sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 1.409 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 1.367 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 1.352 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 1.133 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 1.082 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.954 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.921 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.906 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.902 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.880 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.875 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.874 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.860 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.855 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 0.840 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.828 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.828 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.827 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.826 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.824 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.824 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.819 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.819 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.818 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.816 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.812 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.810 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.810 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.809 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.809 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.808 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.808 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.806 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.805 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.805 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.804 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.802 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.799 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.799 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.798 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.795 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.795 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.794 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.792 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.791 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.791 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.789 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 0.789 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.787 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.785 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.784 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.783 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.781 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.780 | |
| 3rha | FDA | Putrescine oxidase | / | 0.779 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.776 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.774 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.774 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.773 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.771 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.771 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.769 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.769 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.766 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.764 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.764 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.763 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.763 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.761 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.760 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.760 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.759 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.759 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.759 | |
| 3ad9 | NAD | Subunit alpha of sarocosine oxidase | / | 0.759 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.758 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.757 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.755 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.754 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.754 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.753 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.753 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.752 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.751 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.750 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.750 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.748 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.748 | |
| 3kkj | FAD | Renalase | / | 0.748 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.747 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.747 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.747 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.747 | |
| 1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.743 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.740 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.740 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.739 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.739 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.739 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.739 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.738 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.738 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.737 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.736 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.735 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.733 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.732 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.732 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.730 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.730 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.730 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.729 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.728 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.728 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.728 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.728 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.727 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.726 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.726 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.725 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.724 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.724 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.723 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.723 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.723 | |
| 2gqf | FAD | Uncharacterized protein HI_0933 | / | 0.723 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.723 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.722 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.722 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.721 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.721 | |
| 4em3 | FAD | Coenzyme A disulfide reductase | / | 0.720 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.719 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.718 | |
| 2ylw | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.718 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.718 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.717 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.717 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.717 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.717 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.717 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.716 | |
| 2cul | FAD | GidA-related protein | / | 0.716 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.716 | |
| 3dgz | FAD | Thioredoxin reductase 2, mitochondrial | 1.8.1.9 | 0.716 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.714 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.714 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.714 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.713 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.713 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.713 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.713 | |
| 4ykf | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.712 | |
| 3qj4 | FAD | Renalase | / | 0.711 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.710 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.710 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.710 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.710 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.709 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.709 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.709 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.709 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.707 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.707 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.706 | |
| 4b66 | FAD | L-ornithine N(5)-monooxygenase | / | 0.706 | |
| 2qa1 | FAD | PgaE | / | 0.705 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.705 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.705 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.704 | |
| 1tyt | FAD | Trypanothione reductase | 1.8.1.12 | 0.704 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.703 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.703 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.702 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.702 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.702 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.702 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.701 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.701 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.701 | |
| 3ada | NAD | Subunit alpha of sarocosine oxidase | / | 0.701 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.701 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.701 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.701 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.701 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.699 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.699 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.699 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.698 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.698 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.698 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.697 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.697 | |
| 4a65 | FAD | Thioredoxin reductase | / | 0.697 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.697 | |
| 3uox | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.695 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.695 | |
| 4nwz | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.695 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.694 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.694 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.693 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.693 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.693 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.693 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.693 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.692 | |
| 2ylx | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.692 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.692 | |
| 3fbs | FAD | Oxidoreductase | / | 0.692 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.692 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.692 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.691 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.691 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.690 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.690 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.690 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.690 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.689 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.689 | |
| 2yls | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.689 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.689 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.689 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.688 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.688 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.688 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.687 | |
| 4k5r | FAD | Oxygenase | / | 0.687 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.687 | |
| 1knr | FAD | L-aspartate oxidase | 1.4.3.16 | 0.686 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.686 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.685 | |
| 2ylt | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.685 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.685 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.684 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.684 | |
| 4nev | FAD | Trypanothione reductase | / | 0.684 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.683 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.683 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.683 | |
| 2bra | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.682 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.682 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.681 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.680 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.680 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.679 | |
| 3f8r | NAP | NADH oxidase/thioredoxin reductase | / | 0.679 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.679 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.679 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.678 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.678 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.678 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.678 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.678 | |
| 4ccr | FAD | Thioredoxin reductase | / | 0.678 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.678 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.678 | |
| 5i39 | FAD | L-amino acid deaminase | / | 0.678 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.677 | |
| 2eq7 | NAD | Dihydrolipoyl dehydrogenase | / | 0.676 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.676 | |
| 2wow | FAD | Trypanothione reductase | / | 0.676 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.676 | |
| 4x4j | FAD | Putative oxygenase | / | 0.676 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.675 | |
| 3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.675 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.675 | |
| 4jn9 | FAD | DepH | / | 0.675 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.674 | |
| 2xvh | FAD | Putative flavin-containing monooxygenase | / | 0.674 | |
| 3da1 | FAD | Glycerol-3-phosphate dehydrogenase | / | 0.674 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.674 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.674 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.674 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.673 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.673 | |
| 2zzc | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.673 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.673 | |
| 1la2 | NAD | Inositol-3-phosphate synthase | 5.5.1.4 | 0.672 | |
| 3g5q | FAD | Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO | / | 0.672 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.671 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.671 | |
| 1knp | FAD | L-aspartate oxidase | 1.4.3.16 | 0.670 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.670 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.670 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.670 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.670 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.669 | |
| 3gwd | FAD | Cyclohexanone monooxygenase | / | 0.669 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.669 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.669 | |
| 4tm4 | FDA | KtzI | / | 0.669 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.668 | |
| 2bac | FAD | Putative aminooxidase | / | 0.668 | |
| 2dki | FAD | 3-hydroxybenzoate 4-monooxygenase | 1.14.13.23 | 0.668 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.668 | |
| 4d04 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.668 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.668 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.667 | |
| 2oa1 | FAD | Flavin-dependent tryptophan halogenase RebH | 1.14.19.9 | 0.667 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.666 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.666 | |
| 2oal | FAD | Flavin-dependent tryptophan halogenase RebH | 1.14.19.9 | 0.666 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.666 | |
| 5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.665 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.664 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.664 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.664 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.664 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.664 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.663 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.663 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.663 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.662 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.662 | |
| 1h6v | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.661 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.660 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.660 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.660 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.660 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.660 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.660 | |
| 4xr9 | NAD | CalS8 | / | 0.660 | |
| 1vdc | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.659 | |
| 4gr1 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.659 | |
| 4tm1 | FDA | KtzI | / | 0.659 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.659 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.658 | |
| 5eow | FAD | 6-hydroxynicotinate 3-monooxygenase | 1.14.13.114 | 0.658 | |
| 1rq1 | FAD | Endoplasmic oxidoreductin-1 | 1.8.4 | 0.657 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.657 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.657 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.656 | |
| 4gdc | FAD | UDP-galactopyranose mutase | / | 0.656 | |
| 2bab | FAD | Putative aminooxidase | / | 0.655 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.655 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.655 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.655 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.655 | |
| 4nte | FAD | DepH | / | 0.655 | |
| 4usq | FAD | Pyridine nucleotide-disulfide oxidoreductase | / | 0.655 | |
| 2gmj | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.654 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.654 | |
| 2c31 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.653 | |
| 3awi | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 1.5 | 0.653 | |
| 2ok8 | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.652 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.652 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.652 | |
| 4gdd | FAD | UDP-galactopyranose mutase | / | 0.652 | |
| 1bzl | FAD | Trypanothione reductase | 1.8.1.12 | 0.651 | |
| 1onf | FAD | Glutathione reductase | 1.8.1.7 | 0.651 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.651 | |
| 4h4v | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.651 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.651 | |
| 5c3j | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.651 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.651 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.650 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.650 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.650 | |
| 4ees | FMN | Phototropin-2 | 2.7.11.1 | 0.650 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.650 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.650 |