sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1kmq | GNP | Transforming protein RhoA |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1kmq | GNP | Transforming protein RhoA | / | 1.171 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 1.090 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 1.062 | |
| 4xoi | GTP | Transforming protein RhoA | / | 1.053 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.049 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.048 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.040 | |
| 1s1c | GNP | Transforming protein RhoA | / | 1.040 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 1.038 | |
| 3rs0 | GNP | GTPase HRas | / | 1.038 | |
| 3rsl | GNP | GTPase HRas | / | 1.038 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 1.038 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 1.037 | |
| 3oiu | GNP | GTPase HRas | / | 1.036 | |
| 3v4f | GNP | GTPase HRas | / | 1.034 | |
| 4dlt | GNP | GTPase HRas | / | 1.034 | |
| 4dlv | GNP | GTPase HRas | / | 1.034 | |
| 3rs4 | GNP | GTPase HRas | / | 1.033 | |
| 3rs5 | GNP | GTPase HRas | / | 1.033 | |
| 3rs7 | GNP | GTPase HRas | / | 1.033 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 1.033 | |
| 4dlz | GNP | GTPase HRas | / | 1.032 | |
| 2rgc | GNP | GTPase HRas | / | 1.031 | |
| 5b2z | GNP | GTPase HRas | / | 1.031 | |
| 4dlx | GNP | GTPase HRas | / | 1.030 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 1.025 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 1.024 | |
| 3lbn | GNP | GTPase HRas | / | 1.022 | |
| 3oiw | GNP | GTPase HRas | / | 1.020 | |
| 3lbi | GNP | GTPase HRas | / | 1.018 | |
| 4dlw | GNP | GTPase HRas | / | 1.018 | |
| 2rgb | GNP | GTPase HRas | / | 1.015 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 1.014 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 1.013 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 1.011 | |
| 2c5l | GTP | GTPase HRas | / | 1.007 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 1.007 | |
| 4xsg | GSP | Transforming protein RhoA | / | 1.006 | |
| 3i3s | GNP | GTPase HRas | / | 1.005 | |
| 3k8y | GNP | GTPase HRas | / | 1.005 | |
| 4g0n | GNP | GTPase HRas | / | 1.004 | |
| 4l9w | GNP | GTPase HRas | / | 1.004 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.002 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 1.001 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 1.001 | |
| 4mit | GTP | Rho-related protein racC | / | 1.001 | |
| 3oiv | GNP | GTPase HRas | / | 0.999 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.999 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.995 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.994 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 0.994 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 0.992 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 0.992 | |
| 2rge | GNP | GTPase HRas | / | 0.990 | |
| 3lbh | GNP | GTPase HRas | / | 0.988 | |
| 4nyj | GNP | GTPase HRas | / | 0.988 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.986 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.984 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 0.983 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 0.981 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.980 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.980 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.979 | |
| 3ddc | GNP | GTPase HRas | / | 0.978 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.972 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.971 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 0.971 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.969 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.968 | |
| 4k81 | GTP | GTPase HRas | / | 0.967 | |
| 4nyi | GNP | GTPase HRas | / | 0.965 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 0.965 | |
| 3l8y | GNP | GTPase HRas | / | 0.964 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.962 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.959 | |
| 3tgp | GNP | GTPase HRas | / | 0.958 | |
| 2rgg | GNP | GTPase HRas | / | 0.957 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.956 | |
| 4dls | GNP | GTPase HRas | / | 0.956 | |
| 3k9l | GNP | GTPase HRas | / | 0.955 | |
| 4dsn | GCP | GTPase KRas | / | 0.949 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.946 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.944 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 0.943 | |
| 4xvq | GNP | GTPase HRas | / | 0.943 | |
| 4dso | GSP | GTPase KRas | / | 0.942 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.939 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.938 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.938 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 0.937 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 0.934 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 0.931 | |
| 4xvr | GNP | GTPase HRas | / | 0.931 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 0.930 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.929 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 0.928 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.922 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.913 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.913 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.911 | |
| 1lfd | GNP | GTPase HRas | / | 0.908 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.907 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.905 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.905 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.900 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.898 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.896 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.895 | |
| 3kud | GDP | GTPase HRas | / | 0.895 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.894 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.894 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.893 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.893 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.893 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.892 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 0.890 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.889 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.888 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.887 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.887 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.885 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.883 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.881 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.880 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.879 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.878 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.877 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.874 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.873 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.870 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.869 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.867 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.867 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.864 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.864 | |
| 2w2v | GTP | Ras-related C3 botulinum toxin substrate 2 | / | 0.863 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.860 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.860 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.860 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.860 | |
| 4db1 | ANP | Myosin-7 | / | 0.860 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.860 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.859 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.857 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.857 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.853 | |
| 3zfd | ANP | Chromosome-associated kinesin KIF4 | / | 0.853 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.849 | |
| 3ref | GDP | Rho family GTPase | / | 0.849 | |
| 4q03 | GDP | GTPase KRas | / | 0.849 | |
| 1fmw | ATP | Myosin-2 heavy chain | / | 0.848 | |
| 3ftq | GNP | Septin-2 | / | 0.848 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.846 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.845 | |
| 4dsu | GDP | GTPase KRas | / | 0.845 | |
| 4epx | GDP | GTPase KRas | / | 0.844 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.841 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.840 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.839 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.837 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.836 | |
| 4tl6 | ANP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.836 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.835 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.834 | |
| 4dvg | GSP | Rho family GTPase | / | 0.834 | |
| 4tl7 | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.833 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.832 | |
| 4lv6 | GDP | GTPase KRas | / | 0.831 | |
| 4epw | GDP | GTPase KRas | / | 0.829 | |
| 4q02 | GDP | GTPase KRas | / | 0.829 | |
| 4wa7 | GDP | GTPase KRas | / | 0.829 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.828 | |
| 4ldj | GDP | GTPase KRas | / | 0.828 | |
| 1f5n | GNP | Guanylate-binding protein 1 | / | 0.827 | |
| 2ce2 | GDP | GTPase HRas | / | 0.827 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.825 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.824 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.824 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.824 | |
| 2jlr | ANP | Genome polyprotein | 3.4.21.91 | 0.823 | |
| 4ki0 | ANP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.823 | |
| 4tq9 | GDP | GTPase KRas | / | 0.822 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.821 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.820 | |
| 2cl6 | CAG | GTPase HRas | / | 0.817 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.816 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.816 | |
| 1ayl | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.814 | |
| 4lpk | GDP | GTPase KRas | / | 0.814 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.813 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.811 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.808 | |
| 4ql3 | GDP | GTPase KRas | / | 0.808 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.806 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.805 | |
| 4idp | GNP | Atlastin-1 | 3.6.5 | 0.805 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.802 | |
| 4luc | GDP | GTPase KRas | / | 0.802 | |
| 5l3r | GCP | Cell division protein FtsY homolog, chloroplastic | / | 0.802 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.801 | |
| 3a4l | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.801 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.799 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.798 | |
| 4cei | ANP | ATP-dependent helicase/deoxyribonuclease subunit B | 3.1 | 0.797 | |
| 4l9s | GDP | GTPase HRas | / | 0.796 | |
| 1ank | ANP | Adenylate kinase | / | 0.794 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.793 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.793 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.791 | |
| 5l3s | GNP | Signal recognition particle receptor FtsY | / | 0.791 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.790 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.790 | |
| 1a4r | GNH | Cell division control protein 42 homolog | / | 0.788 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.788 | |
| 4ncl | GDP | Eukaryotic translation initiation factor 5B | / | 0.788 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.788 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.787 | |
| 2olq | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.787 | |
| 4l8g | GDP | GTPase KRas | / | 0.784 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.783 | |
| 2fna | ADP | Uncharacterized protein | / | 0.781 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.781 | |
| 1os1 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.780 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.780 | |
| 4tlb | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.780 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.780 | |
| 4tlc | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.779 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.779 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.778 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.778 | |
| 4obe | GDP | GTPase KRas | / | 0.778 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.777 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.777 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.777 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.775 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.774 | |
| 1aq2 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.773 | |
| 1khe | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.773 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.773 | |
| 4cid | ANP | EH domain-containing protein 2 | / | 0.772 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.771 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.771 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.771 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.771 | |
| 2db3 | ANP | ATP-dependent RNA helicase vasa, isoform A | 3.6.4.13 | 0.770 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.770 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.768 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.768 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.768 | |
| 4ihq | ADP | Conserved Archaeal protein | / | 0.768 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.766 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.766 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.765 | |
| 2zet | GTP | Ras-related protein Rab-27B | / | 0.765 | |
| 4oi4 | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.765 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.764 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.764 | |
| 4tl8 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.764 | |
| 4asu | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.763 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.763 | |
| 2j7p | GNP | Signal recognition particle protein | / | 0.762 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 0.762 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.762 | |
| 1wbb | ADP | DNA mismatch repair protein MutS | / | 0.760 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.760 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.759 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.757 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.757 | |
| 3c41 | ANP | Amino acid ABC transporter | / | 0.757 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.756 | |
| 2r9v | ATP | ATP synthase subunit alpha | / | 0.756 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.755 | |
| 3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.754 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.753 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.753 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.753 | |
| 4x8l | AP5 | Adenylate kinase | / | 0.753 | |
| 3nbz | GTP | GTP-binding nuclear protein Ran | / | 0.752 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.751 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.750 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.748 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.747 | |
| 2uyi | ADP | Kinesin-like protein KIF11 | / | 0.747 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.746 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.746 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.746 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.745 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.743 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.743 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.743 | |
| 3sqw | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.743 | |
| 2zts | ADP | Uncharacterized protein | / | 0.742 | |
| 4gzm | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.742 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.741 | |
| 3i5x | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.741 | |
| 4jl5 | ADP | Adenylate kinase | / | 0.741 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.740 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.740 | |
| 4jlo | ADP | Adenylate kinase | / | 0.740 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.739 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.739 | |
| 4bec | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.738 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.737 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.737 | |
| 1ii6 | ADP | Kinesin-like protein KIF11 | / | 0.736 | |
| 1svw | GTP | Probable GTP-binding protein EngB | / | 0.736 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.736 | |
| 1l2t | ATP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.735 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.735 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.731 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.731 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.731 | |
| 3pyz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.731 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.731 | |
| 4lrw | GDP | GTPase KRas | / | 0.731 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.731 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.730 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.730 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.730 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.729 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.729 | |
| 2dwp | ACP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.728 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.728 | |
| 3q9l | ATP | Septum site-determining protein MinD | / | 0.726 | |
| 1xmv | ADP | Protein RecA | / | 0.725 | |
| 1z6t | ADP | Apoptotic protease-activating factor 1 | / | 0.725 | |
| 4v02 | ATP | Site-determining protein | / | 0.725 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.724 | |
| 3m0e | ATP | Transcriptional regulator (NtrC family) | / | 0.723 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.723 | |
| 5cyo | GDP | Septin-9 | / | 0.723 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.722 | |
| 3moh | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.722 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.722 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.721 | |
| 1xef | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.721 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.721 | |
| 4be7 | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.721 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.720 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.720 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.719 | |
| 4ike | ADP | Adenylate kinase | / | 0.719 | |
| 4xvu | ATP | ATPase GET3 | / | 0.719 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.717 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.715 | |
| 4tla | ADP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.714 | |
| 4ymu | ATP | ABC-type polar amino acid transport system, ATPase component | / | 0.714 | |
| 4yqf | GDP | Septin-9 | / | 0.714 | |
| 5ftc | ADP | TPR domain protein | / | 0.714 | |
| 3hpr | AP5 | Adenylate kinase | / | 0.712 | |
| 1xnj | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | 2.7.1.25 | 0.711 | |
| 3qcz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.710 | |
| 2jj1 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.709 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.709 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.708 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.708 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.707 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.707 | |
| 2x7e | ADP | Kinesin-like protein KIF11 | / | 0.707 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.707 | |
| 4x8o | AP5 | Adenylate kinase | / | 0.707 | |
| 1gqy | ACP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.706 | |
| 1xms | ANP | Protein RecA | / | 0.706 | |
| 1h8h | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.705 | |
| 1h8h | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.705 | |
| 3mle | ADP | ATP-dependent dethiobiotin synthetase BioD | 6.3.3.3 | 0.705 | |
| 4r9u | ANP | Vitamin B12 import ATP-binding protein BtuD | / | 0.705 | |
| 1in5 | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.704 | |
| 1ny5 | ADP | Transcriptional regulator (NtrC family) | / | 0.704 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.704 | |
| 2fgj | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.704 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.704 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.704 | |
| 2c96 | ATP | Psp operon transcriptional activator | / | 0.703 | |
| 4jld | ADP | Adenylate kinase | / | 0.703 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.702 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.702 | |
| 4hse | ADP | Chaperone protein ClpB | / | 0.702 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.700 | |
| 3k3b | ADP | Kinesin-like protein KIF11 | / | 0.699 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.698 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.698 | |
| 2ad5 | ADP | CTP synthase | / | 0.697 | |
| 4pl0 | ANP | Microcin-J25 export ATP-binding/permease protein McjD | / | 0.696 | |
| 1nly | AGS | Cag alpha | / | 0.695 | |
| 1svm | ATP | Large T antigen | 3.6.4 | 0.695 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.694 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.694 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.694 | |
| 2vos | ADP | Folylpolyglutamate synthase | / | 0.694 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.693 | |
| 3ieu | GDP | GTPase Era | / | 0.693 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.691 | |
| 2c9o | ADP | RuvB-like 1 | 3.6.4.12 | 0.691 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.691 | |
| 2msc | GDP | MHC class I alpha chain | / | 0.691 | |
| 2bbw | GP5 | Adenylate kinase 4, mitochondrial | / | 0.690 | |
| 2vor | ACP | Folylpolyglutamate synthase | / | 0.690 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.690 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.689 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.689 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.688 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.688 | |
| 2xae | ADP | Kinesin-like protein KIF11 | / | 0.687 | |
| 4wpu | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.687 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.686 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.686 | |
| 3dl0 | AP5 | Adenylate kinase | / | 0.686 | |
| 4c30 | ANP | DNA helicase | / | 0.686 | |
| 4d81 | ADP | AAA ATPase, central domain protein | / | 0.686 | |
| 2g1q | ADP | Kinesin-like protein KIF11 | / | 0.685 | |
| 2zro | ADP | Protein RecA | / | 0.684 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.684 | |
| 3l9h | ADP | Kinesin-like protein KIF11 | / | 0.684 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.684 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.683 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.683 | |
| 1bif | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.681 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.681 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.681 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.679 | |
| 2c9c | ATP | Psp operon transcriptional activator | / | 0.679 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.679 | |
| 4yer | ADP | Antibiotic ABC transporter, ATP-binding protein, putative | / | 0.679 | |
| 1ht2 | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.678 | |
| 4ww0 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.677 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.676 | |
| 1e1q | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.675 | |
| 1e1q | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.675 | |
| 2r6g | ATP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.675 | |
| 4lja | ACP | Chaperone protein ClpB | / | 0.675 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.674 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.674 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.674 | |
| 1mez | GDP | Adenylosuccinate synthetase isozyme 1 | / | 0.673 | |
| 3sop | GDP | Neuronal-specific septin-3 | / | 0.671 | |
| 2zfi | ADP | Kinesin-like protein KIF1A | / | 0.670 | |
| 1s3s | ADP | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.668 | |
| 3c15 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.668 | |
| 4hut | ATP | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 2.5.1.17 | 0.667 | |
| 2xsz | ATP | RuvB-like 2 | 3.6.4.12 | 0.666 | |
| 1kqm | ANP | Myosin heavy chain, striated muscle | / | 0.665 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.665 | |
| 3tlx | ADP | Adenylate kinase 2 | / | 0.664 | |
| 2fgk | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.663 | |
| 5dac | AGS | Uncharacterized protein | / | 0.663 | |
| 1sxj | AGS | Replication factor C subunit 1 | / | 0.662 | |
| 4mkh | AP5 | Adenylate kinase | / | 0.662 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.661 | |
| 3kji | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.661 | |
| 1ohh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.660 | |
| 1ohh | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.660 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.659 | |
| 4xjx | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.658 | |
| 3dkv | AP5 | Adenylate kinase | / | 0.654 | |
| 2dft | ADP | Shikimate kinase | 2.7.1.71 | 0.653 | |
| 4c2u | ANP | DNA helicase | / | 0.653 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.652 | |
| 4cvm | ANP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.652 | |
| 3hiy | UTP | Uncharacterized protein | / | 0.651 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.651 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.651 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.650 |