1.900 Å
X-ray
2009-12-08
| Name: | N-acetylornithine carbamoyltransferase |
|---|---|
| ID: | AOTC_XANCP |
| AC: | Q8P8J2 |
| Organism: | Xanthomonas campestris pv. campestris |
| Reign: | Bacteria |
| TaxID: | 190485 |
| EC Number: | 2.1.3.9 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 27.458 |
|---|---|
| Number of residues: | 25 |
| Including | |
| Standard Amino Acids: | 22 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.163 | 384.750 |
| % Hydrophobic | % Polar |
|---|---|
| 51.75 | 48.25 |
| According to VolSite | |

| HET Code: | AN0 |
|---|---|
| Formula: | C7H12NO3 |
| Molecular weight: | 158.175 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 54.24 % |
| Polar Surface area: | 69.23 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 3 |
| H-Bond Donors: | 1 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 4 |
| X | Y | Z |
|---|---|---|
| 110.048 | 42.4704 | 82.5459 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O | OE1 | GLU- 144 | 2.6 | 142.74 | H-Bond (Protein Donor) |
| C2 | CD1 | LEU- 184 | 3.67 | 0 | Hydrophobic |
| CG | CG2 | VAL- 188 | 4.24 | 0 | Hydrophobic |
| OXT | NZ | LYS- 252 | 2.7 | 159.73 | H-Bond (Protein Donor) |
| OXT | NZ | LYS- 252 | 2.7 | 0 | Ionic (Protein Cationic) |
| CD | SG | CYS- 294 | 3.84 | 0 | Hydrophobic |
| N1 | O | HOH- 341 | 3.16 | 173.25 | H-Bond (Ligand Donor) |