2.100 Å
X-ray
2008-01-24
| Name: | DNA integrity scanning protein DisA |
|---|---|
| ID: | DISA_THEMA |
| AC: | Q9WY43 |
| Organism: | Thermotoga maritima |
| Reign: | Bacteria |
| TaxID: | 243274 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 52 % |
| B | 48 % |
| B-Factor: | 26.478 |
|---|---|
| Number of residues: | 33 |
| Including | |
| Standard Amino Acids: | 33 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.985 | 1377.000 |
| % Hydrophobic | % Polar |
|---|---|
| 35.78 | 64.22 |
| According to VolSite | |

| HET Code: | 2BA |
|---|---|
| Formula: | C20H22N10O12P2 |
| Molecular weight: | 656.396 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 61.93 % |
| Polar Surface area: | 334.95 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 20 |
| H-Bond Donors: | 4 |
| Rings: | 7 |
| Aromatic rings: | 4 |
| Anionic atoms: | 2 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 67.4643 | 17.5274 | -39.7893 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O2' | N | GLY- 76 | 2.88 | 157.63 | H-Bond (Protein Donor) |
| O2'1 | N | GLY- 76 | 2.83 | 166.34 | H-Bond (Protein Donor) |
| N6 | O | LEU- 94 | 2.66 | 163.84 | H-Bond (Ligand Donor) |
| N61 | O | LEU- 94 | 2.9 | 175.92 | H-Bond (Ligand Donor) |
| N1 | N | LEU- 94 | 3 | 159.72 | H-Bond (Protein Donor) |
| N11 | N | LEU- 94 | 2.98 | 166.17 | H-Bond (Protein Donor) |
| O1P | OG1 | THR- 107 | 2.64 | 165.23 | H-Bond (Ligand Donor) |
| O1P1 | OG1 | THR- 107 | 2.52 | 164.46 | H-Bond (Protein Donor) |
| N6 | OG1 | THR- 111 | 3.25 | 129.08 | H-Bond (Ligand Donor) |
| N61 | OG1 | THR- 111 | 3.14 | 127.87 | H-Bond (Ligand Donor) |