / | 0.672 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.671 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.671 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.671 | |
| 5ahs | FAD | Acyl-CoA dehydrogenase | / | 0.671 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.671 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.670 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.669 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.669 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.668 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.668 | |
| 2bac | FAD | Putative aminooxidase | / | 0.668 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.668 | |
| 2xls | FAD | Putative flavin-containing monooxygenase | / | 0.668 | |
| 3a26 | MTA | tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase | / | 0.668 | |
| 4h4y | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.668 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.668 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.667 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.667 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.667 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.667 | |
| 3if9 | FAD | Glycine oxidase | 1.4.3.19 | 0.666 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.666 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.665 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.665 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.665 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.664 | |
| 4gdc | FAD | UDP-galactopyranose mutase | / | 0.664 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.663 | |
| 2ar8 | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.663 | |
| 3jsk | AHZ | Thiamine thiazole synthase | / | 0.663 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.663 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.663 | |
| 4h50 | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.663 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.662 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.662 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.662 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.662 | |
| 3znp | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.662 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.662 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.662 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.662 | |
| 1zy8 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.661 | |
| 2e48 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.661 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.661 | |
| 2z6d | FMN | Phototropin-2 | 2.7.11.1 | 0.661 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.661 | |
| 4gdd | FAD | UDP-galactopyranose mutase | / | 0.661 | |
| 4jy2 | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.661 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.660 | |
| 2dki | FAD | 3-hydroxybenzoate 4-monooxygenase | 1.14.13.23 | 0.660 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.660 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.660 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.659 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.659 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.659 | |
| 2ji7 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.658 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.657 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.657 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.657 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.657 | |
| 2isk | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.657 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.657 | |
| 1geu | NAD | Glutathione reductase | 1.8.1.7 | 0.656 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.656 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.656 | |
| 4ap3 | FAD | Steroid monooxygenase | / | 0.656 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.656 | |
| 5j3w | FMN | Sensory box protein | / | 0.656 | |
| 5jsc | FAD | Putative acyl-CoA dehydrogenase | / | 0.656 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.655 | |
| 3fmw | FAD | Oxygenase | / | 0.655 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.655 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.655 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.655 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.655 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.655 | |
| 1ek5 | NAD | UDP-glucose 4-epimerase | / | 0.654 | |
| 1uum | FMN | Dihydroorotate dehydrogenase (quinone), mitochondrial | 1.3.5.2 | 0.654 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.654 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.653 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.653 | |
| 2bry | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.653 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.653 | |
| 2vdv | SAM | tRNA (guanine-N(7)-)-methyltransferase | / | 0.653 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.653 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.653 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.653 | |
| 5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.653 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.653 | |
| 2gr1 | FAD | Ferredoxin reductase | / | 0.652 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.652 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.652 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.652 | |
| 4yus | FMN | Family 3 adenylate cyclase | / | 0.652 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.652 | |
| 5je2 | SAH | Methyl transferase | / | 0.652 | |
| 2xyo | FAD | TetX family tetracycline inactivation enzyme | / | 0.651 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.651 | |
| 3n39 | FMN | Protein NrdI | / | 0.651 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.650 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.650 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.650 |