1.900 Å
X-ray
2003-02-01
| Name: | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 |
|---|---|
| ID: | NMNA3_HUMAN |
| AC: | Q96T66 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 11 % |
| B | 89 % |
| B-Factor: | 32.739 |
|---|---|
| Number of residues: | 35 |
| Including | |
| Standard Amino Acids: | 28 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 7 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.020 | 2747.250 |
| % Hydrophobic | % Polar |
|---|---|
| 40.91 | 59.09 |
| According to VolSite | |

| HET Code: | NMN |
|---|---|
| Formula: | C11H14N2O8P |
| Molecular weight: | 333.211 g/mol |
| DrugBank ID: | DB03227 |
| Buried Surface Area: | 52.06 % |
| Polar Surface area: | 178.89 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 8 |
| H-Bond Donors: | 3 |
| Rings: | 2 |
| Aromatic rings: | 1 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| 0.231727 | -9.01123 | 22.5584 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C3R | CG2 | VAL- 49 | 4.26 | 0 | Hydrophobic |
| C5R | CZ | TYR- 53 | 4.33 | 0 | Hydrophobic |
| C2R | CZ | TYR- 53 | 3.84 | 0 | Hydrophobic |
| O2R | NE1 | TRP- 90 | 2.84 | 177.08 | H-Bond (Protein Donor) |
| O7 | N | THR- 93 | 3.09 | 151.1 | H-Bond (Protein Donor) |
| N7 | O | LEU- 147 | 2.76 | 148.17 | H-Bond (Ligand Donor) |
| C5 | CG | LEU- 147 | 3.81 | 0 | Hydrophobic |
| DuAr | DuAr | TRP- 148 | 3.73 | 0 | Aromatic Face/Face |
| O3R | O | HOH- 503 | 2.96 | 128.42 | H-Bond (Ligand Donor) |
| O7 | O | HOH- 540 | 2.73 | 179.99 | H-Bond (Protein Donor) |
| O2R | O | HOH- 568 | 2.89 | 140.36 | H-Bond (Ligand Donor) |
| N7 | O | HOH- 599 | 2.86 | 164.36 | H-Bond (Ligand Donor) |