2.400 Å
X-ray
2002-12-10
Name: | cAMP-dependent protein kinase type I-alpha regulatory subunit |
---|---|
ID: | KAP0_BOVIN |
AC: | P00514 |
Organism: | Bos taurus |
Reign: | Eukaryota |
TaxID: | 9913 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 72.491 |
---|---|
Number of residues: | 32 |
Including | |
Standard Amino Acids: | 31 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.331 | 330.750 |
% Hydrophobic | % Polar |
---|---|
73.47 | 26.53 |
According to VolSite |
HET Code: | RP1 |
---|---|
Formula: | C10H12N5O5PS |
Molecular weight: | 345.272 g/mol |
DrugBank ID: | DB01790 |
Buried Surface Area: | 76.43 % |
Polar Surface area: | 179.67 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 10 |
H-Bond Donors: | 3 |
Rings: | 4 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
75.3286 | 47.0547 | 93.4119 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C5' | CG1 | VAL- 281 | 4.4 | 0 | Hydrophobic |
C4' | CB | PHE- 322 | 4.24 | 0 | Hydrophobic |
C1' | CB | PHE- 322 | 3.89 | 0 | Hydrophobic |
O2' | N | GLY- 323 | 2.95 | 155.42 | H-Bond (Protein Donor) |
O2' | OE2 | GLU- 324 | 2.61 | 148.67 | H-Bond (Ligand Donor) |
C3' | CD1 | ILE- 325 | 4.06 | 0 | Hydrophobic |
C5' | CB | ARG- 333 | 4.47 | 0 | Hydrophobic |
O2P | N | ALA- 334 | 2.55 | 157.18 | H-Bond (Protein Donor) |
C5' | CB | ALA- 335 | 3.79 | 0 | Hydrophobic |
C5' | CG2 | VAL- 337 | 4.21 | 0 | Hydrophobic |
C2' | CZ | TYR- 371 | 4.03 | 0 | Hydrophobic |
N6 | O | ASN- 372 | 3.44 | 132.15 | H-Bond (Ligand Donor) |