2.600 Å
X-ray
1998-06-18
| Name: | Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform |
|---|---|
| ID: | PHKG1_RABIT |
| AC: | P00518 |
| Organism: | Oryctolagus cuniculus |
| Reign: | Eukaryota |
| TaxID: | 9986 |
| EC Number: | 2.7.11.19 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 21.459 |
|---|---|
| Number of residues: | 37 |
| Including | |
| Standard Amino Acids: | 35 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MN MN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.934 | 577.125 |
| % Hydrophobic | % Polar |
|---|---|
| 56.14 | 43.86 |
| According to VolSite | |

| HET Code: | ATP |
|---|---|
| Formula: | C10H12N5O13P3 |
| Molecular weight: | 503.149 g/mol |
| DrugBank ID: | DB00171 |
| Buried Surface Area: | 60.26 % |
| Polar Surface area: | 319.88 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 17 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| 47.9635 | 10.0563 | 48.5997 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1B | OG | SER- 31 | 3.03 | 163.33 | H-Bond (Protein Donor) |
| C1' | CG1 | VAL- 33 | 4 | 0 | Hydrophobic |
| C5' | CG2 | VAL- 33 | 3.7 | 0 | Hydrophobic |
| O2B | NZ | LYS- 48 | 3.22 | 0 | Ionic (Protein Cationic) |
| O1A | NZ | LYS- 48 | 3.21 | 0 | Ionic (Protein Cationic) |
| O1A | NZ | LYS- 48 | 3.21 | 135.42 | H-Bond (Protein Donor) |
| N6 | O | ASP- 104 | 2.99 | 170.42 | H-Bond (Ligand Donor) |
| N1 | N | MET- 106 | 3.17 | 163.87 | H-Bond (Protein Donor) |
| C2' | CG | GLU- 110 | 3.86 | 0 | Hydrophobic |
| O2' | OE2 | GLU- 110 | 2.54 | 159.73 | H-Bond (Ligand Donor) |
| O2G | NZ | LYS- 151 | 3.22 | 148.78 | H-Bond (Protein Donor) |
| O2G | NZ | LYS- 151 | 3.22 | 0 | Ionic (Protein Cationic) |
| O3' | O | GLU- 153 | 3.03 | 155.43 | H-Bond (Ligand Donor) |
| C2' | CD2 | LEU- 156 | 4 | 0 | Hydrophobic |
| O3G | MN | MN- 382 | 2.26 | 0 | Metal Acceptor |
| O2B | MN | MN- 382 | 2.26 | 0 | Metal Acceptor |
| O2G | MN | MN- 383 | 2.02 | 0 | Metal Acceptor |
| O3B | MN | MN- 383 | 2.71 | 0 | Metal Acceptor |
| O2A | MN | MN- 383 | 2.13 | 0 | Metal Acceptor |