sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 1.872 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 1.648 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 1.003 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.990 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.987 | |
| 2rgh | FAD | Alpha-Glycerophosphate Oxidase | / | 0.982 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.971 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.958 | |
| 2rgo | FAD | Alpha-Glycerophosphate Oxidase | / | 0.954 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.937 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.917 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.908 | |
| 5i39 | FAD | L-amino acid deaminase | / | 0.883 | |
| 4ysh | FAD | Glycine oxidase | / | 0.863 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.859 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.854 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.851 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.834 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.824 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.822 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.822 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.815 | |
| 3if9 | FAD | Glycine oxidase | 1.4.3.19 | 0.813 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.813 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.811 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.810 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.809 | |
| 4k5r | FAD | Oxygenase | / | 0.800 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.797 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.791 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.790 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.788 | |
| 4fk1 | FAD | Putative thioredoxin reductase | / | 0.777 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.774 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.772 | |
| 4h2n | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.768 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.763 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.762 | |
| 2bac | FAD | Putative aminooxidase | / | 0.758 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.758 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.757 | |
| 3all | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.756 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.755 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.754 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.754 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.753 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.750 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.749 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.748 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.748 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.747 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.746 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.745 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.745 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.744 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.743 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.742 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.742 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.742 | |
| 3alj | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.742 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.741 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.741 | |
| 1ve9 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.741 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.741 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.741 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.740 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.740 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.740 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.738 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.736 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.735 | |
| 4nev | FAD | Trypanothione reductase | / | 0.735 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.734 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.734 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.733 | |
| 2i51 | FMN | Pyridoxamine 5'-phosphate oxidase-related, FMN-binding | / | 0.732 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.731 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.731 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 0.731 | |
| 3d72 | FAD | Vivid PAS protein VVD | / | 0.731 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.731 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.730 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.729 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.728 | |
| 1zy8 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.728 | |
| 2bab | FAD | Putative aminooxidase | / | 0.728 | |
| 2pr5 | FMN | Blue-light photoreceptor | / | 0.726 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.726 | |
| 4a6n | FAD | TetX family tetracycline inactivation enzyme | / | 0.725 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.725 | |
| 1bzl | FAD | Trypanothione reductase | 1.8.1.12 | 0.724 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.724 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.724 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.722 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.722 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.722 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.722 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.721 | |
| 4yxd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.721 | |
| 4eep | FMN | Phototropin-2 | 2.7.11.1 | 0.720 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.719 | |
| 4hj3 | FMN | LOV protein | / | 0.719 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.718 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.718 | |
| 2bra | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.718 | |
| 4jy2 | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.717 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.716 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.716 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.716 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.716 | |
| 1knp | FAD | L-aspartate oxidase | 1.4.3.16 | 0.715 | |
| 1tyt | FAD | Trypanothione reductase | 1.8.1.12 | 0.713 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.713 | |
| 3t50 | FMN | Blue-light-activated histidine kinase | 2.7.13.3 | 0.712 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.712 | |
| 1fnb | FAD | Ferredoxin--NADP reductase, chloroplastic | 1.18.1.2 | 0.711 | |
| 1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.711 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.711 | |
| 3da1 | FAD | Glycerol-3-phosphate dehydrogenase | / | 0.711 | |
| 4ntc | FAD | Thioredoxin reductase gliT | / | 0.711 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.711 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.709 | |
| 1e63 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.708 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.708 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.708 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.708 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.708 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.708 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.707 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.707 | |
| 2wow | FAD | Trypanothione reductase | / | 0.706 | |
| 2e48 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.705 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.705 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.704 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.704 | |
| 4hia | FMN | LOV protein | / | 0.704 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.703 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.701 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.701 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.701 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.700 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.700 | |
| 3qj4 | FAD | Renalase | / | 0.700 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.699 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.699 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.699 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.699 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.698 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.698 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.697 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.697 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.697 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.696 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.696 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.695 | |
| 2pdt | FAD | Vivid PAS protein VVD | / | 0.695 | |
| 3alm | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.695 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.695 | |
| 1krh | FAD | Benzoate 1,2-dioxygenase electron transfer component | 1.18.1.3 | 0.694 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.694 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.694 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.694 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.693 | |
| 2bry | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.693 | |
| 3znp | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.693 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.693 | |
| 1fnc | FDA | Ferredoxin--NADP reductase, chloroplastic | 1.18.1.2 | 0.692 | |
| 4nte | FAD | DepH | / | 0.692 | |
| 2xyo | FAD | TetX family tetracycline inactivation enzyme | / | 0.691 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.691 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.691 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.691 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.691 | |
| 4txi | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.691 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.689 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.689 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.688 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.688 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.688 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.688 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.687 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.687 | |
| 4tm1 | FDA | KtzI | / | 0.687 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.687 | |
| 1ty9 | FMN | Phenazine biosynthesis protein PhzG | 1.4 | 0.686 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.686 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.686 | |
| 1knr | FAD | L-aspartate oxidase | 1.4.3.16 | 0.685 | |
| 2wp5 | FAD | Trypanothione reductase | / | 0.685 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.685 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.685 | |
| 4hj4 | FMN | LOV protein | / | 0.685 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.684 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.684 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.684 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.683 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.683 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.682 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.682 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.682 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.681 | |
| 2pd8 | FAD | Vivid PAS protein VVD | / | 0.681 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.681 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.681 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.680 | |
| 2v1a | FMN | NPH1-1 | / | 0.680 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.680 | |
| 4eet | FMN | Phototropin-2 | 2.7.11.1 | 0.680 | |
| 4hj6 | FMN | LOV protein | / | 0.680 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.679 | |
| 1gvh | FAD | Flavohemoprotein | / | 0.678 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.678 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.678 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.678 | |
| 2hfo | FMN | Activator of photopigment and puc expression | / | 0.678 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.678 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.677 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.677 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.677 | |
| 3mzi | FMN | Activator of photopigment and puc expression | / | 0.676 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.675 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.675 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.675 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.675 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.675 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.675 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.675 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.674 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.674 | |
| 3sfe | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.674 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.674 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.674 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.674 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.674 | |
| 1pkv | RBF | Riboflavin synthase | 2.5.1.9 | 0.673 | |
| 3reo | SAH | (Iso)eugenol O-methyltransferase | 2.1.1.146 | 0.673 | |
| 5j3w | FMN | Sensory box protein | / | 0.673 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.672 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.672 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.672 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.671 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.671 | |
| 2g37 | FAD | Proline dehydrogenase | / | 0.671 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.670 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.670 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.670 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.670 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.670 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.670 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.670 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.669 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.669 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.669 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.669 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.669 | |
| 4r3a | RBF | Blue-light-activated histidine kinase 2 | 2.7.13.3 | 0.669 | |
| 4rhe | FMN | Flavin prenyltransferase UbiX | / | 0.669 | |
| 2gmj | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.668 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.668 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.668 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.667 | |
| 3ojw | FAD | NADPH--cytochrome P450 reductase | / | 0.667 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.667 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.667 | |
| 4h2p | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.667 | |
| 5dxa | SFG | Histone-arginine methyltransferase CARM1 | / | 0.667 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.666 | |
| 3a6q | FMN | FMN-binding protein | / | 0.666 | |
| 3ae4 | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.666 | |
| 3c96 | FAD | Flavin-containing monooxygenase | / | 0.666 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.665 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.665 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.665 | |
| 4usr | FAD | Monooxygenase | / | 0.665 | |
| 5c3j | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.665 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.664 | |
| 1p1h | NAD | Inositol-3-phosphate synthase | 5.5.1.4 | 0.664 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.664 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.664 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.663 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.663 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.663 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.662 | |
| 3sfd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.662 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.662 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.661 | |
| 1g28 | FMN | PHY3 | / | 0.661 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.661 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.661 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.660 | |
| 3fbs | FAD | Oxidoreductase | / | 0.660 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.660 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.659 | |
| 1wv4 | FMN | Pyridoxine/pyridoxamine 5'-phosphate oxidase | / | 0.659 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.659 | |
| 2pnu | ENM | Androgen receptor | / | 0.659 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.659 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.659 | |
| 3vo2 | FAD | Ferredoxin--NADP reductase | / | 0.659 | |
| 4hhd | FMN | Phototropin-1 | 2.7.11.1 | 0.659 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.659 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.658 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.658 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.658 | |
| 3ust | FAD | AcMNPV orf92 | / | 0.658 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.658 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.657 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.657 | |
| 2aqj | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.657 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.657 | |
| 4hms | FMN | Phenazine biosynthesis protein PhzG | 1.4 | 0.657 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.657 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.656 | |
| 1vhn | FMN | tRNA-dihydrouridine synthase | / | 0.656 | |
| 1x0p | FAD | Tll0078 protein | / | 0.656 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.656 | |
| 2iyi | FMN | AppA, antirepressor of ppsR, sensor of blue light | / | 0.656 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.656 | |
| 3bwc | SAM | Spermidine synthase, putative | / | 0.656 | |
| 3of4 | FMN | Nitroreductase | / | 0.656 | |
| 3qfb | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.656 | |
| 3sgl | SAM | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.656 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.656 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.656 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.655 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.655 | |
| 1ffu | FAD | Carbon monoxide dehydrogenase medium chain | / | 0.655 | |
| 1rq1 | FAD | Endoplasmic oxidoreductin-1 | 1.8.4 | 0.655 | |
| 1udy | FAD | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.7 | 0.655 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.655 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.655 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.655 | |
| 4wqm | FAD | Toluene-4-monooxygenase electron transfer component | 1.18.1.3 | 0.655 | |
| 5j4e | FMN | Sensory box protein | / | 0.655 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.654 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.654 | |
| 2byc | FMN | Blue-light receptor of the BLUF-family | / | 0.654 | |
| 2dki | FAD | 3-hydroxybenzoate 4-monooxygenase | 1.14.13.23 | 0.654 | |
| 4tlx | FDA | KtzI | / | 0.654 | |
| 1d2h | SAH | Glycine N-methyltransferase | 2.1.1.20 | 0.653 | |
| 3e4v | FMN | Uncharacterized protein | / | 0.653 | |
| 4ytn | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.653 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.652 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.652 | |
| 3jqr | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.652 | |
| 5dju | FMN | NPH1-2 | / | 0.652 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.651 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.651 | |
| 4jn9 | FAD | DepH | / | 0.651 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.650 | |
| 3a6r | FMN | FMN-binding protein | / | 0.650 | |
| 3kkj | FAD | Renalase | / | 0.650 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.650 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.650 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.650 |