1.800 Å
X-ray
2000-09-12
| Name: | Glutamate receptor 2 |
|---|---|
| ID: | GRIA2_RAT |
| AC: | P19491 |
| Organism: | Rattus norvegicus |
| Reign: | Eukaryota |
| TaxID: | 10116 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 10.699 |
|---|---|
| Number of residues: | 21 |
| Including | |
| Standard Amino Acids: | 21 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.422 | 718.875 |
| % Hydrophobic | % Polar |
|---|---|
| 41.31 | 58.69 |
| According to VolSite | |

| HET Code: | DNQ |
|---|---|
| Formula: | C8H2N4O6 |
| Molecular weight: | 250.125 g/mol |
| DrugBank ID: | DB03759 |
| Buried Surface Area: | 70.9 % |
| Polar Surface area: | 150.49 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 8 |
| H-Bond Donors: | 0 |
| Rings: | 2 |
| Aromatic rings: | 0 |
| Anionic atoms: | 2 |
| Cationic atoms: | 2 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 28.9009 | 5.64156 | 39.0357 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| N1 | O | PRO- 89 | 2.65 | 163.6 | H-Bond (Ligand Donor) |
| C5 | CB | PRO- 89 | 4.2 | 0 | Hydrophobic |
| O1 | N | THR- 91 | 3.02 | 161.57 | H-Bond (Protein Donor) |
| O1 | NH1 | ARG- 96 | 2.71 | 139.53 | H-Bond (Protein Donor) |
| O1 | NH2 | ARG- 96 | 3.34 | 121.81 | H-Bond (Protein Donor) |
| O2 | NH2 | ARG- 96 | 2.92 | 156.57 | H-Bond (Protein Donor) |