sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4ech | FAD | Polyamine oxidase FMS1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 4ech | FAD | Polyamine oxidase FMS1 | / | 1.453 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 1.258 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 1.240 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 1.209 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 1.200 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 1.199 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 1.141 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 1.123 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 1.117 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 1.112 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 1.099 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 1.097 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 1.092 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 1.069 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 1.067 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 1.061 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 1.057 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 1.051 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 1.047 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 1.047 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 1.037 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 1.034 | |
| 2yg6 | FAD | Putrescine oxidase | / | 1.024 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 1.017 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 1.016 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 1.012 | |
| 2yg3 | FAD | Putrescine oxidase | / | 1.012 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.999 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.996 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 0.989 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.986 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.982 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.978 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.977 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.975 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.967 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.963 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.962 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.952 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.927 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.922 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.903 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.898 | |
| 3kkj | FAD | Renalase | / | 0.892 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.871 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.869 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.869 | |
| 3qj4 | FAD | Renalase | / | 0.866 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.864 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.857 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.849 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.849 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.843 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.841 | |
| 2bab | FAD | Putative aminooxidase | / | 0.836 | |
| 3rha | FDA | Putrescine oxidase | / | 0.834 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.833 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.812 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.810 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.809 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.808 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.808 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.805 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.802 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.801 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.801 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.797 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.793 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.791 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.791 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.790 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.789 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.787 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.786 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.785 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.784 | |
| 2bac | FAD | Putative aminooxidase | / | 0.784 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.782 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.780 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.779 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.779 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.779 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.774 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.774 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.771 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.771 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.770 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.770 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.764 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.763 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.762 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.760 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.760 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.759 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.758 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.756 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.756 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.751 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.751 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.750 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.746 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.743 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.742 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.742 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.740 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.739 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.738 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.737 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.736 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.736 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.736 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.735 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.734 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.733 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.732 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.732 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.731 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.730 | |
| 4h50 | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.730 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.730 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.729 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.729 | |
| 1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.727 | |
| 2gr1 | FAD | Ferredoxin reductase | / | 0.727 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.725 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.725 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.722 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.722 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.721 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.721 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.720 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.720 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.720 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.719 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.719 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.718 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.718 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.717 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.717 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.717 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.717 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.716 | |
| 3ukk | FDA | UDP-galactopyranose mutase | / | 0.715 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.715 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.713 | |
| 3uka | FAD | UDP-galactopyranose mutase | / | 0.713 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.713 | |
| 4ykf | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.713 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.712 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.711 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.710 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.710 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.710 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.709 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.708 | |
| 3g5s | FAD | Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO | / | 0.707 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.707 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.706 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.706 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.705 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.705 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.705 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.705 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.704 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.704 | |
| 5br7 | FAD | UDP-galactopyranose mutase | / | 0.703 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.703 | |
| 2cdu | FAD | NADH oxidase | / | 0.702 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.702 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.702 | |
| 4ysh | FAD | Glycine oxidase | / | 0.702 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.701 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.701 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.700 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.700 | |
| 3uox | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.700 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.700 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.699 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.699 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.697 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.696 | |
| 4nev | FAD | Trypanothione reductase | / | 0.696 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.694 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.693 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.692 | |
| 3dgz | FAD | Thioredoxin reductase 2, mitochondrial | 1.8.1.9 | 0.692 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.692 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.691 | |
| 2rgh | FAD | Alpha-Glycerophosphate Oxidase | / | 0.691 | |
| 1ffu | FAD | Carbon monoxide dehydrogenase medium chain | / | 0.690 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.690 | |
| 3v76 | FDA | Uncharacterized protein | / | 0.690 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.690 | |
| 4k5r | FAD | Oxygenase | / | 0.690 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.690 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.690 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.689 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.687 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.687 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.687 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.686 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.686 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.685 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.684 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.683 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.683 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.681 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.681 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.681 | |
| 3alm | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.680 | |
| 3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.680 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.678 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.677 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.677 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.676 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.676 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.676 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.676 | |
| 1knr | FAD | L-aspartate oxidase | 1.4.3.16 | 0.675 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.675 | |
| 3gmb | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.675 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.675 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.674 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.674 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.674 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.673 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.673 | |
| 3ada | NAD | Subunit alpha of sarocosine oxidase | / | 0.673 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.673 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.673 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.673 | |
| 1ek5 | NAD | UDP-glucose 4-epimerase | / | 0.672 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.672 | |
| 2isk | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.672 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.671 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.671 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.671 | |
| 4tlz | FAD | KtzI | / | 0.671 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.670 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.670 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.670 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.670 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.670 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.670 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.669 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.669 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.669 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.669 | |
| 1zy8 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.668 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.668 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.667 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.667 | |
| 3all | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.666 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.665 | |
| 3aeb | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.665 | |
| 4j31 | FAD | Kynurenine 3-monooxygenase | / | 0.665 | |
| 5hhf | FDA | UDP-galactopyranose mutase | / | 0.665 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.664 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.664 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.664 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.664 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.663 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.663 | |
| 4tm3 | FAD | KtzI | / | 0.663 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.662 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.662 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.662 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.662 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.661 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.661 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.661 | |
| 4ttc | FMN | Iodotyrosine deiodinase 1 | / | 0.661 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.661 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.660 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.660 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.660 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.660 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.660 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.660 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.659 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.659 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.659 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.659 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.659 | |
| 4h2n | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.658 | |
| 4j2w | FAD | Kynurenine 3-monooxygenase | / | 0.658 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.658 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.658 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.657 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.657 | |
| 2rgo | FAD | Alpha-Glycerophosphate Oxidase | / | 0.657 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.657 | |
| 4h2p | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.657 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.657 | |
| 1lpf | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.656 | |
| 2isl | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.656 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.656 | |
| 3ou6 | SAM | SAM-dependent methyltransferase | / | 0.656 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.656 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.656 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.655 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.655 | |
| 3alj | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.655 | |
| 3gd3 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.655 | |
| 2j3n | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.654 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.654 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.654 | |
| 5eow | FAD | 6-hydroxynicotinate 3-monooxygenase | 1.14.13.114 | 0.654 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.653 | |
| 1q1r | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.653 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.652 | |
| 2pd7 | FAD | Vivid PAS protein VVD | / | 0.652 | |
| 2v6o | FAD | Thioredoxin glutathione reductase | / | 0.652 | |
| 2wow | FAD | Trypanothione reductase | / | 0.652 | |
| 3sx2 | NAD | Uncharacterized protein | / | 0.652 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.651 | |
| 4h4z | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.651 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.651 | |
| 5j3w | FMN | Sensory box protein | / | 0.651 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.650 | |
| 2gqf | FAD | Uncharacterized protein HI_0933 | / | 0.650 | |
| 3ad9 | NAD | Subunit alpha of sarocosine oxidase | / | 0.650 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.650 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.650 | |
| 4eeu | FMN | Phototropin-2 | 2.7.11.1 | 0.650 |