2.900 Å
X-ray
2002-06-06
Name: | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 |
---|---|
ID: | NMNA1_HUMAN |
AC: | Q9HAN9 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.7.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 53.849 |
---|---|
Number of residues: | 26 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.013 | 1127.250 |
% Hydrophobic | % Polar |
---|---|
43.41 | 56.59 |
According to VolSite |
HET Code: | NMN |
---|---|
Formula: | C11H14N2O8P |
Molecular weight: | 333.211 g/mol |
DrugBank ID: | DB03227 |
Buried Surface Area: | 60.61 % |
Polar Surface area: | 178.89 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 2 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
-15.5635 | 57.6095 | 41.2175 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3P | N | SER- 16 | 2.74 | 153.35 | H-Bond (Protein Donor) |
O3P | OG | SER- 16 | 2.54 | 149.93 | H-Bond (Protein Donor) |
O2P | OG | SER- 16 | 3.44 | 127.45 | H-Bond (Protein Donor) |
O3P | NZ | LYS- 57 | 3.12 | 127.13 | H-Bond (Protein Donor) |
O2P | NZ | LYS- 57 | 2.89 | 155.43 | H-Bond (Protein Donor) |
O3P | NZ | LYS- 57 | 3.12 | 0 | Ionic (Protein Cationic) |
O2P | NZ | LYS- 57 | 2.89 | 0 | Ionic (Protein Cationic) |
O2R | NE1 | TRP- 92 | 3.13 | 146.86 | H-Bond (Protein Donor) |
C3 | CB | THR- 95 | 4.29 | 0 | Hydrophobic |
O7 | N | LEU- 96 | 3.5 | 138.19 | H-Bond (Protein Donor) |
C5R | CD2 | LEU- 159 | 3.75 | 0 | Hydrophobic |
C5 | CG | LEU- 168 | 4.07 | 0 | Hydrophobic |
DuAr | DuAr | TRP- 169 | 3.76 | 0 | Aromatic Face/Face |