sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 1.351 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 1.350 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 1.349 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 1.349 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 1.345 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 1.332 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 1.330 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 1.328 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 1.325 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 1.325 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 1.324 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 1.324 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 1.322 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 1.312 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 1.295 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 1.292 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 1.290 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 1.289 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 1.272 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 1.253 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 1.245 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 1.223 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.958 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.942 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.919 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.917 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.902 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.864 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.861 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.860 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.839 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.837 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.821 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.809 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.795 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.794 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.794 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.792 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.791 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.790 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.790 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.790 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.786 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.786 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.786 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.785 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.782 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.782 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.782 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.781 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.780 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.777 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.776 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.772 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.770 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.769 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.768 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.768 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.768 | |
| 2gqf | FAD | Uncharacterized protein HI_0933 | / | 0.766 | |
| 1bzl | FAD | Trypanothione reductase | 1.8.1.12 | 0.765 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.765 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.765 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.764 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.763 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.763 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.759 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.757 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.757 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.756 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.755 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.754 | |
| 4gr1 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.754 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.753 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.752 | |
| 3sqp | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.752 | |
| 3v76 | FDA | Uncharacterized protein | / | 0.752 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.751 | |
| 1tyt | FAD | Trypanothione reductase | 1.8.1.12 | 0.751 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.751 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.750 | |
| 3kkj | FAD | Renalase | / | 0.749 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.747 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.747 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.746 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.745 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.745 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.744 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.741 | |
| 2gv8 | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.741 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.740 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.738 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.738 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.738 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.738 | |
| 5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.738 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.737 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.736 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.735 | |
| 4nev | FAD | Trypanothione reductase | / | 0.735 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.734 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.733 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.732 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.731 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.731 | |
| 2cul | FAD | GidA-related protein | / | 0.730 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.730 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.730 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.730 | |
| 3fpz | AHZ | Thiamine thiazole synthase | / | 0.729 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.729 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.729 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.729 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.728 | |
| 3lxd | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.727 | |
| 3rha | FDA | Putrescine oxidase | / | 0.727 | |
| 3uoz | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.727 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.725 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.725 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.724 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.724 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.724 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.723 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.723 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.722 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.722 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.722 | |
| 4tm3 | FAD | KtzI | / | 0.722 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.722 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.721 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.721 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.721 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.719 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.718 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.716 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.716 | |
| 3dgz | FAD | Thioredoxin reductase 2, mitochondrial | 1.8.1.9 | 0.715 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.714 | |
| 4b63 | FAD | L-ornithine N(5)-monooxygenase | / | 0.714 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.714 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.713 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.712 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.712 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.711 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.711 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.711 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.710 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.710 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.710 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.710 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.709 | |
| 1h6v | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.709 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.709 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.708 | |
| 3qfb | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.708 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.708 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.708 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.708 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.707 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.707 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.706 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.706 | |
| 4dna | FAD | Probable glutathione reductase | / | 0.706 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.706 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.706 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.705 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.705 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.705 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.704 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.704 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.703 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.703 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.702 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.701 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.701 | |
| 4tlx | FDA | KtzI | / | 0.701 | |
| 4tm4 | FDA | KtzI | / | 0.701 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.700 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.700 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.699 | |
| 3t14 | FAD | Sulfide-quinone reductase | / | 0.699 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.698 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.698 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.698 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.697 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.697 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.697 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.696 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.696 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.696 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.696 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.696 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.696 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.696 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.695 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.695 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.695 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.695 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.695 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.695 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.695 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.694 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.694 | |
| 2j3n | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.694 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.694 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.693 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.692 | |
| 3qj4 | FAD | Renalase | / | 0.692 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.691 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.691 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.691 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.690 | |
| 1lvl | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.690 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.690 | |
| 2zth | SAM | Catechol O-methyltransferase | 2.1.1.6 | 0.690 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.690 | |
| 4nte | FAD | DepH | / | 0.690 | |
| 4tlz | FAD | KtzI | / | 0.690 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.690 | |
| 3fbs | FAD | Oxidoreductase | / | 0.689 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.689 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.688 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.688 | |
| 2bi7 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.688 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.688 | |
| 3e4v | FMN | Uncharacterized protein | / | 0.688 | |
| 4tm0 | FAD | KtzI | / | 0.688 | |
| 1vdc | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.687 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.687 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.687 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.686 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.686 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.686 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.686 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.685 | |
| 4eep | FMN | Phototropin-2 | 2.7.11.1 | 0.685 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.684 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.684 | |
| 2eq7 | NAD | Dihydrolipoyl dehydrogenase | / | 0.683 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.683 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.683 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.683 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.683 | |
| 4b66 | FAD | L-ornithine N(5)-monooxygenase | / | 0.683 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.682 | |
| 1r2j | FAD | FkbI | / | 0.682 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.682 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.682 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.682 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.681 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.681 | |
| 2wow | FAD | Trypanothione reductase | / | 0.681 | |
| 4b65 | FAD | L-ornithine N(5)-monooxygenase | / | 0.681 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.680 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.680 | |
| 3ue6 | FMN | Aureochrome1 | / | 0.680 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.680 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.680 | |
| 4k5r | FAD | Oxygenase | / | 0.680 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.679 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.679 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.679 | |
| 3fpf | MTA | Uncharacterized protein | / | 0.679 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.679 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.679 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.679 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.678 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 0.678 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.678 | |
| 4tm1 | FDA | KtzI | / | 0.678 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.677 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.677 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.677 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.677 | |
| 3ada | NAD | Subunit alpha of sarocosine oxidase | / | 0.677 | |
| 3eo8 | FMN | Putative nitroreductase | / | 0.677 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.677 | |
| 3t2k | FAD | Sulfide-quinone reductase | / | 0.677 | |
| 1lpf | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.676 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.676 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.676 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.676 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.676 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.676 | |
| 5br7 | FAD | UDP-galactopyranose mutase | / | 0.676 | |
| 3jsk | AHZ | Thiamine thiazole synthase | / | 0.675 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.675 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.675 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.674 | |
| 2fon | FAD | Acyl-coenzyme A oxidase | / | 0.674 | |
| 2isl | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.674 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.674 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.673 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.673 | |
| 3grv | ADN | Probable ribosomal RNA small subunit methyltransferase A | / | 0.672 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.672 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.672 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.672 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.671 | |
| 3c4a | FAD | Protodeoxyviolaceinate monooxygenase | 1 | 0.671 | |
| 2dki | FAD | 3-hydroxybenzoate 4-monooxygenase | 1.14.13.23 | 0.670 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.670 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.670 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.670 | |
| 2z6d | FMN | Phototropin-2 | 2.7.11.1 | 0.670 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.670 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.670 | |
| 4ccr | FAD | Thioredoxin reductase | / | 0.670 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.669 | |
| 2ym1 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.669 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.669 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.668 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.668 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.668 | |
| 4jn9 | FAD | DepH | / | 0.668 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.668 | |
| 4wuj | FMN | Glycoside hydrolase family 15, cellulose signaling associated protein envoy | / | 0.668 | |
| 2o06 | MTA | Spermidine synthase | 2.5.1.16 | 0.667 | |
| 3a26 | MTA | tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase | / | 0.667 | |
| 3all | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.667 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.667 | |
| 1ep3 | FAD | Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit | / | 0.666 | |
| 2bab | FAD | Putative aminooxidase | / | 0.666 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.666 | |
| 3alj | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.666 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.666 | |
| 4hia | FMN | LOV protein | / | 0.666 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.665 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.665 | |
| 4c04 | SFG | Protein arginine N-methyltransferase 6 | / | 0.665 | |
| 4yv2 | S4M | Spermidine synthase, putative | / | 0.665 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.665 | |
| 1d2h | SAH | Glycine N-methyltransferase | 2.1.1.20 | 0.664 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.664 | |
| 4iv0 | SAM | Phosphoethanolamine N-methyltransferase, putative | / | 0.664 | |
| 3alm | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.663 | |
| 3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.663 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.663 | |
| 4xcx | SAH | Small RNA 2'-O-methyltransferase | / | 0.663 | |
| 4yuz | S4M | Spermidine synthase, putative | / | 0.663 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.662 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.662 | |
| 2c31 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.661 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.661 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.660 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.660 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.660 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.660 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.660 | |
| 7mht | SAH | Modification methylase HhaI | 2.1.1.37 | 0.660 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.659 | |
| 2q28 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.659 | |
| 2ylw | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.659 | |
| 4hj4 | FMN | LOV protein | / | 0.659 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.659 | |
| 2ji6 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.658 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.658 | |
| 3gwd | FAD | Cyclohexanone monooxygenase | / | 0.658 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.658 | |
| 4fp9 | SAM | 5-methylcytosine rRNA methyltransferase NSUN4 | 2.1.1 | 0.658 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.658 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.657 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.657 | |
| 1z3c | SA8 | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.656 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.656 | |
| 3hji | FAD | Vivid PAS protein VVD | / | 0.656 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.656 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.656 | |
| 4jy2 | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.656 | |
| 4r38 | RBF | Blue-light-activated histidine kinase 2 | 2.7.13.3 | 0.656 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.656 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.655 | |
| 2pr5 | FMN | Blue-light photoreceptor | / | 0.655 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.655 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.654 | |
| 2hv9 | SFG | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.654 | |
| 3g8a | SAH | Ribosomal RNA small subunit methyltransferase G | / | 0.654 | |
| 3go4 | SAH | Uncharacterized protein | / | 0.654 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.654 | |
| 5bxy | SAH | Putative RNA methylase family UPF0020 | / | 0.654 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.653 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.653 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.653 | |
| 3qe2 | FAD | NADPH--cytochrome P450 reductase | / | 0.653 | |
| 3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.653 | |
| 2hfo | FMN | Activator of photopigment and puc expression | / | 0.652 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.652 | |
| 3hjk | FAD | Vivid PAS protein VVD | / | 0.652 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.652 | |
| 3qfc | FAD | NADPH--cytochrome P450 reductase | / | 0.652 | |
| 3syi | FAD | Sulfide-quinone reductase | / | 0.652 | |
| 4rpj | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.652 | |
| 5e8j | SAH | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.652 | |
| 2bac | FAD | Putative aminooxidase | / | 0.651 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.651 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.651 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.651 | |
| 4hhd | FMN | Phototropin-1 | 2.7.11.1 | 0.651 | |
| 4x4j | FAD | Putative oxygenase | / | 0.651 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.650 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.650 | |
| 9mht | SAH | Modification methylase HhaI | 2.1.1.37 | 0.650 |