1.660 Å
X-ray
2009-01-05
Name: | Uncharacterized protein |
---|---|
ID: | O26771_METTH |
AC: | O26771 |
Organism: | Methanothermobacter thermautotrophicus |
Reign: | Archaea |
TaxID: | 187420 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 14.364 |
---|---|
Number of residues: | 24 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.118 | 462.375 |
% Hydrophobic | % Polar |
---|---|
58.39 | 41.61 |
According to VolSite |
HET Code: | MTA |
---|---|
Formula: | C11H15N5O3S |
Molecular weight: | 297.333 g/mol |
DrugBank ID: | DB02282 |
Buried Surface Area: | 72.48 % |
Polar Surface area: | 144.61 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
-31.4274 | -7.9807 | -10.9237 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CS | CE | MET- 78 | 3.53 | 0 | Hydrophobic |
C3' | CE | MET- 78 | 4.26 | 0 | Hydrophobic |
O2' | OE2 | GLU- 153 | 2.59 | 161.26 | H-Bond (Ligand Donor) |
O3' | OE1 | GLU- 153 | 2.71 | 168.94 | H-Bond (Ligand Donor) |
O3' | OE2 | GLU- 153 | 3.28 | 131.95 | H-Bond (Ligand Donor) |
C1' | CG2 | ILE- 154 | 4.38 | 0 | Hydrophobic |
N3 | N | ILE- 154 | 3.24 | 133.51 | H-Bond (Protein Donor) |
N6 | OE1 | GLU- 181 | 2.97 | 167.16 | H-Bond (Ligand Donor) |
C5' | CB | LEU- 197 | 3.74 | 0 | Hydrophobic |
S5' | CD2 | LEU- 197 | 4.27 | 0 | Hydrophobic |
N7 | N | GLU- 199 | 2.97 | 174.11 | H-Bond (Protein Donor) |
N6 | O | GLU- 199 | 2.97 | 159.56 | H-Bond (Ligand Donor) |
S5' | C2 | TNA- 300 | 3.74 | 0 | Hydrophobic |