sc-PDB

List of CHEMBLId :

This value allows a number of roughly comparable measures of half-maximal response concentration/potency/affinity to be compared on a negative logarithmic scale (e.g., an IC50 measurement of 1nM would have a pChEMBL value of 9).

Uniprot Annotation

Name:	Phospholipase A2 VRV-PL-VIIIa
ID:	D0VX11_9SAUR
AC:	D0VX11
Organism:	Daboia russellii pulchella
Reign:	Eukaryota
TaxID:	97228
EC Number:	/

---

Chains:

Chain Name:	Percentage of Residues within binding site
A	100 %

---

Ligand binding site composition:

B-Factor:	32.258
Number of residues:	14
Including
Standard Amino Acids:	12
Non Standard Amino Acids:	1
Water Molecules:	1
Cofactors:
Metals:

---

Cavity properties

Ligandability	Volume (Å3)
1.007	330.750

% Hydrophobic	% Polar
64.29	35.71
According to VolSite

HET Code:	NIM
Formula:	C13H12N2O5S
Molecular weight:	308.310 g/mol
DrugBank ID:	DB04743
Buried Surface Area:	31.28 %
Polar Surface area:	109.6 Å2

Number of
H-Bond Acceptors:	5
H-Bond Donors:	1
Rings:	2
Aromatic rings:	2
Anionic atoms:	1
Cationic atoms:	1
Rule of Five Violation:	0
Rotatable Bonds:	5

---

Mass center Coordinates

X	Y	Z
33.4424	5.20414	-9.17614

• 2D View
• 3D View