sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 1.351 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 1.350 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 1.349 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 1.348 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 1.344 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 1.332 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 1.330 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 1.328 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 1.325 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 1.325 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 1.324 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 1.324 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 1.322 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 1.312 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 1.295 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 1.291 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 1.290 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 1.289 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 1.272 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 1.253 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 1.245 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 1.223 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.937 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.927 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.901 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.900 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.881 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.865 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.864 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.857 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.856 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.854 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.852 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.823 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.821 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.820 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.808 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.807 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.797 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.796 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.795 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.794 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.794 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.792 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.791 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.790 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.790 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.790 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.787 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.787 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.786 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.782 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.781 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.781 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.781 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.779 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.778 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.778 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.775 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.774 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.771 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.770 | |
| 1bzl | FAD | Trypanothione reductase | 1.8.1.12 | 0.769 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.769 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.768 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.768 | |
| 4gr1 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.767 | |
| 2gqf | FAD | Uncharacterized protein HI_0933 | / | 0.766 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.765 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.763 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.763 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.761 | |
| 4b63 | FAD | L-ornithine N(5)-monooxygenase | / | 0.760 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.760 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.759 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.758 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.758 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.757 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.756 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.756 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.754 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.754 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.752 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.751 | |
| 1tyt | FAD | Trypanothione reductase | 1.8.1.12 | 0.751 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.751 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.751 | |
| 3v76 | FDA | Uncharacterized protein | / | 0.751 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.749 | |
| 3kkj | FAD | Renalase | / | 0.749 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.749 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.748 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.747 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.747 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.744 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.743 | |
| 2gv8 | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.741 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.741 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.740 | |
| 4nev | FAD | Trypanothione reductase | / | 0.740 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.740 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.739 | |
| 5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.739 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.738 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.738 | |
| 3sqp | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.738 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.738 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.737 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.736 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.735 | |
| 3dgz | FAD | Thioredoxin reductase 2, mitochondrial | 1.8.1.9 | 0.735 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.733 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.732 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.731 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.730 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.730 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.730 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.730 | |
| 3fpz | AHZ | Thiamine thiazole synthase | / | 0.729 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.729 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.729 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.728 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.728 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.727 | |
| 3rha | FDA | Putrescine oxidase | / | 0.727 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.726 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.725 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.725 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.724 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.724 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.723 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.723 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.722 | |
| 4tm3 | FAD | KtzI | / | 0.722 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.721 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.721 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.720 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.718 | |
| 4tm4 | FDA | KtzI | / | 0.717 | |
| 2cul | FAD | GidA-related protein | / | 0.716 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.716 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.716 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.715 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.715 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.714 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.714 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.712 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.712 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.712 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.712 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.711 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.711 | |
| 3uoz | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.711 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.711 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.710 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.710 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.709 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.709 | |
| 1h6v | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.709 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.709 | |
| 4dna | FAD | Probable glutathione reductase | / | 0.709 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.708 | |
| 3qfb | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.708 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.708 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.708 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.707 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.707 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.707 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.706 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.706 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.705 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.704 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.704 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.703 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.703 | |
| 4nte | FAD | DepH | / | 0.703 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.701 | |
| 4tlx | FDA | KtzI | / | 0.701 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.700 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.700 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.699 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.698 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.698 | |
| 4b65 | FAD | L-ornithine N(5)-monooxygenase | / | 0.697 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.696 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.696 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.696 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.696 | |
| 2ym1 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.696 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.696 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.696 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.696 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.695 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.695 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.695 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.695 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.695 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.694 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.694 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.694 | |
| 2j3n | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.694 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.694 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.694 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.694 | |
| 2bi7 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.693 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.693 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.693 | |
| 1vdc | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.692 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.692 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.692 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.692 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.691 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.691 | |
| 3qj4 | FAD | Renalase | / | 0.691 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.690 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.690 | |
| 1lvl | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.690 | |
| 2zth | SAM | Catechol O-methyltransferase | 2.1.1.6 | 0.690 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.690 | |
| 4tlz | FAD | KtzI | / | 0.690 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.689 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.688 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.688 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.687 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.687 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.687 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.686 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.686 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.686 | |
| 4eep | FMN | Phototropin-2 | 2.7.11.1 | 0.685 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.684 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.684 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.684 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.683 | |
| 2eq7 | NAD | Dihydrolipoyl dehydrogenase | / | 0.683 | |
| 2ih2 | NEA | Modification methylase TaqI | 2.1.1.72 | 0.683 | |
| 4b66 | FAD | L-ornithine N(5)-monooxygenase | / | 0.683 | |
| 1f3p | FAD | Ferredoxin reductase | / | 0.682 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.682 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.682 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.681 | |
| 2wow | FAD | Trypanothione reductase | / | 0.681 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.681 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.681 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.681 | |
| 3ue6 | FMN | Aureochrome1 | / | 0.681 | |
| 4k5r | FAD | Oxygenase | / | 0.681 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.681 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.680 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.680 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.679 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.679 | |
| 3gwd | FAD | Cyclohexanone monooxygenase | / | 0.679 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.679 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.679 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.679 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.679 | |
| 4yxd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.679 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.678 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 0.678 | |
| 4tm1 | FDA | KtzI | / | 0.678 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.677 | |
| 3ada | NAD | Subunit alpha of sarocosine oxidase | / | 0.677 | |
| 3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.677 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.677 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.677 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.677 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.677 | |
| 1lpf | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.676 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.676 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.676 | |
| 3fbs | FAD | Oxidoreductase | / | 0.676 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.676 | |
| 3jsk | AHZ | Thiamine thiazole synthase | / | 0.675 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.675 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.674 | |
| 2isl | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.674 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.674 | |
| 5af7 | FAD | Acyl-CoA dehydrogenase | / | 0.674 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.673 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.673 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.673 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.673 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.673 | |
| 2ok8 | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.672 | |
| 3grv | ADN | Probable ribosomal RNA small subunit methyltransferase A | / | 0.672 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.672 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.672 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.672 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.672 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.671 | |
| 3c4a | FAD | Protodeoxyviolaceinate monooxygenase | 1 | 0.671 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.671 | |
| 5br7 | FAD | UDP-galactopyranose mutase | / | 0.671 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.670 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.670 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.669 | |
| 2z6d | FMN | Phototropin-2 | 2.7.11.1 | 0.669 | |
| 4q73 | FAD | Bifunctional protein PutA | / | 0.669 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.668 | |
| 1r2j | FAD | FkbI | / | 0.668 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.668 | |
| 4wuj | FMN | Glycoside hydrolase family 15, cellulose signaling associated protein envoy | / | 0.668 | |
| 3a26 | MTA | tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase | / | 0.667 | |
| 3all | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.667 | |
| 5ig2 | NAD | Short-chain dehydrogenase/reductase SDR | / | 0.667 | |
| 1ep3 | FAD | Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit | / | 0.666 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.666 | |
| 4jn9 | FAD | DepH | / | 0.666 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.666 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.665 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.665 | |
| 2bab | FAD | Putative aminooxidase | / | 0.665 | |
| 4yv2 | S4M | Spermidine synthase, putative | / | 0.665 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.664 | |
| 4c04 | SFG | Protein arginine N-methyltransferase 6 | / | 0.664 | |
| 4iv0 | SAM | Phosphoethanolamine N-methyltransferase, putative | / | 0.664 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.663 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.663 | |
| 4ccr | FAD | Thioredoxin reductase | / | 0.663 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.663 | |
| 4xcx | SAH | Small RNA 2'-O-methyltransferase | / | 0.663 | |
| 4yuz | S4M | Spermidine synthase, putative | / | 0.663 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.662 | |
| 3e4v | FMN | Uncharacterized protein | / | 0.662 | |
| 3epp | SFG | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.662 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.662 | |
| 2c31 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.661 | |
| 2hmv | ADP | Ktr system potassium uptake protein A | / | 0.661 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.661 | |
| 2q28 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.661 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.661 | |
| 1d2h | SAH | Glycine N-methyltransferase | 2.1.1.20 | 0.660 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.660 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.660 | |
| 4tm0 | FAD | KtzI | / | 0.660 | |
| 4y7c | FAD | NADPH--cytochrome P450 reductase | / | 0.660 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.660 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.660 | |
| 7mht | SAH | Modification methylase HhaI | 2.1.1.37 | 0.660 | |
| 1egd | FAD | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.7 | 0.659 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.659 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.659 | |
| 2ylw | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.659 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.659 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.659 | |
| 4hj4 | FMN | LOV protein | / | 0.659 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.659 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.658 | |
| 2ji6 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.658 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.658 | |
| 3duw | SAH | O-methyltransferase, putative | / | 0.658 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.658 | |
| 4fp9 | SAM | 5-methylcytosine rRNA methyltransferase NSUN4 | 2.1.1 | 0.658 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.657 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.657 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.656 | |
| 3hji | FAD | Vivid PAS protein VVD | / | 0.656 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.656 | |
| 3t2y | FAD | Sulfide-quinone reductase | / | 0.656 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.656 | |
| 4r38 | RBF | Blue-light-activated histidine kinase 2 | 2.7.13.3 | 0.656 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.655 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.655 | |
| 2pr5 | FMN | Blue-light photoreceptor | / | 0.655 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.655 | |
| 5bxy | SAH | Putative RNA methylase family UPF0020 | / | 0.655 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.655 | |
| 5i39 | FAD | L-amino acid deaminase | / | 0.655 | |
| 2hv9 | SFG | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.654 | |
| 3g8a | SAH | Ribosomal RNA small subunit methyltransferase G | / | 0.654 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.654 | |
| 4ylf | FAD | Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit homolog | / | 0.654 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.653 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.653 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.653 | |
| 3qe2 | FAD | NADPH--cytochrome P450 reductase | / | 0.653 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.653 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.652 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.652 | |
| 3qfc | FAD | NADPH--cytochrome P450 reductase | / | 0.652 | |
| 3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.652 | |
| 3syi | FAD | Sulfide-quinone reductase | / | 0.652 | |
| 4nmb | FAD | Bifunctional protein PutA | / | 0.652 | |
| 5e8j | SAH | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.652 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.651 | |
| 4hhd | FMN | Phototropin-1 | 2.7.11.1 | 0.651 | |
| 4x4j | FAD | Putative oxygenase | / | 0.651 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.650 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.650 | |
| 2bac | FAD | Putative aminooxidase | / | 0.650 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.650 | |
| 3up5 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.650 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.650 | |
| 9mht | SAH | Modification methylase HhaI | 2.1.1.37 | 0.650 |