sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 1.005 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 1.005 | |
| 4asu | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.921 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.914 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.905 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.905 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.890 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.890 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.888 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.888 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.883 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.883 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.869 | |
| 2fna | ADP | Uncharacterized protein | / | 0.869 | |
| 1wbb | ADP | DNA mismatch repair protein MutS | / | 0.853 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.850 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.847 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.847 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.847 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.841 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.838 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.836 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.832 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.827 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.826 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 0.826 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.826 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 0.825 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.825 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.823 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.822 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.821 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.821 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.820 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.820 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.820 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.820 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.820 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.818 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.817 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.817 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.816 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.815 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.815 | |
| 4tla | ADP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.815 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.814 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.813 | |
| 3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.813 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.811 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.811 | |
| 1h8h | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.811 | |
| 1h8h | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.811 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.811 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.811 | |
| 4lrw | GDP | GTPase KRas | / | 0.810 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.810 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.808 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.807 | |
| 4l8g | GDP | GTPase KRas | / | 0.807 | |
| 2zts | ADP | Uncharacterized protein | / | 0.806 | |
| 4obe | GDP | GTPase KRas | / | 0.806 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.805 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.805 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.805 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.805 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 0.805 | |
| 3ref | GDP | Rho family GTPase | / | 0.805 | |
| 2rgx | AP5 | Adenylate kinase | / | 0.804 | |
| 4l9s | GDP | GTPase HRas | / | 0.804 | |
| 4dso | GSP | GTPase KRas | / | 0.803 | |
| 4epw | GDP | GTPase KRas | / | 0.803 | |
| 4ldj | GDP | GTPase KRas | / | 0.802 | |
| 4luc | GDP | GTPase KRas | / | 0.802 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.802 | |
| 4ql3 | GDP | GTPase KRas | / | 0.802 | |
| 4tq9 | GDP | GTPase KRas | / | 0.802 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.801 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.801 | |
| 5cyo | GDP | Septin-9 | / | 0.801 | |
| 4epx | GDP | GTPase KRas | / | 0.800 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.800 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.800 | |
| 1xmv | ADP | Protein RecA | / | 0.799 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 0.799 | |
| 4xsg | GSP | Transforming protein RhoA | / | 0.799 | |
| 1e1q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.798 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.798 | |
| 2uyi | ADP | Kinesin-like protein KIF11 | / | 0.797 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.796 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.796 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.796 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.796 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.796 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.795 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.794 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.793 | |
| 2zfi | ADP | Kinesin-like protein KIF1A | / | 0.793 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.793 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.793 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.792 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.792 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.792 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.791 | |
| 4yer | ADP | Antibiotic ABC transporter, ATP-binding protein, putative | / | 0.791 | |
| 5ftc | ADP | TPR domain protein | / | 0.791 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.790 | |
| 1e1q | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.790 | |
| 1e1q | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.790 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.790 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.790 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 0.790 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.790 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.790 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.789 | |
| 2c5l | GTP | GTPase HRas | / | 0.789 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.789 | |
| 3l9h | ADP | Kinesin-like protein KIF11 | / | 0.788 | |
| 3mle | ADP | ATP-dependent dethiobiotin synthetase BioD | 6.3.3.3 | 0.788 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.787 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.787 | |
| 2fl2 | ADP | Kinesin-like protein KIF11 | / | 0.787 | |
| 3cob | ADP | Kinesin heavy chain-like protein | / | 0.787 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.787 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.787 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.785 | |
| 1xef | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.785 | |
| 3r9i | ADP | Septum site-determining protein MinD | / | 0.785 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.784 | |
| 4g0n | GNP | GTPase HRas | / | 0.784 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.784 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.783 | |
| 3kud | GDP | GTPase HRas | / | 0.783 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.781 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.781 | |
| 4k81 | GTP | GTPase HRas | / | 0.781 | |
| 4oi4 | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.781 | |
| 4yqf | GDP | Septin-9 | / | 0.781 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.781 | |
| 5bn3 | ADP | NEQ263 | / | 0.781 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.780 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.780 | |
| 3tlx | ADP | Adenylate kinase 2 | / | 0.780 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.780 | |
| 5fl3 | ADP | Pili retraction protein PilT | / | 0.780 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.779 | |
| 1in5 | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.779 | |
| 2ce2 | GDP | GTPase HRas | / | 0.779 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.779 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.779 | |
| 1fnn | ADP | ORC1-type DNA replication protein | / | 0.778 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.778 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.778 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.778 | |
| 1kmq | GNP | Transforming protein RhoA | / | 0.777 | |
| 2x7e | ADP | Kinesin-like protein KIF11 | / | 0.777 | |
| 2xae | ADP | Kinesin-like protein KIF11 | / | 0.777 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.777 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.777 | |
| 2jj1 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.776 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.776 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 0.776 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 0.775 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.775 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.775 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.775 | |
| 1fmw | ATP | Myosin-2 heavy chain | / | 0.774 | |
| 1w5s | ADP | ORC1-type DNA replication protein 2 | / | 0.774 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.774 | |
| 4gzm | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.774 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.774 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.774 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.773 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.773 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.773 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 0.773 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.772 | |
| 4tl7 | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.772 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.771 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.771 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.770 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.770 | |
| 3m0e | ATP | Transcriptional regulator (NtrC family) | / | 0.770 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.769 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 0.769 | |
| 1ny5 | ADP | Transcriptional regulator (NtrC family) | / | 0.768 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.768 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.768 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 0.768 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.768 | |
| 4jlo | ADP | Adenylate kinase | / | 0.768 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.768 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.767 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.767 | |
| 4ihq | ADP | Conserved Archaeal protein | / | 0.767 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.767 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.766 | |
| 4tl8 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.765 | |
| 4tlb | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.765 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.764 | |
| 4tlc | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.764 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.764 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.762 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.762 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.762 | |
| 4ncl | GDP | Eukaryotic translation initiation factor 5B | / | 0.762 | |
| 1ayl | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.761 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.761 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.761 | |
| 2g1q | ADP | Kinesin-like protein KIF11 | / | 0.760 | |
| 2r9v | ATP | ATP synthase subunit alpha | / | 0.760 | |
| 3fmo | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.760 | |
| 4b7b | ADP | Kinesin-like protein KIF11 | / | 0.760 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 0.760 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.760 | |
| 1ake | AP5 | Adenylate kinase | / | 0.759 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.759 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.759 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.759 | |
| 3ftq | GNP | Septin-2 | / | 0.759 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.758 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.758 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.757 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.757 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.757 | |
| 2cl6 | CAG | GTPase HRas | / | 0.756 | |
| 2o8b | ADP | DNA mismatch repair protein Msh2 | / | 0.756 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.756 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.756 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.756 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.756 | |
| 4d81 | ADP | AAA ATPase, central domain protein | / | 0.756 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.756 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.756 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.755 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.755 | |
| 4dsu | GDP | GTPase KRas | / | 0.755 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.754 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.754 | |
| 4ag5 | ADP | Type IV secretory pathway VirB4 components-like protein | / | 0.754 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.754 | |
| 4zca | ADP | Kinesin-like protein KIF11 | / | 0.754 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.753 | |
| 2rgb | GNP | GTPase HRas | / | 0.753 | |
| 2rge | GNP | GTPase HRas | / | 0.753 | |
| 3i3s | GNP | GTPase HRas | / | 0.753 | |
| 3k8y | GNP | GTPase HRas | / | 0.753 | |
| 3lbh | GNP | GTPase HRas | / | 0.753 | |
| 3oiu | GNP | GTPase HRas | / | 0.753 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.753 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 0.753 | |
| 3oiw | GNP | GTPase HRas | / | 0.752 | |
| 3rs0 | GNP | GTPase HRas | / | 0.752 | |
| 3rs4 | GNP | GTPase HRas | / | 0.752 | |
| 3rs5 | GNP | GTPase HRas | / | 0.752 | |
| 4dlv | GNP | GTPase HRas | / | 0.752 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 0.752 | |
| 4l9w | GNP | GTPase HRas | / | 0.752 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 0.752 | |
| 4nyj | GNP | GTPase HRas | / | 0.752 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.751 | |
| 2rgc | GNP | GTPase HRas | / | 0.751 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.751 | |
| 3moh | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.751 | |
| 3rs7 | GNP | GTPase HRas | / | 0.751 | |
| 3v4f | GNP | GTPase HRas | / | 0.751 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.751 | |
| 4dls | GNP | GTPase HRas | / | 0.751 | |
| 4dlz | GNP | GTPase HRas | / | 0.751 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.750 | |
| 4mkh | AP5 | Adenylate kinase | / | 0.750 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.750 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.750 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.749 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.749 | |
| 3d8b | ADP | Fidgetin-like protein 1 | 3.6.4 | 0.749 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.749 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.748 | |
| 1z6t | ADP | Apoptotic protease-activating factor 1 | / | 0.747 | |
| 4ike | ADP | Adenylate kinase | / | 0.747 | |
| 4jld | ADP | Adenylate kinase | / | 0.747 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.746 | |
| 4iei | ADP | Gene 2 protein | / | 0.746 | |
| 1e4v | AP5 | Adenylate kinase | / | 0.745 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.745 | |
| 3k3b | ADP | Kinesin-like protein KIF11 | / | 0.745 | |
| 4dvg | GSP | Rho family GTPase | / | 0.745 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 0.745 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.744 | |
| 4dsn | GCP | GTPase KRas | / | 0.744 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.743 | |
| 3pfi | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.742 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.742 | |
| 4tl6 | ANP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.742 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.741 | |
| 4mit | GTP | Rho-related protein racC | / | 0.741 | |
| 2eck | ADP | Adenylate kinase | / | 0.740 | |
| 2olq | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.740 | |
| 2rgg | GNP | GTPase HRas | / | 0.740 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 0.740 | |
| 3kji | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.739 | |
| 4xvq | GNP | GTPase HRas | / | 0.739 | |
| 3ddc | GNP | GTPase HRas | / | 0.738 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.738 | |
| 3tif | ADP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.738 | |
| 4dlt | GNP | GTPase HRas | / | 0.738 | |
| 1e4y | AP5 | Adenylate kinase | / | 0.737 | |
| 2gks | ADP | Probable bifunctional SAT/APS kinase | 2.7.1.25 | 0.737 | |
| 3ieu | GDP | GTPase Era | / | 0.737 | |
| 3l8y | GNP | GTPase HRas | / | 0.737 | |
| 4dlw | GNP | GTPase HRas | / | 0.737 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.737 | |
| 5b2z | GNP | GTPase HRas | / | 0.737 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.736 | |
| 3c41 | ANP | Amino acid ABC transporter | / | 0.736 | |
| 3rsl | GNP | GTPase HRas | / | 0.736 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.736 | |
| 4dlx | GNP | GTPase HRas | / | 0.736 | |
| 4jl5 | ADP | Adenylate kinase | / | 0.736 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.736 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.736 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.735 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.735 | |
| 3lbi | GNP | GTPase HRas | / | 0.735 | |
| 4hse | ADP | Chaperone protein ClpB | / | 0.735 | |
| 4jky | ADP | Adenylate kinase | / | 0.735 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.734 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.734 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.734 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.734 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.733 | |
| 2c9c | ATP | Psp operon transcriptional activator | / | 0.733 | |
| 3thy | ADP | DNA mismatch repair protein Msh2 | / | 0.733 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.732 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.732 | |
| 2zrj | AGS | Protein RecA | / | 0.732 | |
| 3l1c | ADP | Protein claret segregational | / | 0.732 | |
| 1ohh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.730 | |
| 1ohh | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.730 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.730 | |
| 4q03 | GDP | GTPase KRas | / | 0.730 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.730 | |
| 2dr3 | ADP | UPF0273 protein PH0284 | / | 0.729 | |
| 2vf7 | ADP | UvrABC system protein A | / | 0.729 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 0.729 | |
| 1g6o | ADP | Cag alpha | / | 0.728 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.728 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.727 | |
| 3tgp | GNP | GTPase HRas | / | 0.726 | |
| 4ap0 | ADP | Kinesin-like protein KIF11 | / | 0.726 | |
| 4xjx | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.726 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.725 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.725 | |
| 1ank | ANP | Adenylate kinase | / | 0.724 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.724 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.724 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.724 | |
| 4db1 | ANP | Myosin-7 | / | 0.724 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 0.723 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.723 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.723 | |
| 1nly | AGS | Cag alpha | / | 0.722 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.722 | |
| 1xnj | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | 2.7.1.25 | 0.721 | |
| 3k1j | ADP | ATP-dependent protease Lon | / | 0.721 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.721 | |
| 4i1v | ADP | Dephospho-CoA kinase | / | 0.721 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.720 | |
| 4x8l | AP5 | Adenylate kinase | / | 0.720 | |
| 2ax4 | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 | 2.7.1.25 | 0.719 | |
| 4a51 | ADP | Kinesin-like protein KIF11 | / | 0.719 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.719 | |
| 1f5n | GNP | Guanylate-binding protein 1 | / | 0.718 | |
| 1sxj | ADP | Replication factor C subunit 5 | / | 0.718 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.718 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.718 | |
| 4rz3 | ADP | Site-determining protein | / | 0.718 | |
| 1i4l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.717 | |
| 1r0z | ATP | Cystic fibrosis transmembrane conductance regulator | / | 0.717 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.717 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.717 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.717 | |
| 4iok | ADP | Formate--tetrahydrofolate ligase | / | 0.717 | |
| 2j7p | GNP | Signal recognition particle protein | / | 0.716 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 0.716 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.716 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.715 | |
| 3k9l | GNP | GTPase HRas | / | 0.715 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.715 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.714 | |
| 2zpa | ADP | tRNA(Met) cytidine acetyltransferase TmcA | / | 0.714 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.713 | |
| 2dwp | ACP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.713 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.713 | |
| 3lbn | GNP | GTPase HRas | / | 0.713 | |
| 4ww0 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.713 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.712 | |
| 4cei | ANP | ATP-dependent helicase/deoxyribonuclease subunit B | 3.1 | 0.712 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.711 | |
| 4xvu | ATP | ATPase GET3 | / | 0.711 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 0.709 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.709 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.708 | |
| 3pyz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.708 | |
| 4ko8 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.708 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.707 | |
| 2aky | AP5 | Adenylate kinase | / | 0.707 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.707 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.706 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.706 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.706 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 0.704 | |
| 5k5z | ANP | Uncharacterized protein | / | 0.703 | |
| 1xms | ANP | Protein RecA | / | 0.702 | |
| 4r9u | ANP | Vitamin B12 import ATP-binding protein BtuD | / | 0.701 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.699 | |
| 3zl8 | ADP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.699 | |
| 2db3 | ANP | ATP-dependent RNA helicase vasa, isoform A | 3.6.4.13 | 0.698 | |
| 2osb | AP5 | Adenylate kinase | / | 0.698 | |
| 3i5x | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.698 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.697 | |
| 2zro | ADP | Protein RecA | / | 0.697 | |
| 4lv6 | GDP | GTPase KRas | / | 0.697 | |
| 1ofh | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.696 | |
| 1y3a | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.696 | |
| 2uz3 | TTP | Thymidine kinase | / | 0.695 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.695 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.694 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.694 | |
| 3oiv | GNP | GTPase HRas | / | 0.694 | |
| 2pc9 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.693 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.692 | |
| 3a4l | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.692 | |
| 3sqw | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.692 | |
| 1bif | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.691 | |
| 1lfd | GNP | GTPase HRas | / | 0.691 | |
| 3qbv | GDP | Cell division control protein 42 homolog | / | 0.691 | |
| 5cyp | GSP | Septin-9 | / | 0.691 | |
| 1l2t | ATP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.690 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.690 | |
| 1xd9 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.690 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 0.690 | |
| 4idp | GNP | Atlastin-1 | 3.6.5 | 0.690 | |
| 4ma4 | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.690 | |
| 4nyi | GNP | GTPase HRas | / | 0.690 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.689 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.688 | |
| 4bec | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.686 | |
| 2bbw | GP5 | Adenylate kinase 4, mitochondrial | / | 0.685 | |
| 2fgk | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.685 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.685 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.685 | |
| 4ww4 | ADP | RuvB-like helicase | / | 0.684 | |
| 1w7i | ADP | Unconventional myosin-Va | / | 0.683 | |
| 2whx | ADP | Genome polyprotein | 3.4.21.91 | 0.683 | |
| 2axn | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | / | 0.682 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.682 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 0.682 | |
| 2zet | GTP | Ras-related protein Rab-27B | / | 0.681 | |
| 4o3m | ADP | Bloom syndrome protein | 3.6.4.12 | 0.681 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.680 | |
| 1a4r | GNH | Cell division control protein 42 homolog | / | 0.679 | |
| 1ht2 | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.679 | |
| 2ad5 | ADP | CTP synthase | / | 0.679 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.679 | |
| 3hpr | AP5 | Adenylate kinase | / | 0.679 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 0.677 | |
| 1s3g | AP5 | Adenylate kinase | / | 0.677 | |
| 1xkv | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.676 | |
| 3bxz | ADP | Protein translocase subunit SecA | / | 0.676 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.674 | |
| 2vos | ADP | Folylpolyglutamate synthase | / | 0.674 | |
| 4l16 | ADP | Fidgetin-like protein 1 | 3.6.4 | 0.674 | |
| 4wpu | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.674 | |
| 5ftf | ADP | TPR domain protein | / | 0.673 | |
| 1n6m | ADP | Protein claret segregational | / | 0.672 | |
| 1njf | ADP | DNA polymerase III subunit tau | 2.7.7.7 | 0.672 | |
| 1l2o | ADP | Myosin heavy chain, striated muscle | / | 0.670 | |
| 3sop | GDP | Neuronal-specific septin-3 | / | 0.669 | |
| 2i1v | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.668 | |
| 3qi2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.667 | |
| 4q02 | GDP | GTPase KRas | / | 0.667 | |
| 5da9 | AGS | Uncharacterized protein | / | 0.667 | |
| 1kqm | ANP | Myosin heavy chain, striated muscle | / | 0.666 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.665 | |
| 2bif | ANP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.665 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.665 | |
| 4wa7 | GDP | GTPase KRas | / | 0.665 | |
| 1ii6 | ADP | Kinesin-like protein KIF11 | / | 0.664 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.664 | |
| 2dft | ADP | Shikimate kinase | 2.7.1.71 | 0.663 | |
| 3r9x | GNP | GTPase Era | / | 0.663 | |
| 2q2z | ADP | Kinesin-like protein KIF11 | / | 0.662 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.662 | |
| 4cvm | ANP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.662 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.662 | |
| 2vor | ACP | Folylpolyglutamate synthase | / | 0.661 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.661 | |
| 1nsf | ATP | Vesicle-fusing ATPase | 3.6.4.6 | 0.660 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.660 | |
| 4be7 | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.660 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.659 | |
| 3qpv | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.659 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.658 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 0.657 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.657 | |
| 4fvr | ATP | Tyrosine-protein kinase JAK2 | / | 0.657 | |
| 5dac | AGS | Uncharacterized protein | / | 0.657 | |
| 2c9o | ADP | RuvB-like 1 | 3.6.4.12 | 0.656 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.655 | |
| 3c15 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.654 | |
| 1nbm | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.653 | |
| 3kjg | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.653 | |
| 4c30 | ANP | DNA helicase | / | 0.653 | |
| 1im2 | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.652 | |
| 1dj3 | GDP | Adenylosuccinate synthetase, chloroplastic | / | 0.651 | |
| 2cft | PLP | Pyridoxal phosphate phosphatase | / | 0.651 | |
| 2nmv | ADP | UvrABC system protein B | / | 0.651 | |
| 2npi | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.651 | |
| 3vtk | ADP | Thymidine kinase | / | 0.650 |