2.400 Å
X-ray
2010-10-28
Name: | Serum albumin |
---|---|
ID: | ALBU_HUMAN |
AC: | P02768 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 49.462 |
---|---|
Number of residues: | 21 |
Including | |
Standard Amino Acids: | 21 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.507 | 874.125 |
% Hydrophobic | % Polar |
---|---|
65.25 | 34.75 |
According to VolSite |
HET Code: | 9DN |
---|---|
Formula: | C16H18N3O5S |
Molecular weight: | 364.396 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 45.34 % |
Polar Surface area: | 141.01 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 2 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
29.1111 | 8.87616 | 30.7049 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C12 | CG2 | ILE- 142 | 3.87 | 0 | Hydrophobic |
C8 | CD1 | ILE- 142 | 4.08 | 0 | Hydrophobic |
C12 | CZ | PHE- 149 | 4.01 | 0 | Hydrophobic |
C12 | CD1 | LEU- 154 | 3.51 | 0 | Hydrophobic |
C11 | CD1 | PHE- 157 | 3.28 | 0 | Hydrophobic |
C12 | CD2 | PHE- 157 | 4.49 | 0 | Hydrophobic |
C11 | CE2 | TYR- 161 | 4.36 | 0 | Hydrophobic |
C7 | CG | ARG- 186 | 3.76 | 0 | Hydrophobic |
OXT | NZ | LYS- 190 | 3.69 | 0 | Ionic (Protein Cationic) |
C2 | CG | LYS- 190 | 4 | 0 | Hydrophobic |