Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2ioa | ADP | Bifunctional glutathionylspermidine synthetase/amidase |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 2ioa | ADP | Bifunctional glutathionylspermidine synthetase/amidase | / | 1.000 | |
| 2io8 | ADP | Bifunctional glutathionylspermidine synthetase/amidase | / | 0.565 | |
| 2a19 | ANP | Interferon-induced, double-stranded RNA-activated protein kinase | 2.7.11.1 | 0.535 | |
| 1x8b | 824 | Wee1-like protein kinase | 2.7.10.2 | 0.522 | |
| 2o7p | NAP | Riboflavin biosynthesis protein RibD | / | 0.521 | |
| 5iqg | GDP | Bifunctional AAC/APH | 2.3.1 | 0.512 | |
| 5iqa | GNP | Bifunctional AAC/APH | 2.3.1 | 0.505 | |
| 1id0 | ANP | Sensor protein PhoQ | 2.7.13.3 | 0.503 | |
| 4a4o | 664 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.501 | |
| 1yqj | 6NP | Mitogen-activated protein kinase 14 | / | 0.498 | |
| 1i2c | UPG | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.497 | |
| 4xzj | NAD | Putative NAD(+)--arginine ADP-ribosyltransferase Vis | 2.4.2.31 | 0.496 | |
| 2xrl | DXT | Tetracycline repressor protein class D | / | 0.495 | |
| 3bi6 | 396 | Wee1-like protein kinase | 2.7.10.2 | 0.495 | |
| 2cah | NDP | Catalase | 1.11.1.6 | 0.494 | |
| 2in6 | 839 | Wee1-like protein kinase | 2.7.10.2 | 0.494 | |
| 5iqb | GNP | Bifunctional AAC/APH | 2.3.1 | 0.494 | |
| 2b9i | ADP | Mitogen-activated protein kinase FUS3 | 2.7.11.24 | 0.493 | |
| 1qrr | UPG | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.492 | |
| 5byl | GCP | Bifunctional AAC/APH | 2.3.1 | 0.492 | |
| 1hfq | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.491 | |
| 3hko | ANP | Calcium/calmodulin-dependent protein kinase with a kinase domain and 2 calmodulin-like EF hands | / | 0.491 | |
| 5iqe | GNP | Bifunctional AAC/APH | 2.3.1 | 0.491 | |
| 1gox | FMN | Peroxisomal (S)-2-hydroxy-acid oxidase | 1.1.3.15 | 0.490 | |
| 2b9f | ADP | Mitogen-activated protein kinase FUS3 | 2.7.11.24 | 0.490 | |
| 5cvh | ADP | Casein kinase II subunit alpha | 2.7.11.1 | 0.490 | |
| 4bkj | STI | Epithelial discoidin domain-containing receptor 1 | 2.7.10.1 | 0.489 | |
| 5iqi | GNP | Bifunctional AAC/APH | 2.3.1 | 0.487 | |
| 3nsz | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.486 | |
| 4yek | THM | Thymidine phosphorylase | / | 0.486 | |
| 4eix | NIM | Phospholipase A2 VRV-PL-VIIIa | / | 0.484 | |
| 2zdt | 46C | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.483 | |
| 1i2b | NAD | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.482 | |
| 1ne4 | RP1 | cAMP-dependent protein kinase type I-alpha regulatory subunit | / | 0.482 | |
| 2j9g | ADP | Biotin carboxylase | 6.3.4.14 | 0.482 | |
| 2z2w | 770 | Wee1-like protein kinase | 2.7.10.2 | 0.482 | |
| 4f1o | ACP | Probable serine/threonine-protein kinase roco4 | 2.7.11.1 | 0.481 | |
| 2bak | AQZ | Mitogen-activated protein kinase 14 | / | 0.480 | |
| 2e20 | B4P | Propionate kinase | / | 0.480 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.480 | |
| 3d5w | ADP | Serine/threonine-protein kinase PLK | / | 0.480 | |
| 4a9y | AQZ | Mitogen-activated protein kinase 14 | / | 0.480 | |
| 1y5x | E89 | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.479 | |
| 2xkd | T3M | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.479 | |
| 4ckr | DI1 | Epithelial discoidin domain-containing receptor 1 | 2.7.10.1 | 0.479 | |
| 4f1m | ACP | Probable serine/threonine-protein kinase roco4 | 2.7.11.1 | 0.479 | |
| 2pul | ACP | Methylthioribose kinase | 2.7.1.100 | 0.478 | |
| 4d7m | TDC | Tetracycline repressor protein class D | / | 0.478 | |
| 5iqd | GNP | Bifunctional AAC/APH | 2.3.1 | 0.478 | |
| 1iah | ADP | Transient receptor potential cation channel subfamily M member 7 | 2.7.11.1 | 0.476 | |
| 1r8q | AFB | Cytohesin-2 | / | 0.476 | |
| 1r8q | AFB | ADP-ribosylation factor 1 | / | 0.476 | |
| 3ae4 | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.476 | |
| 3hzi | ATP | Serine/threonine-protein kinase toxin HipA | / | 0.476 | |
| 3prf | FP3 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.476 | |
| 4aut | FAD | Decaprenylphosphoryl-beta-D-ribose oxidase | / | 0.476 | |
| 4y6u | UPG | Glucosyl-3-phosphoglycerate synthase | 2.4.1.266 | 0.475 | |
| 2j9l | ATP | H(+)/Cl(-) exchange transporter 5 | / | 0.474 | |
| 2pup | ADP | Methylthioribose kinase | 2.7.1.100 | 0.474 | |
| 2w5a | ADP | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.474 | |
| 1ftl | DNQ | Glutamate receptor 2 | / | 0.473 | |
| 2glx | NDP | 1,5-anhydro-D-fructose reductase | / | 0.473 | |
| 2nnl | NAP | Dihydroflavonol 4-reductase | 1.1.1.219 | 0.473 | |
| 3up0 | D7S | aceDAF-12 | / | 0.473 | |
| 4bix | ADP | Sensor histidine kinase CpxA | / | 0.472 | |
| 4dpd | DHF | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.472 | |
| 4oa9 | ANP | Protein BRASSINOSTEROID INSENSITIVE 1 | 2.7.10.1 | 0.471 | |
| 1ib0 | FAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.470 | |
| 3nrr | D16 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.470 | |
| 2o7o | DXT | Tetracycline repressor protein class D | / | 0.469 | |
| 4e37 | NDP | Catalase | 1.11.1.6 | 0.469 | |
| 4lrj | ANP | Uncharacterized protein | / | 0.469 | |
| 3ppk | FNI | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.468 | |
| 3tqx | PLP | 2-amino-3-ketobutyrate coenzyme A ligase | / | 0.468 | |
| 4bgb | ADP | Predicted molecular chaperone distantly related to HSP70-fold metalloproteases | / | 0.468 | |
| 4i6h | 1C8 | Serine/threonine-protein kinase PLK2 | 2.7.11.21 | 0.468 | |
| 2geu | COK | Pantothenate kinase | 2.7.1.33 | 0.467 | |
| 2vkd | UPG | Cytotoxin L | / | 0.467 | |
| 4gvj | ADP | Non-receptor tyrosine-protein kinase TYK2 | 2.7.10.2 | 0.467 | |
| 2a5k | AZP | Replicase polyprotein 1ab | 3.4.22 | 0.466 | |
| 3kzo | AN0 | N-acetylornithine carbamoyltransferase | 2.1.3.9 | 0.466 | |
| 4jr7 | GNP | Casein kinase II subunit alpha | 2.7.11.1 | 0.466 | |
| 4y12 | AGS | Serine/threonine-protein kinase PknG | 2.7.11.1 | 0.466 | |
| 1h51 | FMN | Pentaerythritol tetranitrate reductase | / | 0.465 | |
| 3dat | MTX | Dihydrofolate reductase | / | 0.465 | |
| 3q60 | ATP | Rhoptry protein 5B | / | 0.465 | |
| 3v0o | 4GW | Histo-blood group ABO system transferase | / | 0.465 | |
| 4k5o | 1OT | M1 family aminopeptidase | 3.4.11 | 0.465 | |
| 5fkm | TDC | Tetracycline repressor protein class D | / | 0.465 | |
| 1vyr | FMN | Pentaerythritol tetranitrate reductase | / | 0.464 | |
| 1zyd | ATP | eIF-2-alpha kinase GCN2 | / | 0.464 | |
| 3fhx | PXL | Pyridoxal kinase | 2.7.1.35 | 0.464 | |
| 3l3r | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.464 | |
| 3nun | JMZ | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.464 | |
| 3zcx | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.464 | |
| 4bl1 | ANP | Maternal embryonic leucine zipper kinase | 2.7.11.1 | 0.464 | |
| 4cav | MYA | Glycylpeptide N-tetradecanoyltransferase | 2.3.1.97 | 0.464 | |
| 4jlm | 1NN | Deoxycytidine kinase | 2.7.1.74 | 0.464 | |
| 4k8a | K8A | Focal adhesion kinase 1 | 2.7.10.2 | 0.464 | |
| 1i44 | ACP | Insulin receptor | 2.7.10.1 | 0.463 | |
| 1ne6 | SP1 | cAMP-dependent protein kinase type I-alpha regulatory subunit | / | 0.463 | |
| 1u1c | BAU | Uridine phosphorylase | 2.4.2.3 | 0.463 | |
| 1xxj | UNC | Uricase | 1.7.3.3 | 0.463 | |
| 3fhx | PLP | Pyridoxal kinase | 2.7.1.35 | 0.463 | |
| 1xbt | TTP | Thymidine kinase, cytosolic | 2.7.1.21 | 0.462 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.462 | |
| 2b9j | ADP | Mitogen-activated protein kinase FUS3 | 2.7.11.24 | 0.462 | |
| 3eps | ATP | Isocitrate dehydrogenase kinase/phosphatase | / | 0.462 | |
| 4feu | 537 | Aminoglycoside 3'-phosphotransferase AphA1-IAB | / | 0.462 | |
| 4fox | UMP | Thymidylate synthase ThyA | / | 0.462 | |
| 4xe6 | 06U | Dihydrofolate reductase | 1.5.1.3 | 0.462 | |
| 5iqh | GNP | Bifunctional AAC/APH | 2.3.1 | 0.462 | |
| 1vbi | NAD | Malate/L-lactate dehydrogenase family protein | / | 0.461 | |
| 1w29 | TS0 | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.461 | |
| 2vbp | VB1 | Isopenicillin N synthase | 1.21.3.1 | 0.461 | |
| 2vmy | FFO | Serine hydroxymethyltransferase | / | 0.461 | |
| 3cgy | RDC | Virulence sensor histidine kinase PhoQ | 2.7.13.3 | 0.461 | |
| 4hj4 | FMN | LOV protein | / | 0.461 | |
| 1j1c | ADP | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.460 | |
| 2owb | 626 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.460 | |
| 4bqy | FNT | Egl nine homolog 1 | / | 0.460 | |
| 4fvq | ATP | Tyrosine-protein kinase JAK2 | / | 0.460 | |
| 4jey | PLP | Acetylornithine/succinyldiaminopimelate aminotransferase | 2.6.1.11 | 0.460 | |
| 1f8g | NAD | NAD(P) transhydrogenase subunit alpha part 1 | 1.6.1.2 | 0.459 | |
| 1kyx | CRM | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.459 | |
| 2cjf | RP4 | 3-dehydroquinate dehydratase | 4.2.1.10 | 0.459 | |
| 2e1z | B4P | Propionate kinase | / | 0.459 | |
| 2wo7 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.459 | |
| 2y6f | M9F | Isopenicillin N synthase | 1.21.3.1 | 0.459 | |
| 2zb4 | 5OP | Prostaglandin reductase 2 | 1.3.1.48 | 0.459 | |
| 3af3 | GCP | Pantothenate kinase | 2.7.1.33 | 0.459 | |
| 3cqe | P91 | Wee1-like protein kinase | 2.7.10.2 | 0.459 | |
| 3nuy | JPZ | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.459 | |
| 3p8i | FMN | Pentaerythritol tetranitrate reductase | / | 0.459 | |
| 3qd3 | 3Q5 | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.459 | |
| 4bqw | QNM | Egl nine homolog 1 | / | 0.459 | |
| 4jva | 1OR | cAMP-dependent protein kinase type II-beta regulatory subunit | / | 0.459 | |
| 4o7u | THF | Thymidylate synthase | / | 0.459 | |
| 5fko | TDC | Tetracycline repressor protein class D | / | 0.459 | |
| 1a9z | UPG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.458 | |
| 1b39 | ATP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
| 1ork | ATC | Tetracycline repressor protein class D | / | 0.458 | |
| 2hq9 | FAD | Mll6688 protein | / | 0.458 | |
| 2pui | ADP | Methylthioribose kinase | 2.7.1.100 | 0.458 | |
| 3dnt | ATP | Serine/threonine-protein kinase toxin HipA | / | 0.458 | |
| 4u9z | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.458 | |
| 4z63 | ILE_THR_GLN_TYS_TYS | Phytosulfokine receptor 1 | 2.7.11.1 | 0.458 | |
| 2pzj | NAD | Putative nucleotide sugar epimerase/ dehydratase | / | 0.457 | |
| 2rku | R78 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.457 | |
| 3bx5 | 304 | Mitogen-activated protein kinase 14 | / | 0.457 | |
| 4rrv | ATP | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.457 | |
| 1dli | UDX | UDP-glucose 6-dehydrogenase | / | 0.456 | |
| 1i24 | UPG | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.456 | |
| 2ozo | ANP | Tyrosine-protein kinase ZAP-70 | 2.7.10.2 | 0.456 | |
| 3g1o | RF1 | HTH-type transcriptional regulator EthR | / | 0.456 | |
| 3p97 | SAM | Genome polyprotein | 2.1.1.56 | 0.456 | |
| 4a3u | FMN | NADH:flavin oxidoreductase/NADH oxidase | / | 0.456 | |
| 4bmp | FMN | Protein NrdI | / | 0.456 | |
| 4g31 | 0WH | Eukaryotic translation initiation factor 2-alpha kinase 3 | 2.7.11.1 | 0.456 | |
| 4twn | B96 | Ephrin type-A receptor 3 | 2.7.10.1 | 0.456 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.456 | |
| 1e94 | ANP | ATP-dependent protease ATPase subunit HslU | / | 0.455 | |
| 1h36 | R88 | Squalene--hopene cyclase | 4.2.1.129 | 0.455 | |
| 1i5a | ACP | Chemotaxis protein CheA | 2.7.13.3 | 0.455 | |
| 1k4g | AIQ | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.455 | |
| 1lhw | ESM | Sex hormone-binding globulin | / | 0.455 | |
| 1phk | ATP | Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform | 2.7.11.19 | 0.455 | |
| 2buf | ADP | Acetylglutamate kinase | / | 0.455 | |
| 3a7j | ADP | Serine/threonine-protein kinase 24 | 2.7.11.1 | 0.455 | |
| 3pxk | PXK | Focal adhesion kinase 1 | 2.7.10.2 | 0.455 | |
| 4at4 | T6E | BDNF/NT-3 growth factors receptor | 2.7.10.1 | 0.455 | |
| 4i6f | 1C7 | Serine/threonine-protein kinase PLK2 | 2.7.11.21 | 0.455 | |
| 1ozq | PRF | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.454 | |
| 1txt | CAA | HMG-CoA synthase | / | 0.454 | |
| 3irn | 1CY | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.454 | |
| 3ngu | ADP | Nucleoside diphosphate kinase | / | 0.454 | |
| 3nks | ACJ | Protoporphyrinogen oxidase | 1.3.3.4 | 0.454 | |
| 3rv3 | ADP | Biotin carboxylase | 6.3.4.14 | 0.454 | |
| 4cvb | PQQ | Alcohol dehydrogenase | / | 0.454 | |
| 4fxf | ATP | Pyruvate kinase PKM | 2.7.1.40 | 0.454 | |
| 4u9y | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.454 | |
| 4yx6 | FMN | Omega-3 polyunsaturated fatty acid synthase subunit PfaD | / | 0.454 | |
| 5e92 | ANP | TGF-beta receptor type-2 | 2.7.11.30 | 0.454 | |
| 5fm6 | ADP | RuvB-like helicase | / | 0.454 | |
| 1cdk | ANP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.453 | |
| 1fq1 | ATP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.453 | |
| 1ol5 | ADP | Aurora kinase A | 2.7.11.1 | 0.453 | |
| 1t4c | COA | Formyl-CoA:oxalate CoA-transferase | / | 0.453 | |
| 1uda | UFG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.453 | |
| 2bfm | TOP | Pteridine reductase 1 | 1.5.1.33 | 0.453 | |
| 2rhr | EMO | Putative ketoacyl reductase | 1.3.1 | 0.453 | |
| 2vqd | AP2 | Biotin carboxylase | 6.3.4.14 | 0.453 | |
| 3a78 | 3EV | Vitamin D3 receptor | / | 0.453 | |
| 3rl3 | 5GP | Metallophosphoesterase MPPED2 | 3.1 | 0.453 | |
| 3tpt | ADP | Serine/threonine-protein kinase toxin HipA | / | 0.453 | |
| 4bb2 | STR | Corticosteroid-binding globulin | / | 0.453 | |
| 4cnz | ADP | Nitrogen regulatory protein P-II 1 | / | 0.453 | |
| 1yp3 | ATP | Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic | 2.7.7.27 | 0.452 | |
| 2w6p | OA4 | Biotin carboxylase | 6.3.4.14 | 0.452 | |
| 2x7j | TPP | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase | / | 0.452 | |
| 2zza | FOL | Dihydrofolate reductase | / | 0.452 | |
| 3biz | 61E | Wee1-like protein kinase | 2.7.10.2 | 0.452 | |
| 3c4w | ATP | Rhodopsin kinase | / | 0.452 | |
| 3hgo | FMN | 12-oxophytodienoate reductase 3 | 1.3.1.42 | 0.452 | |
| 3p8j | FMN | Pentaerythritol tetranitrate reductase | / | 0.452 | |
| 3qge | 26F | Genome polyprotein | 2.7.7.48 | 0.452 | |
| 1l8q | ADP | Chromosomal replication initiator protein DnaA | / | 0.451 | |
| 2c94 | TSF | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.451 | |
| 2kce | D16 | Thymidylate synthase | / | 0.451 | |
| 2q3o | FMN | 12-oxophytodienoate reductase 3 | 1.3.1.42 | 0.451 | |
| 2v2z | ADP | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | / | 0.451 | |
| 2w3m | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 2zsi | GA4 | Gibberellin receptor GID1A | 3 | 0.451 | |
| 3ing | NDP | Homoserine dehydrogenase related protein | / | 0.451 | |
| 3k45 | 51P | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 3lla | ACP | Myosin heavy chain kinase A | 2.7.11.7 | 0.451 | |
| 4boy | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.451 | |
| 4gts | 7TP | Geranylgeranyl transferase type-2 subunit beta | 2.5.1.60 | 0.451 | |
| 4nfs | NAJ | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.451 | |
| 5cvc | PLP | Serine racemase | / | 0.451 | |
| 5dto | SAH | Genome polyprotein | / | 0.451 | |
| 5jjr | SAH | Genome polyprotein | / | 0.451 | |
| 1icq | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.450 | |
| 1mf0 | GDP | Adenylosuccinate synthetase isozyme 1 | / | 0.450 | |
| 1q97 | ATP | Serine/threonine-protein kinase SKY1 | 2.7.11.1 | 0.450 | |
| 2fb8 | 215 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.450 | |
| 2hog | 710 | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.450 | |
| 2z4s | ADP | Chromosomal replication initiator protein DnaA | / | 0.450 | |
| 2z7q | ACP | Ribosomal protein S6 kinase alpha-1 | 2.7.11.1 | 0.450 | |
| 3e8x | NAP | BH1520 protein | / | 0.450 | |
| 3t99 | ADP | Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 | / | 0.450 | |
| 3v0m | 5GW | Histo-blood group ABO system transferase | / | 0.450 | |
| 4aw0 | ATP | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.450 | |
| 4fr1 | 0V2 | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.450 | |
| 5ab7 | MLC | Nonspecific lipid-transfer protein, putative | / | 0.450 | |
| 1equ | EQI | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.449 | |
| 1fw0 | KAI | Glutamate receptor 2 | / | 0.449 | |
| 2qqf | A1R | NAD-dependent protein deacetylase HST2 | 3.5.1 | 0.449 | |
| 2xpv | MIY | Tetracycline repressor protein class D | / | 0.449 | |
| 2xpw | OTC | Tetracycline repressor protein class D | / | 0.449 | |
| 2yer | TQ1 | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.449 | |
| 2zse | ACP | Pantothenate kinase | 2.7.1.33 | 0.449 | |
| 3ia4 | MTX | Dihydrofolate reductase | / | 0.449 | |
| 3iw4 | LW4 | Protein kinase C alpha type | 2.7.11.13 | 0.449 | |
| 3sqz | COA | Putative hydroxymethylglutaryl-CoA synthase | / | 0.449 | |
| 4b68 | NAP | L-ornithine N(5)-monooxygenase | / | 0.449 | |
| 4fl1 | ANP | Tyrosine-protein kinase SYK | 2.7.10.2 | 0.449 | |
| 4g34 | 924 | Eukaryotic translation initiation factor 2-alpha kinase 3 | 2.7.11.1 | 0.449 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.449 | |
| 4hj6 | FMN | LOV protein | / | 0.449 | |
| 4qml | ANP | Serine/threonine-protein kinase 24 | 2.7.11.1 | 0.449 | |
| 4r38 | RBF | Blue-light-activated histidine kinase 2 | 2.7.13.3 | 0.449 | |
| 4z64 | ILE_THR_GLN_TYS_TYS | Phytosulfokine receptor 1 | 2.7.11.1 | 0.449 | |
| 1cm8 | ANP | Mitogen-activated protein kinase 12 | / | 0.448 | |
| 1crb | RTL | Retinol-binding protein 1 | / | 0.448 | |
| 1lp4 | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.448 | |
| 1t86 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.448 | |
| 2fzj | DH3 | Dihydrofolate reductase | 1.5.1.3 | 0.448 | |
| 2pdt | FAD | Vivid PAS protein VVD | / | 0.448 | |
| 3orm | AGS | Serine/threonine protein kinase | / | 0.448 | |
| 4f0f | ACP | Probable serine/threonine-protein kinase roco4 | 2.7.11.1 | 0.448 | |
| 4oau | ADP | 2-5A-dependent ribonuclease | 3.1.26 | 0.448 | |
| 4xyb | NDP | Formate dehydrogenase | / | 0.448 | |
| 5e9e | ANP | Myosin heavy chain kinase A | 2.7.11.7 | 0.448 | |
| 3qak | UKA | Adenosine receptor A2a | / | 0.448 | |
| 1bwk | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.447 | |
| 1e92 | HBI | Pteridine reductase 1 | 1.5.1.33 | 0.447 | |
| 1eji | THF | Serine hydroxymethyltransferase, cytosolic | / | 0.447 | |
| 1oc1 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.447 | |
| 1zzl | TZY | Mitogen-activated protein kinase 14 | / | 0.447 | |
| 2z1x | PRF | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.447 | |
| 2zjw | REF | Casein kinase II subunit alpha | 2.7.11.1 | 0.447 | |
| 3lmh | ADP | Myosin heavy chain kinase A | 2.7.11.7 | 0.447 | |
| 3o9p | MHI | Periplasmic murein peptide-binding protein | / | 0.447 | |
| 3pn1 | IVH | DNA ligase | / | 0.447 | |
| 4deg | 0JJ | Hepatocyte growth factor receptor | 2.7.10.1 | 0.447 | |
| 4f9a | ADP | Cell division cycle 7-related protein kinase | 2.7.11.1 | 0.447 | |
| 4s33 | ANP | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.447 | |
| 4tx9 | AMZ | Phosphoribosyl isomerase A | / | 0.447 | |
| 1csn | ATP | Casein kinase I homolog 1 | 2.7.11.1 | 0.446 | |
| 1lb9 | DNQ | Glutamate receptor 2 | / | 0.446 | |
| 1q8y | ADP | Serine/threonine-protein kinase SKY1 | 2.7.11.1 | 0.446 | |
| 1srf | MTB | Streptavidin | / | 0.446 | |
| 1tow | CRZ | Fatty acid-binding protein, adipocyte | / | 0.446 | |
| 1u54 | ACP | Activated CDC42 kinase 1 | / | 0.446 | |
| 1uae | UD1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | / | 0.446 | |
| 2i0v | 6C3 | Macrophage colony-stimulating factor 1 receptor | 2.7.10.1 | 0.446 | |
| 2phk | ATP | Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform | 2.7.11.19 | 0.446 | |
| 2uzh | CDP | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | / | 0.446 | |
| 2x1e | X1E | Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 40 kDa form | 2.3.1.164 | 0.446 | |
| 2yls | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.446 | |
| 3l05 | SN0 | N-acetylornithine carbamoyltransferase | 2.1.3.9 | 0.446 | |
| 3r8u | Z31 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.446 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.446 | |
| 1adf | TAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.445 | |
| 1opb | RET | Retinol-binding protein 2 | / | 0.445 | |
| 1p4a | PCP | Pur operon repressor | / | 0.445 | |
| 1rej | B1L | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.445 | |
| 1u1f | 183 | Uridine phosphorylase | 2.4.2.3 | 0.445 | |
| 2c29 | NAP | Dihydroflavonol 4-reductase | / | 0.445 | |
| 2g25 | TDK | Pyruvate dehydrogenase E1 component | 1.2.4.1 | 0.445 | |
| 2qo4 | CHD | Fatty acid-binding protein 10-A, liver basic | / | 0.445 | |
| 3cr0 | 809 | Wee1-like protein kinase | 2.7.10.2 | 0.445 | |
| 3p67 | FMN | Pentaerythritol tetranitrate reductase | / | 0.445 | |
| 3sa1 | 6DR | Dihydrofolate reductase | / | 0.445 | |
| 4b5n | FMN | NAD(P)H:flavin oxidoreductase Sye4 | / | 0.445 | |
| 4fex | 0TO | Aminoglycoside 3'-phosphotransferase AphA1-IAB | / | 0.445 | |
| 4gh1 | 0WX | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.445 | |
| 4qly | FMN | Enone reductase CLA-ER | / | 0.445 | |
| 4uxx | ACP | Diacylglycerol kinase | 2.7.1.107 | 0.445 | |
| 4y95 | 746 | Tyrosine-protein kinase | / | 0.445 | |
| 5bvw | 1N1 | Epithelial discoidin domain-containing receptor 1 | 2.7.10.1 | 0.445 | |
| 5hbs | RTL | Retinol-binding protein 1 | / | 0.445 | |
| 5iot | UMP | Flavin-dependent thymidylate synthase | 2.1.1.148 | 0.445 | |
| 1q45 | FMN | 12-oxophytodienoate reductase 3 | 1.3.1.42 | 0.444 | |
| 1s4d | SAH | Uroporphyrinogen-III C-methyltransferase | 2.1.1.107 | 0.444 | |
| 2a9z | 26A | Adenosine kinase | 2.7.1.20 | 0.444 | |
| 2bgi | FAD | NADPH:ferredoxin reductase | / | 0.444 | |
| 2iyp | A2P | 6-phosphogluconate dehydrogenase, decarboxylating | 1.1.1.44 | 0.444 | |
| 2qk8 | MTX | Dihydrofolate reductase | / | 0.444 | |
| 2rir | NAP | Dipicolinate synthase subunit A | / | 0.444 | |
| 3hrf | ATP | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.444 | |
| 3t5i | SER_SER_CMT_FAR | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta | / | 0.444 | |
| 4ct2 | ATP | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.444 | |
| 4hne | ADP | Phosphatidylinositol 4-kinase type 2-alpha | / | 0.444 | |
| 4rnx | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.444 | |
| 5dt3 | ATP | Aurora kinase A | 2.7.11.1 | 0.444 | |
| 5kf9 | COA | Predicted acetyltransferase | / | 0.444 | |
| 1dgb | NDP | Catalase | 1.11.1.6 | 0.443 | |
| 1eqb | FFO | Serine hydroxymethyltransferase | 2.1.2.1 | 0.443 | |
| 1h63 | FMN | Pentaerythritol tetranitrate reductase | / | 0.443 | |
| 1t13 | INI | 6,7-dimethyl-8-ribityllumazine synthase 2 | / | 0.443 | |
| 2c97 | JCL | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.443 | |
| 2tsr | UMP | Thymidylate synthase | 2.1.1.45 | 0.443 | |
| 2vf7 | ADP | UvrABC system protein A | / | 0.443 | |
| 2vi5 | Y19 | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.443 | |
| 2wmx | ZY6 | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.443 | |
| 2z9d | FMN | FMN-dependent NADH-azoreductase | / | 0.443 | |
| 3d74 | NBB | Pheromone-binding protein ASP1 | / | 0.443 | |
| 3hgs | FMN | 12-oxophytodienoate reductase 3 | 1.3.1.42 | 0.443 | |
| 3is2 | FAD | Vivid PAS protein VVD | / | 0.443 | |
| 3lq2 | TDP | Pyruvate dehydrogenase E1 component | 1.2.4.1 | 0.443 | |
| 3otw | COA | Phosphopantetheine adenylyltransferase | / | 0.443 | |
| 3qeo | LLT | Deoxycytidine kinase | 2.7.1.74 | 0.443 | |
| 3sh2 | 5DR | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 4aux | XTC | Tetracycline repressor protein class D | / | 0.443 | |
| 4dbv | NDP | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.443 | |
| 4eev | L1X | Hepatocyte growth factor receptor | 2.7.10.1 | 0.443 | |
| 4f3g | KAI | Glutamate receptor 3 | / | 0.443 | |
| 4knz | CB3 | Thymidylate synthase | / | 0.443 | |
| 4n3l | 2FN | Prothrombin | 3.4.21.5 | 0.443 | |
| 4o1p | ANP | Ribonuclease L | / | 0.443 | |
| 4u0o | MTA | Lipoyl synthase 2 | / | 0.443 | |
| 5ab6 | CAA | Nonspecific lipid-transfer protein, putative | / | 0.443 | |
| 1clq | GDP | DNA-directed DNA polymerase | / | 0.442 | |
| 1nqx | RLP | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.442 | |
| 2ea1 | GPG | Ribonuclease I | 3.1.27.6 | 0.442 | |
| 2eud | GCQ | Ribonucleoside-diphosphate reductase large chain 1 | 1.17.4.1 | 0.442 | |
| 2fto | TMP | Thymidylate synthase | / | 0.442 | |
| 2pl0 | STI | Tyrosine-protein kinase Lck | 2.7.10.2 | 0.442 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.442 | |
| 3h0b | B35 | Beta-secretase 1 | 3.4.23.46 | 0.442 | |
| 3jyp | NAD | Quinate/shikimate dehydrogenase (NAD(+)) | / | 0.442 | |
| 3sl2 | ATP | Sensor histidine kinase WalK | / | 0.442 | |
| 3wv8 | ATP | Hmd co-occurring protein HcgE | / | 0.442 | |
| 4gt8 | ADP | Sensor protein VraS | 2.7.13.3 | 0.442 | |
| 4ix5 | ANP | Uncharacterized protein | / | 0.442 | |
| 4jv8 | 1M1 | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta | / | 0.442 | |
| 4krc | AGS | Cyclin-dependent protein kinase PHO85 | 2.7.11.22 | 0.442 | |
| 4ram | PNM | Metallo-beta-lactamase type 2 | / | 0.442 | |
| 4y6n | UPG | Glucosyl-3-phosphoglycerate synthase | 2.4.1.266 | 0.442 | |
| 4zm3 | PLP | Aminotransferase | / | 0.442 | |
| 5je2 | SAH | Methyl transferase | / | 0.442 | |
| 1gq2 | NAP | NADP-dependent malic enzyme | 1.1.1.40 | 0.441 | |
| 1mqb | ANP | Ephrin type-A receptor 2 | 2.7.10.1 | 0.441 | |
| 1mru | AGS | Serine/threonine-protein kinase PknB | 2.7.11.1 | 0.441 | |
| 1nhh | ANP | DNA mismatch repair protein MutL | / | 0.441 | |
| 1o9b | NAI | Quinate/shikimate dehydrogenase | / | 0.441 | |
| 2hs8 | FMN | 12-oxophytodienoate reductase 3 | 1.3.1.42 | 0.441 | |
| 2ihv | TPP | N(2)-(2-carboxyethyl)arginine synthase | / | 0.441 | |
| 2pa7 | TYD | TDP-4-oxo-6-deoxy-alpha-D-glucose-3,4-oxoisomerase | 5.3.2.3 | 0.441 | |
| 2v1a | FMN | NPH1-1 | / | 0.441 | |
| 3bgx | MEF | Thymidylate synthase | / | 0.441 | |
| 3dog | NNN | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.441 | |
| 3fmm | XI2 | Mitogen-activated protein kinase 14 | / | 0.441 | |
| 3gcq | 1BU | Mitogen-activated protein kinase 14 | / | 0.441 | |
| 3gyu | DL7 | Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily | / | 0.441 | |
| 3t4h | MD5 | Alpha-ketoglutarate-dependent dioxygenase AlkB | 1.14.11.33 | 0.441 | |
| 3x2v | ATP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.441 | |
| 4dhy | S41 | Glucokinase | 2.7.1.2 | 0.441 | |
| 4gnc | ASO | Regucalcin | 3.1.1.17 | 0.441 | |
| 4mv4 | ACP | Biotin carboxylase | 6.3.4.14 | 0.441 | |
| 4qem | HC4 | Phospholipase A2 VRV-PL-VIIIa | / | 0.441 | |
| 3eml | ZMA | Adenosine receptor A2a | / | 0.441 | |
| 1mvs | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 1ohj | COP | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 1rd4 | L08 | Integrin alpha-L | / | 0.440 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.440 | |
| 2vdy | HCY | Corticosteroid-binding globulin | / | 0.440 | |
| 2vkv | TDC | Tetracycline repressor protein class D | / | 0.440 | |
| 3cd3 | STU | Tyrosine-protein kinase Fes/Fps | 2.7.10.2 | 0.440 | |
| 3dga | RJ1 | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.440 | |
| 3ed1 | GA3 | Gibberellin receptor GID1 | / | 0.440 | |
| 3hxe | BD8 | Geranylgeranyl transferase type-2 subunit beta | 2.5.1.60 | 0.440 | |
| 3i8a | N22 | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 4f4q | FAD | Decaprenylphosphoryl-beta-D-ribose oxidase | / | 0.440 | |
| 4l9q | 9TP | Serum albumin | / | 0.440 | |
| 4qx5 | CMP | cGMP-dependent protein kinase 1 | 2.7.11.12 | 0.440 | |
| 4wfr | 2AM | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.440 | |
| 5dt9 | NAD | Erythronate-4-phosphate dehydrogenase | / | 0.440 | |
| 5jtb | ZMA | Adenosine receptor A2a | / | 0.440 |