Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1g2a | BB2 | Peptide deformylase | 3.5.1.88 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 1g2a | BB2 | Peptide deformylase | 3.5.1.88 | 1.000 | |
| 1lru | BB2 | Peptide deformylase | 3.5.1.88 | 0.676 | |
| 1g27 | BB1 | Peptide deformylase | 3.5.1.88 | 0.632 | |
| 3k6l | 2BB | Peptide deformylase | 3.5.1.88 | 0.605 | |
| 4wxl | BB2 | Peptide deformylase | / | 0.576 | |
| 4e9a | QAP | Peptide deformylase | / | 0.549 | |
| 2ew5 | Y12 | Peptide deformylase | / | 0.540 | |
| 3m6p | BB2 | Peptide deformylase 1B, chloroplastic/mitochondrial | 3.5.1.88 | 0.539 | |
| 3u7l | UDB | Peptide deformylase | / | 0.527 | |
| 1dxy | NAD | D-2-hydroxyisocaproate dehydrogenase | 1.1.1 | 0.526 | |
| 2ew6 | Y13 | Peptide deformylase | / | 0.525 | |
| 1ix1 | BB2 | Peptide deformylase | / | 0.524 | |
| 3u04 | BB2 | Peptide deformylase | / | 0.524 | |
| 4wuc | ANP | DNA gyrase subunit B | / | 0.508 | |
| 3pn4 | BB2 | Peptide deformylase 1B, chloroplastic/mitochondrial | 3.5.1.88 | 0.507 | |
| 4e9b | BB2 | Peptide deformylase | / | 0.502 | |
| 3o3j | BB4 | Peptide deformylase 1B, chloroplastic/mitochondrial | 3.5.1.88 | 0.501 | |
| 3e3u | NVC | Peptide deformylase | 3.5.1.88 | 0.500 | |
| 2ivi | ACW | Isopenicillin N synthase | 1.21.3.1 | 0.499 | |
| 1ws1 | BB2 | Peptide deformylase 1 | / | 0.493 | |
| 4prx | ADP | DNA gyrase subunit B | / | 0.493 | |
| 2pd7 | FAD | Vivid PAS protein VVD | / | 0.489 | |
| 2rio | ADP | Serine/threonine-protein kinase/endoribonuclease IRE1 | 2.7.11.1 | 0.487 | |
| 2yyu | C5P | Orotidine 5'-phosphate decarboxylase | / | 0.487 | |
| 2ft9 | CHD | Fatty acid-binding protein 2, liver | / | 0.484 | |
| 3e8n | VRA | Dual specificity mitogen-activated protein kinase kinase 1 | 2.7.12.2 | 0.484 | |
| 4eak | ATP | 5'-AMP-activated protein kinase subunit gamma-1 | / | 0.484 | |
| 1i3m | UD1 | UDP-glucose 4-epimerase | / | 0.483 | |
| 3c21 | 2BA | DNA integrity scanning protein DisA | / | 0.483 | |
| 3zkb | ANP | DNA gyrase subunit B | / | 0.483 | |
| 1ics | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.482 | |
| 4je7 | BB2 | Peptide deformylase 1A, chloroplastic/mitochondrial | 3.5.1.88 | 0.482 | |
| 2j09 | FMN | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.481 | |
| 2voj | NAD | Alanine dehydrogenase | 1.4.1.1 | 0.479 | |
| 2ggq | TTP | Dual sugar-1-phosphate nucleotidylyltransferase | / | 0.478 | |
| 2j08 | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.478 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.477 | |
| 4m5p | FMN | NADPH dehydrogenase | / | 0.477 | |
| 1mg5 | NAI | Alcohol dehydrogenase | 1.1.1.1 | 0.476 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.475 | |
| 4jlo | ADP | Adenylate kinase | / | 0.475 | |
| 2xfs | J01 | Uncharacterized protein | / | 0.474 | |
| 3dy8 | IBM | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.474 | |
| 4wud | ANP | DNA gyrase subunit B | / | 0.474 | |
| 1ib0 | NAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.473 | |
| 2abj | CBC | Branched-chain-amino-acid aminotransferase, cytosolic | 2.6.1.42 | 0.472 | |
| 1g1a | NAD | dTDP-glucose 4,6-dehydratase | / | 0.471 | |
| 1z7e | UGA | Bifunctional polymyxin resistance protein ArnA | / | 0.471 | |
| 2c54 | NAD | GDP-mannose 3,5-epimerase | 5.1.3.18 | 0.471 | |
| 2os3 | BB2 | Peptide deformylase | / | 0.471 | |
| 4giu | 636 | Anthranilate phosphoribosyltransferase | / | 0.471 | |
| 4jld | ADP | Adenylate kinase | / | 0.471 | |
| 4pvd | NDP | NADPH-dependent methylglyoxal reductase GRE2 | / | 0.470 | |
| 1nup | NMN | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 | / | 0.469 | |
| 3lfm | 3DT | Alpha-ketoglutarate-dependent dioxygenase FTO | / | 0.469 | |
| 4jnk | ZHK | L-lactate dehydrogenase A chain | 1.1.1.27 | 0.469 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.469 | |
| 2gjn | FMN | Nitronate monooxygenase | 1.13.12.16 | 0.468 | |
| 3c1y | 2BA | DNA integrity scanning protein DisA | / | 0.468 | |
| 3e39 | FMN | Nitroreductase | / | 0.468 | |
| 1fcb | FMN | Cytochrome b2, mitochondrial | 1.1.2.3 | 0.467 | |
| 1gzu | NMN | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 | 2.7.7.1 | 0.467 | |
| 1icq | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.467 | |
| 1kbi | FMN | Cytochrome b2, mitochondrial | 1.1.2.3 | 0.467 | |
| 1lqy | BB2 | Peptide deformylase 2 | 3.5.1.88 | 0.467 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.467 | |
| 2gej | GDD | Phosphatidyl-myo-inositol mannosyltransferase | 2.4.1.57 | 0.467 | |
| 3i5z | Z48 | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.467 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.467 | |
| 1qrr | UPG | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.466 | |
| 2cft | PLP | Pyridoxal phosphate phosphatase | / | 0.466 | |
| 5bqf | NAP | Probable hydroxyacid dehydrogenase protein | / | 0.466 | |
| 6cts | CIC | Citrate synthase, mitochondrial | 2.3.3.1 | 0.466 | |
| 1u8v | FAD | 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase | / | 0.465 | |
| 2hun | NAD | 336aa long hypothetical dTDP-glucose 4,6-dehydratase | / | 0.465 | |
| 2oap | ANP | Type II secretion system protein (GspE-2) | / | 0.465 | |
| 2zts | ADP | Uncharacterized protein | / | 0.465 | |
| 3u7k | MDB | Peptide deformylase | / | 0.465 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.465 | |
| 1teh | NAD | Alcohol dehydrogenase class-3 | 1.1.1.1 | 0.464 | |
| 1wnt | NAP | L-xylulose reductase | 1.1.1.10 | 0.464 | |
| 2a1h | GBN | Branched-chain-amino-acid aminotransferase, mitochondrial | 2.6.1.42 | 0.464 | |
| 2xpw | OTC | Tetracycline repressor protein class D | / | 0.464 | |
| 3f3s | NAD | Lambda-crystallin homolog | / | 0.464 | |
| 3p7n | FMN | Light-activated DNA-binding protein EL222 | / | 0.464 | |
| 4qxp | 1YE | Stimulator of interferon genes protein | / | 0.464 | |
| 5cno | ANP | Epidermal growth factor receptor | 2.7.10.1 | 0.464 | |
| 3s79 | ASD | Aromatase | 1.14.14.14 | 0.463 | |
| 4lcj | NAD | C-terminal-binding protein 2 | / | 0.463 | |
| 4yvz | 3AT | DNA integrity scanning protein DisA | / | 0.463 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.462 | |
| 2ed3 | SAH | Diphthine synthase | / | 0.462 | |
| 2pd8 | FAD | Vivid PAS protein VVD | / | 0.462 | |
| 3dyl | PCG | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.462 | |
| 3kji | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.462 | |
| 4anx | 534 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.462 | |
| 4hj6 | FMN | LOV protein | / | 0.462 | |
| 4j31 | FAD | Kynurenine 3-monooxygenase | / | 0.462 | |
| 4yco | FMN | tRNA-dihydrouridine(16) synthase | / | 0.462 | |
| 1bw9 | NAD | Phenylalanine dehydrogenase | / | 0.461 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.461 | |
| 2vbd | V10 | Isopenicillin N synthase | 1.21.3.1 | 0.461 | |
| 3nbv | ANP | Ketohexokinase | / | 0.461 | |
| 4e90 | 7RG | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.461 | |
| 1u3d | FAD | Cryptochrome-1 | / | 0.460 | |
| 2dcn | ADP | 2-keto-3-deoxy-gluconate kinase | / | 0.460 | |
| 3a4v | NAD | NDP-sugar epimerase | / | 0.460 | |
| 4gyy | 12V | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit | / | 0.460 | |
| 5cyo | GDP | Septin-9 | / | 0.460 | |
| 1hku | NAD | C-terminal-binding protein 1 | 1.1.1 | 0.459 | |
| 1nhh | ANP | DNA mismatch repair protein MutL | / | 0.459 | |
| 2xc3 | RT8 | Steroid C26-monooxygenase | 1.14.13.141 | 0.459 | |
| 2z4s | ADP | Chromosomal replication initiator protein DnaA | / | 0.459 | |
| 3enk | UPG | UDP-glucose 4-epimerase | / | 0.459 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.459 | |
| 4l7f | 1V5 | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.459 | |
| 4loi | 1YC | Stimulator of interferon genes protein | / | 0.459 | |
| 4qxr | 1YE | Stimulator of interferon genes protein | / | 0.459 | |
| 1r8b | ATP | CCA-adding enzyme | 2.7.7.72 | 0.458 | |
| 1tll | NAP | Nitric oxide synthase, brain | 1.14.13.39 | 0.458 | |
| 2aa0 | MTP | Adenosine kinase | 2.7.1.20 | 0.458 | |
| 4b9q | ATP | Chaperone protein DnaK | / | 0.458 | |
| 4eag | ATP | 5'-AMP-activated protein kinase subunit gamma-1 | / | 0.458 | |
| 4fry | NAD | Putative signal-transduction protein with CBS domains | / | 0.458 | |
| 4i8x | 6P3 | L-lactate dehydrogenase A chain | 1.1.1.27 | 0.458 | |
| 5i4n | ATP | Tyrosine-protein kinase JAK2 | / | 0.458 | |
| 1ydt | IQB | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.457 | |
| 2aia | SB8 | Peptide deformylase | / | 0.457 | |
| 2hux | SAH | Diphthine synthase | / | 0.457 | |
| 3ge6 | FMN | Nitroreductase | / | 0.457 | |
| 3h06 | VBP | Glutamate receptor 2 | / | 0.457 | |
| 3iw1 | ASD | Steroid C26-monooxygenase | 1.14.13.141 | 0.457 | |
| 3sop | GDP | Neuronal-specific septin-3 | / | 0.457 | |
| 1bdb | NAD | Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | / | 0.456 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.456 | |
| 1j21 | ATP | Argininosuccinate synthase | / | 0.456 | |
| 1rl4 | BRR | Peptide deformylase | / | 0.456 | |
| 2bbw | GP5 | Adenylate kinase 4, mitochondrial | / | 0.456 | |
| 2z6d | FMN | Phototropin-2 | 2.7.11.1 | 0.456 | |
| 3m1v | COM | Methyl-coenzyme M reductase I subunit alpha | 2.8.4.1 | 0.456 | |
| 3m1v | COM | Methyl-coenzyme M reductase I subunit beta | 2.8.4.1 | 0.456 | |
| 3pvt | 3HC | 1,2-phenylacetyl-CoA epoxidase, subunit A | 1.14.13.149 | 0.456 | |
| 3td7 | FAD | Probable FAD-linked sulfhydryl oxidase R596 | 1.8.3.2 | 0.456 | |
| 4fxy | 0W2 | Neurolysin, mitochondrial | 3.4.24.16 | 0.456 | |
| 4ips | 1G4 | Mycocyclosin synthase | 1.14.21.9 | 0.456 | |
| 4njo | NAD | D-3-phosphoglycerate dehydrogenase, putative | / | 0.456 | |
| 4rf2 | NAP | NADPH dependent R-specific alcohol dehydrogenase | / | 0.456 | |
| 1efv | FAD | Electron transfer flavoprotein subunit alpha, mitochondrial | / | 0.455 | |
| 1iy8 | NAD | Levodione reductase | / | 0.455 | |
| 2wb2 | FAD | RE11660p | / | 0.455 | |
| 2zja | ACP | ATP-dependent DNA helicase Hel308 | / | 0.455 | |
| 3ijo | B4D | Glutamate receptor 2 | / | 0.455 | |
| 3pdu | NAP | Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase | / | 0.455 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.455 | |
| 3to3 | ATP | Petrobactin biosynthesis protein AsbB | / | 0.455 | |
| 4ycp | FMN | tRNA-dihydrouridine(16) synthase | / | 0.455 | |
| 5a3b | APR | SIR2 family protein | / | 0.455 | |
| 1aj8 | COA | Citrate synthase | / | 0.454 | |
| 1q6t | 600 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 0.454 | |
| 2g9u | G27 | Glycogen phosphorylase, muscle form | 2.4.1.1 | 0.454 | |
| 2gjl | FMN | Nitronate monooxygenase | 1.13.12.16 | 0.454 | |
| 2h21 | SAM | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic | 2.1.1.127 | 0.454 | |
| 2hu2 | NAD | C-terminal binding protein 1 | / | 0.454 | |
| 2pr5 | FMN | Blue-light photoreceptor | / | 0.454 | |
| 3ump | ATP | ATP-dependent 6-phosphofructokinase isozyme 2 | 2.7.1.11 | 0.454 | |
| 3w8q | AGS | Dual specificity mitogen-activated protein kinase kinase 1 | 2.7.12.2 | 0.454 | |
| 4n9i | PCG | Catabolite expression activator | / | 0.454 | |
| 5f54 | TMP | Single-stranded-DNA-specific exonuclease | / | 0.454 | |
| 5ftc | ADP | TPR domain protein | / | 0.454 | |
| 1egd | FAD | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.7 | 0.453 | |
| 1iqr | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.453 | |
| 1l3i | SAH | Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) | / | 0.453 | |
| 2b4q | NAP | Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase | 1.1.1.100 | 0.453 | |
| 2x06 | NAD | L-sulfolactate dehydrogenase | / | 0.453 | |
| 3af0 | GDP | Pantothenate kinase | 2.7.1.33 | 0.453 | |
| 3inv | NDP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.453 | |
| 3lzw | NAP | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.453 | |
| 4blt | APC | NTPase P4 | / | 0.453 | |
| 4dpt | AGS | Mevalonate diphosphate decarboxylase | / | 0.453 | |
| 1xag | NAD | 3-dehydroquinate synthase | / | 0.452 | |
| 2gvd | FKP | Adenylate cyclase type 2 | / | 0.452 | |
| 2gvd | FKP | Adenylate cyclase type 5 | / | 0.452 | |
| 2wq6 | FAD | RE11660p | / | 0.452 | |
| 3uyl | TYD | Probable NDP-rhamnosyltransferase | / | 0.452 | |
| 4b3a | TAC | Tetracycline repressor protein class D | / | 0.452 | |
| 1adf | TAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.451 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.451 | |
| 1kbj | FMN | Cytochrome b2, mitochondrial | 1.1.2.3 | 0.451 | |
| 1owm | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.451 | |
| 1t0l | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.451 | |
| 2eba | FAD | Putative glutaryl-CoA dehydrogenase | / | 0.451 | |
| 2ejv | NAD | L-threonine 3-dehydrogenase | / | 0.451 | |
| 2pzj | NAD | Putative nucleotide sugar epimerase/ dehydratase | / | 0.451 | |
| 2trt | TAC | Tetracycline repressor protein class D | / | 0.451 | |
| 3dga | NDP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.451 | |
| 3nxx | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 3w2e | NAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.451 | |
| 4dpu | AGS | Mevalonate diphosphate decarboxylase | / | 0.451 | |
| 1n9n | FMN | Putative blue light receptor | / | 0.450 | |
| 1qf4 | RPD | Adenylosuccinate synthetase | / | 0.450 | |
| 1tqf | 32P | Beta-secretase 1 | 3.4.23.46 | 0.450 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.450 | |
| 2jb4 | A14 | Isopenicillin N synthase | 1.21.3.1 | 0.450 | |
| 2qd4 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.450 | |
| 2ydi | YDI | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.450 | |
| 3c50 | ADP | Rhodopsin kinase | / | 0.450 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.450 | |
| 3sw8 | 5LI | Peptide deformylase | / | 0.450 | |
| 4ef9 | FMN | Dihydroorotate dehydrogenase (fumarate) | / | 0.450 | |
| 4ien | COA | Putative acyl-CoA hydrolase | / | 0.450 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.450 | |
| 2bun | FAD | AppA protein | / | 0.449 | |
| 2f7x | 4EA | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.449 | |
| 2fre | FMN | NAD(P)H-flavin oxidoreductase | / | 0.449 | |
| 2y3s | TIR | TamL | / | 0.449 | |
| 3frq | ERY | Erythromycin resistance repressor protein | / | 0.449 | |
| 3jsi | WTC | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.449 | |
| 3jzd | NAD | Maleylacetate reductase | / | 0.449 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.449 | |
| 4nr4 | 2LK | CREB-binding protein | / | 0.449 | |
| 1icu | FMN | Oxygen-insensitive NAD(P)H nitroreductase | / | 0.448 | |
| 1j39 | UPG | DNA beta-glucosyltransferase | / | 0.448 | |
| 1kp2 | ATP | Argininosuccinate synthase | 6.3.4.5 | 0.448 | |
| 1p4a | PCP | Pur operon repressor | / | 0.448 | |
| 1s3z | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.448 | |
| 1zxm | ANP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.448 | |
| 2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.448 | |
| 2clq | STU | Mitogen-activated protein kinase kinase kinase 5 | 2.7.11.25 | 0.448 | |
| 2xvv | 9DN | Serum albumin | / | 0.448 | |
| 2yy7 | NAD | L-threonine dehydrogenase | / | 0.448 | |
| 3b9l | AZZ | Serum albumin | / | 0.448 | |
| 3h2s | NDP | Putative NADH-flavin reductase | / | 0.448 | |
| 3pef | NAP | Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase | / | 0.448 | |
| 3tjs | D0R | Cytochrome P450 3A4 | / | 0.448 | |
| 4wri | OKA | Okadaic acid binding protein 2-alpha | / | 0.448 | |
| 1f0y | NAD | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.447 | |
| 1gee | NAD | Glucose 1-dehydrogenase | 1.1.1.47 | 0.447 | |
| 1m76 | NAD | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.447 | |
| 1p44 | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.447 | |
| 1qlh | NAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.447 | |
| 1xdd | AAY | Integrin alpha-L | / | 0.447 | |
| 1xel | UPG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.447 | |
| 1xjn | CDP | Vitamin B12-dependent ribonucleotide reductase | / | 0.447 | |
| 1xkv | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.447 | |
| 2b53 | D23 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
| 2egl | SAH | Diphthine synthase | / | 0.447 | |
| 2i51 | FMN | Pyridoxamine 5'-phosphate oxidase-related, FMN-binding | / | 0.447 | |
| 2ifa | FMN | Uncharacterized protein | / | 0.447 | |
| 2pb4 | SAH | Diphthine synthase | / | 0.447 | |
| 2qo9 | ANP | Ephrin type-A receptor 3 | 2.7.10.1 | 0.447 | |
| 2quj | TYM | Tryptophan--tRNA ligase, cytoplasmic | 6.1.1.2 | 0.447 | |
| 3c4z | ADP | Rhodopsin kinase | / | 0.447 | |
| 3f03 | FMN | Pentaerythritol tetranitrate reductase | / | 0.447 | |
| 3gw9 | VNI | Lanosterol 14-alpha-demethylase | / | 0.447 | |
| 3ntd | COA | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.447 | |
| 3zky | WT4 | Isopenicillin N synthase | 1.21.3.1 | 0.447 | |
| 4a83 | DXC | Major pollen allergen Bet v 1-A | / | 0.447 | |
| 4i6g | FAD | Cryptochrome-2 | / | 0.447 | |
| 4ktl | 1CQ | Cytochrome P450 | / | 0.447 | |
| 5c7o | NAD | Glyceraldehyde-3-phosphate dehydrogenase, testis-specific | 1.2.1.12 | 0.447 | |
| 1lbc | CYZ | Glutamate receptor 2 | / | 0.446 | |
| 2gek | GDP | Phosphatidyl-myo-inositol mannosyltransferase | 2.4.1.57 | 0.446 | |
| 2jdt | I5S | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.446 | |
| 2q1w | NAD | Putative nucleotide sugar epimerase/ dehydratase | / | 0.446 | |
| 2q3r | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.446 | |
| 2q85 | 973 | UDP-N-acetylenolpyruvoylglucosamine reductase | 1.3.1.98 | 0.446 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.446 | |
| 2rbe | NDP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.446 | |
| 3bw4 | FMN | Putative 2-nitropropane dioxygenase | / | 0.446 | |
| 3ibq | ATP | Pyridoxal kinase | / | 0.446 | |
| 3r83 | Z14 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.446 | |
| 4biz | ADP | Sensor histidine kinase CpxA | / | 0.446 | |
| 4iaw | LIZ | Neutrophil gelatinase-associated lipocalin | / | 0.446 | |
| 4oaq | NDP | R-specific carbonyl reductase | / | 0.446 | |
| 4u0o | MTA | Lipoyl synthase 2 | / | 0.446 | |
| 5a0y | COM | Methyl-coenzyme M reductase I subunit alpha | 2.8.4.1 | 0.446 | |
| 5a0y | COM | Methyl-coenzyme M reductase I subunit beta | 2.8.4.1 | 0.446 | |
| 1bk0 | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.445 | |
| 1byg | STU | Tyrosine-protein kinase CSK | / | 0.445 | |
| 1f20 | NAP | Nitric oxide synthase, brain | 1.14.13.39 | 0.445 | |
| 1kbo | 340 | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.445 | |
| 1kc1 | NDP | dTDP-4-dehydrorhamnose reductase | 1.1.1.133 | 0.445 | |
| 1szg | FNS | Cytochrome b2, mitochondrial | 1.1.2.3 | 0.445 | |
| 2czf | XMP | Orotidine 5'-phosphate decarboxylase | 4.1.1.23 | 0.445 | |
| 2ddo | ATP | Pyridoxine/pyridoxal/pyridoxamine kinase | / | 0.445 | |
| 2ok7 | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.445 | |
| 2q3e | NAI | UDP-glucose 6-dehydrogenase | 1.1.1.22 | 0.445 | |
| 2rlc | CHD | Choloylglycine hydrolase | 3.5.1.24 | 0.445 | |
| 2wns | OMP | Uridine 5'-monophosphate synthase | 2.4.2.10 | 0.445 | |
| 3hl0 | NAD | Maleylacetate reductase | / | 0.445 | |
| 3m2u | COM | Methyl-coenzyme M reductase I subunit alpha | 2.8.4.1 | 0.445 | |
| 4jb1 | NAP | UDP-N-acetylenolpyruvoylglucosamine reductase | / | 0.445 | |
| 4kgm | ATP | Uncharacterized protein | / | 0.445 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.445 | |
| 4zoh | FAD | Putative oxidoreductase FAD-binding subunit | / | 0.445 | |
| 1hyg | NAP | L-2-hydroxycarboxylate dehydrogenase (NAD(P)(+)) | / | 0.444 | |
| 1lrk | UD1 | UDP-glucose 4-epimerase | 5.1.3.2 | 0.444 | |
| 1m0w | ANP | Glutathione synthetase | 6.3.2.3 | 0.444 | |
| 1x7h | NDP | Putative ketoacyl reductase | 1.3.1 | 0.444 | |
| 1z45 | UPG | Bifunctional protein GAL10 | 5.1.3.2 | 0.444 | |
| 2tps | TPS | Thiamine-phosphate synthase | / | 0.444 | |
| 3dh7 | FMN | Isopentenyl-diphosphate delta-isomerase | / | 0.444 | |
| 3n87 | N87 | 3-dehydroquinate dehydratase | 4.2.1.10 | 0.444 | |
| 3vgl | ANP | Glucokinase | / | 0.444 | |
| 3zlx | 5EZ | Dual specificity mitogen-activated protein kinase kinase 1 | 2.7.12.2 | 0.444 | |
| 4ejh | 0QA | Cytochrome P450 2A13 | 1.14.14.1 | 0.444 | |
| 4f9f | GDP | Putative glycosyltransferase | / | 0.444 | |
| 4i6a | HMG | 3-hydroxy-3-methylglutaryl-coenzyme A reductase | 1.1.1.88 | 0.444 | |
| 4ig0 | 1FG | Gag-Pol polyprotein | 2.7.7.49 | 0.444 | |
| 4ipw | 1G7 | Mycocyclosin synthase | 1.14.21.9 | 0.444 | |
| 4pzr | COA | Histone acetyltransferase p300 | / | 0.444 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.444 | |
| 4yqf | GDP | Septin-9 | / | 0.444 | |
| 5eow | FAD | 6-hydroxynicotinate 3-monooxygenase | 1.14.13.114 | 0.444 | |
| 1esv | LAR | Actin, alpha skeletal muscle | / | 0.443 | |
| 1njf | AGS | DNA polymerase III subunit tau | 2.7.7.7 | 0.443 | |
| 1npt | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.443 | |
| 1q43 | CMP | Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 | / | 0.443 | |
| 1vji | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.443 | |
| 1x1c | SAH | C-20 methyltransferase | / | 0.443 | |
| 2q1s | NAI | Putative nucleotide sugar epimerase/ dehydratase | / | 0.443 | |
| 2vhv | NAI | Alanine dehydrogenase | 1.4.1.1 | 0.443 | |
| 2ya3 | J7V | 5'-AMP-activated protein kinase subunit gamma-1 | / | 0.443 | |
| 3cvu | FAD | RE11660p | / | 0.443 | |
| 3p62 | FMN | Pentaerythritol tetranitrate reductase | / | 0.443 | |
| 3phi | NDP | Shikimate dehydrogenase (NADP(+)) | / | 0.443 | |
| 3qlr | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 3r7w | GNP | GTP-binding protein GTR2 | / | 0.443 | |
| 3svj | 4LI | Peptide deformylase | / | 0.443 | |
| 3uqd | ATP | ATP-dependent 6-phosphofructokinase isozyme 2 | 2.7.1.11 | 0.443 | |
| 4b79 | NAD | Probable short-chain dehydrogenase | / | 0.443 | |
| 4bfz | ZVZ | Pantothenate kinase | 2.7.1.33 | 0.443 | |
| 4eox | 0S5 | Peptide deformylase | / | 0.443 | |
| 4k33 | ACP | Fibroblast growth factor receptor 3 | 2.7.10.1 | 0.443 | |
| 4lol | 1YE | Stimulator of interferon genes protein | / | 0.443 | |
| 4zse | ANP | Epidermal growth factor receptor | 2.7.10.1 | 0.443 | |
| 5dn3 | ATP | Aurora kinase A | 2.7.11.1 | 0.443 | |
| 1pyx | ANP | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.442 | |
| 2c29 | NAP | Dihydroflavonol 4-reductase | / | 0.442 | |
| 2o7o | DXT | Tetracycline repressor protein class D | / | 0.442 | |
| 2z6c | FMN | Phototropin-1 | 2.7.11.1 | 0.442 | |
| 3bu5 | ATP | Insulin receptor | 2.7.10.1 | 0.442 | |
| 3w2n | ROD | Dihydroorotate dehydrogenase (fumarate) | 1.3.98.1 | 0.442 | |
| 4e2b | FMN | Dehydrogenase | / | 0.442 | |
| 4fw8 | NAI | 3-oxoacyl-(Acyl-carrier-protein) reductase | / | 0.442 | |
| 4h4q | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.442 | |
| 4ike | ADP | Adenylate kinase | / | 0.442 | |
| 4m83 | ERY | Oleandomycin glycosyltransferase | 2.4.1 | 0.442 | |
| 4r1f | ADP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.442 | |
| 4zju | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.442 | |
| 1ia1 | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 1nuq | NXX | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 | / | 0.441 | |
| 1zxn | ADP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.441 | |
| 2c3q | GTX | Glutathione S-transferase theta-1 | 2.5.1.18 | 0.441 | |
| 2e8r | SAH | Diphthine synthase | / | 0.441 | |
| 2ejz | SAH | Diphthine synthase | / | 0.441 | |
| 2x7b | COA | N-alpha-acetyltransferase | 2.3.1 | 0.441 | |
| 3hmm | 855 | TGF-beta receptor type-1 | 2.7.11.30 | 0.441 | |
| 3otw | COA | Phosphopantetheine adenylyltransferase | / | 0.441 | |
| 3p82 | FMN | Pentaerythritol tetranitrate reductase | / | 0.441 | |
| 3zkd | ANP | DNA gyrase subunit B | / | 0.441 | |
| 4bb3 | KKA | Isopenicillin N synthase | 1.21.3.1 | 0.441 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.441 | |
| 4r1l | ADP | Phenylacetate-coenzyme A ligase | / | 0.441 | |
| 4s1i | PLP | Pyridoxal kinase, putative | / | 0.441 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.441 | |
| 1h73 | ANP | Homoserine kinase | 2.7.1.39 | 0.440 | |
| 1svm | ATP | Large T antigen | 3.6.4 | 0.440 | |
| 1uda | UFG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.440 | |
| 2f3r | G5P | Guanylate kinase | 2.7.4.8 | 0.440 | |
| 2jla | TPP | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase | / | 0.440 | |
| 2pan | FAD | Glyoxylate carboligase | 4.1.1.47 | 0.440 | |
| 2vwq | NAP | Glucose 1-dehydrogenase | / | 0.440 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.440 | |
| 3a7j | ADP | Serine/threonine-protein kinase 24 | 2.7.11.1 | 0.440 | |
| 3b70 | NAP | Enoyl reductase LovC | 1 | 0.440 | |
| 3cvy | FAD | RE11660p | / | 0.440 | |
| 3d84 | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 3dyn | PCG | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.440 | |
| 3ijd | C2F | Methylenetetrahydrofolate reductase | / | 0.440 | |
| 3m2v | COM | Methyl-coenzyme M reductase I subunit alpha | 2.8.4.1 | 0.440 | |
| 3mje | NDP | AmphB | / | 0.440 | |
| 3tqh | NDP | Quinone oxidoreductase | / | 0.440 | |
| 4aux | XTC | Tetracycline repressor protein class D | / | 0.440 | |
| 4axa | RKD | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.440 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.440 | |
| 4b4v | L34 | Bifunctional protein FolD | / | 0.440 | |
| 4jc5 | 1K5 | Stimulator of interferon genes protein | / | 0.440 | |
| 4qai | FMN | NADPH dehydrogenase | / | 0.440 | |
| 4xx9 | ATP | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.440 |