1.620 Å
X-ray
2013-07-19
Name: | Uncharacterized protein |
---|---|
ID: | Q8X831_ECO57 |
AC: | Q8X831 |
Organism: | Escherichia coli O157:H7 |
Reign: | Bacteria |
TaxID: | 83334 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 24.965 |
---|---|
Number of residues: | 32 |
Including | |
Standard Amino Acids: | 31 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | |
Metals: | MG |
Ligandability | Volume (Å3) |
---|---|
0.646 | 617.625 |
% Hydrophobic | % Polar |
---|---|
43.72 | 56.28 |
According to VolSite |
HET Code: | ANP |
---|---|
Formula: | C10H13N6O12P3 |
Molecular weight: | 502.164 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 62.41 % |
Polar Surface area: | 322.68 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 16 |
H-Bond Donors: | 4 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
-11.396 | 29.584 | -26.4127 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3G | N | GLY- 143 | 3.16 | 148.86 | H-Bond (Protein Donor) |
O3G | ND2 | ASN- 144 | 2.91 | 128.41 | H-Bond (Protein Donor) |
O1A | NZ | LYS- 159 | 2.97 | 172.82 | H-Bond (Protein Donor) |
N7 | NZ | LYS- 159 | 3.4 | 140.18 | H-Bond (Protein Donor) |
O1A | NZ | LYS- 159 | 2.97 | 0 | Ionic (Protein Cationic) |
N6 | O | ASP- 202 | 2.94 | 157.4 | H-Bond (Ligand Donor) |
N1 | N | ILE- 204 | 2.84 | 167.03 | H-Bond (Protein Donor) |
O3' | O | THR- 243 | 2.92 | 170.37 | H-Bond (Ligand Donor) |
C2' | CD2 | LEU- 246 | 4.45 | 0 | Hydrophobic |
C2' | CD1 | ILE- 257 | 3.58 | 0 | Hydrophobic |
O1B | MG | MG- 302 | 2 | 0 | Metal Acceptor |
O1A | MG | MG- 302 | 2.4 | 0 | Metal Acceptor |