Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3evj | NTO | Antithrombin-III |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 3evj | NTO | Antithrombin-III | / | 1.000 | |
| 1hb1 | OCV | Isopenicillin N synthase | 1.21.3.1 | 0.507 | |
| 3s55 | NAD | Putative short-chain dehydrogenase/reductase | / | 0.500 | |
| 4apu | A2K | Progesterone receptor | / | 0.499 | |
| 2d29 | FAD | Acyl-CoA dehydrogenase | / | 0.495 | |
| 4if5 | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.494 | |
| 2bjs | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.491 | |
| 3pch | CHB | Protocatechuate 3,4-dioxygenase beta chain | 1.13.11.3 | 0.490 | |
| 1xdd | AAY | Integrin alpha-L | / | 0.486 | |
| 1eyy | NAP | NADP-dependent fatty aldehyde dehydrogenase | 1.2.1.4 | 0.483 | |
| 5kf8 | ACO | Predicted acetyltransferase | / | 0.482 | |
| 1eii | RTL | Retinol-binding protein 2 | / | 0.480 | |
| 2fr3 | REA | Cellular retinoic acid-binding protein 2 | / | 0.480 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.480 | |
| 2x9d | ITC | Tetracycline repressor protein class D | / | 0.480 | |
| 3eku | CY9 | Actin-5C | / | 0.480 | |
| 2ym1 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.479 | |
| 3mjr | AC2 | Deoxycytidine kinase | 2.7.1.74 | 0.479 | |
| 3pcg | 4HP | Protocatechuate 3,4-dioxygenase alpha chain | 1.13.11.3 | 0.479 | |
| 3pcg | 4HP | Protocatechuate 3,4-dioxygenase beta chain | 1.13.11.3 | 0.479 | |
| 5efw | FMN | NPH1-1 | / | 0.479 | |
| 3k99 | PFT | Heat shock protein HSP 90-alpha | / | 0.478 | |
| 1vbi | NAD | Malate/L-lactate dehydrogenase family protein | / | 0.476 | |
| 2pnu | ENM | Androgen receptor | / | 0.476 | |
| 2v4l | ABJ | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.476 | |
| 2bu9 | HFV | Isopenicillin N synthase | 1.21.3.1 | 0.475 | |
| 4ien | COA | Putative acyl-CoA hydrolase | / | 0.474 | |
| 4psb | GA3 | Cytokinin-specific binding protein | / | 0.474 | |
| 1qiq | ACC | Isopenicillin N synthase | 1.21.3.1 | 0.472 | |
| 1std | BFS | Scytalone dehydratase | 4.2.1.94 | 0.472 | |
| 2chx | 090 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.472 | |
| 2cbr | A80 | Cellular retinoic acid-binding protein 1 | / | 0.471 | |
| 3u2m | FAD | FAD-linked sulfhydryl oxidase ALR | 1.8.3.2 | 0.471 | |
| 3vri | 1KX | HLA class I histocompatibility antigen, B-57 alpha chain | / | 0.471 | |
| 4wda | 2AM | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.471 | |
| 1qjf | ACS | Isopenicillin N synthase | 1.21.3.1 | 0.470 | |
| 2yq9 | 2AM | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.470 | |
| 3u2l | FAD | FAD-linked sulfhydryl oxidase ALR | 1.8.3.2 | 0.470 | |
| 4cuk | NAI | D-lactate dehydrogenase | / | 0.470 | |
| 4fvr | ATP | Tyrosine-protein kinase JAK2 | / | 0.470 | |
| 4ozt | P1A | Ecdysone receptor, putative | / | 0.470 | |
| 1toi | HCI | Aspartate aminotransferase | 2.6.1.1 | 0.469 | |
| 2vbp | VB1 | Isopenicillin N synthase | 1.21.3.1 | 0.469 | |
| 4ku5 | DCC | 3-oxoacyl-[ACP] synthase III | / | 0.469 | |
| 4wdf | A2P | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.469 | |
| 2jc6 | QPP | Calcium/calmodulin-dependent protein kinase type 1D | 2.7.11.17 | 0.468 | |
| 3dsr | ADP | V-type ATP synthase beta chain | / | 0.468 | |
| 1swt | BTN | Streptavidin | / | 0.467 | |
| 4gs4 | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.467 | |
| 4o8j | ADN | RNA 3'-terminal phosphate cyclase | 6.5.1.4 | 0.467 | |
| 2q61 | SF1 | Peroxisome proliferator-activated receptor gamma | / | 0.466 | |
| 2wo7 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.466 | |
| 3f3s | NAD | Lambda-crystallin homolog | / | 0.466 | |
| 3ru9 | NAD | UDP-N-acetylglucosamine 4-epimerase | / | 0.466 | |
| 4a2a | ATP | Cell division protein FtsA | / | 0.466 | |
| 4ht2 | V50 | Carbonic anhydrase 12 | 4.2.1.1 | 0.466 | |
| 4uyf | 73B | Bromodomain-containing protein 2 | / | 0.466 | |
| 4y9x | UPG | Glucosyl-3-phosphoglycerate synthase | 2.4.1.266 | 0.466 | |
| 1xkd | NAP | Isocitrate dehydrogenase [NADP] | / | 0.465 | |
| 2c2a | ADP | Sensor histidine kinase | / | 0.465 | |
| 2pda | TPP | Pyruvate synthase | / | 0.465 | |
| 3f10 | 8HG | 8-oxoguanine-DNA-glycosylase | / | 0.465 | |
| 1mzn | BM6 | Retinoic acid receptor RXR-alpha | / | 0.464 | |
| 3g1l | RF2 | HTH-type transcriptional regulator EthR | / | 0.464 | |
| 3wv9 | FEG | Hmd co-occurring protein HcgE | / | 0.464 | |
| 4avl | TMP | Polymerase acidic protein | / | 0.464 | |
| 4nd3 | NAD | Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase | / | 0.464 | |
| 1g28 | FMN | PHY3 | / | 0.463 | |
| 1mvt | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.463 | |
| 1oc1 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.463 | |
| 1r6g | 442 | Thyroid hormone receptor beta | / | 0.463 | |
| 1sd2 | MTH | S-methyl-5'-thioadenosine phosphorylase | / | 0.463 | |
| 2yig | 5EL | Collagenase 3 | 3.4.24 | 0.463 | |
| 4ie6 | UN9 | Alpha-ketoglutarate-dependent dioxygenase FTO | / | 0.463 | |
| 1bwl | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.462 | |
| 1thn | ADP | Anti-sigma F factor | / | 0.462 | |
| 2yp0 | OVE | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.462 | |
| 3q33 | ACO | Histone acetyltransferase RTT109 | 2.3.1.48 | 0.462 | |
| 4e0h | FAD | Mitochondrial FAD-linked sulfhydryl oxidase ERV1 | 1.8.3.2 | 0.462 | |
| 4egn | TWO | Cytochrome P450 | / | 0.462 | |
| 1hov | I52 | 72 kDa type IV collagenase | 3.4.24.24 | 0.461 | |
| 2ow9 | SP6 | Collagenase 3 | 3.4.24 | 0.461 | |
| 3em0 | CHD | Fatty acid-binding protein 6, ileal (gastrotropin) | / | 0.461 | |
| 3gfb | NAD | L-threonine 3-dehydrogenase | / | 0.461 | |
| 3glm | COO | Glutaconyl-CoA decarboxylase alpha subunit | / | 0.461 | |
| 3jun | AKD | Phenazine biosynthesis protein A/B | / | 0.461 | |
| 4a6n | FAD | TetX family tetracycline inactivation enzyme | / | 0.461 | |
| 1bcp | ATP | Pertussis toxin subunit 4 | / | 0.460 | |
| 1bcp | ATP | Pertussis toxin subunit 5 | / | 0.460 | |
| 1mvc | BM6 | Retinoic acid receptor RXR-alpha | / | 0.460 | |
| 1rft | PXM | Pyridoxal kinase | 2.7.1.35 | 0.460 | |
| 2j3j | HC4 | NADPH-dependent oxidoreductase 2-alkenal reductase | 1.3.1.74 | 0.460 | |
| 3dv3 | MEK | Dual specificity mitogen-activated protein kinase kinase 1 | 2.7.12.2 | 0.460 | |
| 3f7b | AG5 | Carbonic anhydrase 4 | 4.2.1.1 | 0.460 | |
| 3jzf | JZK | Biotin carboxylase | 6.3.4.14 | 0.460 | |
| 4k6f | NAP | Putative Acetoacetyl-CoA reductase | / | 0.460 | |
| 5kf9 | ACO | Predicted acetyltransferase | / | 0.460 | |
| 1zdw | FLV | Prenyltransferase | / | 0.459 | |
| 3da1 | FAD | Glycerol-3-phosphate dehydrogenase | / | 0.459 | |
| 4d7m | TDC | Tetracycline repressor protein class D | / | 0.459 | |
| 4m9a | FDA | Acyl-CoA dehydrogenase | / | 0.459 | |
| 1fwk | ADP | Homoserine kinase | 2.7.1.39 | 0.458 | |
| 1nm6 | L86 | Prothrombin | 3.4.21.5 | 0.458 | |
| 1req | DCA | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 | 0.458 | |
| 1txt | CAA | HMG-CoA synthase | / | 0.458 | |
| 2g78 | REA | Cellular retinoic acid-binding protein 2 | / | 0.458 | |
| 2vos | ADP | Folylpolyglutamate synthase | / | 0.458 | |
| 2z0y | SAM | Ribosomal RNA small subunit methyltransferase E | / | 0.458 | |
| 3bgx | MEF | Thymidylate synthase | / | 0.458 | |
| 3bqd | DAY | Glucocorticoid receptor | / | 0.458 | |
| 3qvw | NAD | Myo-inositol-1-phosphate synthase (Ino1) | / | 0.458 | |
| 4cer | VL4 | Integrase | / | 0.458 | |
| 4fqs | LYA | Thymidylate synthase ThyA | / | 0.458 | |
| 4jlm | 1NN | Deoxycytidine kinase | 2.7.1.74 | 0.458 | |
| 4zj8 | SUV | Orexin receptor type 1 | / | 0.458 | |
| 1cbq | RE9 | Cellular retinoic acid-binding protein 2 | / | 0.457 | |
| 1e7a | PFL | Serum albumin | / | 0.457 | |
| 1g7v | PAI | 2-dehydro-3-deoxyphosphooctonate aldolase | 2.5.1.55 | 0.457 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.457 | |
| 5bsr | COA | 4-coumarate--CoA ligase 2 | 6.2.1.12 | 0.457 | |
| 5dp2 | NAP | CurF | / | 0.457 | |
| 3sn6 | P0G | Beta-2 adrenergic receptor | / | 0.457 | |
| 1rdt | L79 | Retinoic acid receptor RXR-alpha | / | 0.456 | |
| 1uzw | CDH | Isopenicillin N synthase | 1.21.3.1 | 0.456 | |
| 2a4z | BYM | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.456 | |
| 2c27 | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.456 | |
| 2vcm | M11 | Isopenicillin N synthase | 1.21.3.1 | 0.456 | |
| 3ghw | GHW | Dihydrofolate reductase | 1.5.1.3 | 0.456 | |
| 4ced | 9NS | Integrase | / | 0.456 | |
| 4eji | 0QA | Cytochrome P450 2A13 | 1.14.14.1 | 0.456 | |
| 4jzr | 4JR | Egl nine homolog 1 | / | 0.456 | |
| 4k6i | 9RA | Retinoic acid receptor RXR-alpha | / | 0.456 | |
| 4tmc | FMN | Old yellow enzyme | / | 0.456 | |
| 1lc3 | NAD | Biliverdin reductase A | 1.3.1.24 | 0.455 | |
| 2vig | FAD | Short-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.1 | 0.455 | |
| 2vo7 | M05 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.455 | |
| 2wpw | ACO | Orf14 | / | 0.455 | |
| 3nx2 | FER | Ferulic acid decarboxylase | / | 0.455 | |
| 4anu | EM7 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.455 | |
| 1cqp | 803 | Integrin alpha-L | / | 0.454 | |
| 1juv | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.454 | |
| 1yw7 | A41 | Methionine aminopeptidase 2 | / | 0.454 | |
| 2jl1 | NAP | Triphenylmethane reductase | / | 0.454 | |
| 2y60 | M8F | Isopenicillin N synthase | 1.21.3.1 | 0.454 | |
| 2y6f | M9F | Isopenicillin N synthase | 1.21.3.1 | 0.454 | |
| 3b1j | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.454 | |
| 3f7u | AG4 | Carbonic anhydrase 4 | 4.2.1.1 | 0.454 | |
| 3zbz | OVE | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.454 | |
| 4img | NGF | N-acetylneuraminate lyase | / | 0.454 | |
| 4rrm | A3T | Probable threonine--tRNA ligase 2 | 6.1.1.3 | 0.454 | |
| 1b4p | GPS | Glutathione S-transferase Mu 2 | / | 0.453 | |
| 1dor | FMN | Dihydroorotate dehydrogenase A (fumarate) | 1.3.98.1 | 0.453 | |
| 1fm6 | 9CR | Retinoic acid receptor RXR-alpha | / | 0.453 | |
| 1g05 | BBH | Stromelysin-1 | 3.4.24.17 | 0.453 | |
| 1kt3 | RTL | Retinol-binding protein 4 | / | 0.453 | |
| 1p4a | PCP | Pur operon repressor | / | 0.453 | |
| 1uyf | PU1 | Heat shock protein HSP 90-alpha | / | 0.453 | |
| 1x2h | LPA | Lipoate-protein ligase A | 6.3.1.20 | 0.453 | |
| 3kvx | FMY | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.453 | |
| 3q43 | D66 | M1 family aminopeptidase | 3.4.11 | 0.453 | |
| 3tk0 | FAD | FAD-linked sulfhydryl oxidase ALR | 1.8.3.2 | 0.453 | |
| 4co4 | ATP | Nitrogen regulatory protein P-II 1 | / | 0.453 | |
| 4ok1 | 198 | Androgen receptor | / | 0.453 | |
| 4qys | PLR | Tryptophan synthase beta chain 2 | 4.2.1.20 | 0.453 | |
| 5std | UNN | Scytalone dehydratase | 4.2.1.94 | 0.453 | |
| 1a72 | PAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.452 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.452 | |
| 1soj | IBM | cGMP-inhibited 3',5'-cyclic phosphodiesterase B | 3.1.4.17 | 0.452 | |
| 1xdk | REA | Retinoic acid receptor beta | / | 0.452 | |
| 2flh | ZEA | Cytokinin-specific binding protein | / | 0.452 | |
| 2giv | ACO | Histone acetyltransferase KAT8 | / | 0.452 | |
| 2woa | 023 | Macrophage metalloelastase | 3.4.24.65 | 0.452 | |
| 2zev | B71 | Geranylgeranyl pyrophosphate synthase | / | 0.452 | |
| 3hdh | NAD | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.452 | |
| 3l9l | L9L | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.452 | |
| 3l9n | L9N | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.452 | |
| 3tky | N7I | (Iso)eugenol O-methyltransferase | 2.1.1.146 | 0.452 | |
| 3zbr | NAP | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.452 | |
| 4hbg | NDP | 3-oxoacyl-[acyl-carrier-protein] reductase | 1.1.1.100 | 0.452 | |
| 4isk | 1JY | Thymidylate synthase | / | 0.452 | |
| 4j0v | 1H7 | Beta-secretase 1 | 3.4.23.46 | 0.452 | |
| 4ldk | FAD | FAD-linked sulfhydryl oxidase ALR | 1.8.3.2 | 0.452 | |
| 4n1g | CEI | Obelin | / | 0.452 | |
| 5kf1 | ACO | Predicted acetyltransferase | / | 0.452 | |
| 1cjw | COT | Serotonin N-acetyltransferase | / | 0.451 | |
| 1sd1 | FMC | S-methyl-5'-thioadenosine phosphorylase | / | 0.451 | |
| 3g1o | RF1 | HTH-type transcriptional regulator EthR | / | 0.451 | |
| 3oia | A31 | Camphor 5-monooxygenase | 1.14.15.1 | 0.451 | |
| 3t19 | 5MA | Gag-Pol polyprotein | 2.7.7.49 | 0.451 | |
| 3zky | WT4 | Isopenicillin N synthase | 1.21.3.1 | 0.451 | |
| 4ceq | QCH | Integrase | / | 0.451 | |
| 4ja1 | NGH | Stromelysin-1 | 3.4.24.17 | 0.451 | |
| 5agy | GTB | Tau class glutathione S-transferase | / | 0.451 | |
| 5i4n | ATP | Tyrosine-protein kinase JAK2 | / | 0.451 | |
| 1ib0 | FAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.450 | |
| 1k8y | 13P | Tryptophan synthase alpha chain | / | 0.450 | |
| 1p0h | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.450 | |
| 1xag | NAD | 3-dehydroquinate synthase | / | 0.450 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.450 | |
| 2ddo | ATP | Pyridoxine/pyridoxal/pyridoxamine kinase | / | 0.450 | |
| 2hdh | NAD | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.450 | |
| 2j9l | ATP | H(+)/Cl(-) exchange transporter 5 | / | 0.450 | |
| 2ym2 | NAP | Phenylacetone monooxygenase | 1.14.13.92 | 0.450 | |
| 2zi5 | 3L1 | Deoxycytidine kinase | 2.7.1.74 | 0.450 | |
| 3cz7 | ACO | Histone acetyltransferase RTT109 | 2.3.1.48 | 0.450 | |
| 3ddw | 055 | Glycogen phosphorylase, liver form | 2.4.1.1 | 0.450 | |
| 3o73 | O73 | Ribosyldihydronicotinamide dehydrogenase [quinone] | / | 0.450 | |
| 4b13 | X25 | Glycylpeptide N-tetradecanoyltransferase | / | 0.450 | |
| 4eiy | ZMA | Adenosine receptor A2a | / | 0.450 | |
| 4jv8 | 1M1 | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta | / | 0.450 | |
| 4u9y | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.450 | |
| 4uxq | 0LI | Fibroblast growth factor receptor 4 | 2.7.10.1 | 0.450 | |
| 4xcv | NDP | Probable hydroxyacid dehydrogenase protein | / | 0.450 | |
| 4xrb | NDP | Possible bifunctional enzyme riboflavin biosynthesis protein RibD: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino)uracil reduc | / | 0.450 | |
| 1ai9 | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 1drb | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 2ag1 | TPP | Benzaldehyde lyase | / | 0.449 | |
| 2ejz | SAH | Diphthine synthase | / | 0.449 | |
| 3aw9 | NAD | NAD-dependent epimerase/dehydratase | / | 0.449 | |
| 3c3x | NAP | Eugenol synthase 1 | 1.1.1.318 | 0.449 | |
| 3hpq | AP5 | Adenylate kinase | / | 0.449 | |
| 3nhy | A7B | Ribosyldihydronicotinamide dehydrogenase [quinone] | / | 0.449 | |
| 3zbs | OVE | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.449 | |
| 4gll | NAD | UDP-glucuronic acid decarboxylase 1 | 4.1.1.35 | 0.449 | |
| 1cjv | FOK | Adenylate cyclase type 2 | / | 0.448 | |
| 1cjv | FOK | Adenylate cyclase type 5 | / | 0.448 | |
| 1fdw | EST | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.448 | |
| 1mj3 | HXC | Enoyl-CoA hydratase, mitochondrial | 4.2.1.17 | 0.448 | |
| 1t4v | 14A | Prothrombin | 3.4.21.5 | 0.448 | |
| 1tl7 | FOK | Adenylate cyclase type 2 | / | 0.448 | |
| 1tl7 | FOK | Adenylate cyclase type 5 | / | 0.448 | |
| 1tll | FAD | Nitric oxide synthase, brain | 1.14.13.39 | 0.448 | |
| 2e82 | IM3 | D-amino-acid oxidase | 1.4.3.3 | 0.448 | |
| 2fhn | BNI | Avidin-related protein 4/5 | / | 0.448 | |
| 2q1s | NAI | Putative nucleotide sugar epimerase/ dehydratase | / | 0.448 | |
| 2z6i | FMN | 2-nitropropane dioxygenase | / | 0.448 | |
| 2zba | ZBA | Trichothecene 3-O-acetyltransferase | / | 0.448 | |
| 3cgb | COA | Coenzyme A disulfide reductase | / | 0.448 | |
| 3ivc | FG4 | Pantothenate synthetase | 6.3.2.1 | 0.448 | |
| 4ees | FMN | Phototropin-2 | 2.7.11.1 | 0.448 | |
| 4ejm | NAP | Putative zinc-binding dehydrogenase | / | 0.448 | |
| 5il1 | SAM | N6-adenosine-methyltransferase 70 kDa subunit | / | 0.448 | |
| 1a4i | NDP | C-1-tetrahydrofolate synthase, cytoplasmic | 1.5.1.5 | 0.447 | |
| 1bwk | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.447 | |
| 1efp | FAD | Electron transfer flavoprotein subunit alpha | / | 0.447 | |
| 1mvs | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.447 | |
| 1pd9 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.447 | |
| 1qay | MEV | 3-hydroxy-3-methylglutaryl-coenzyme A reductase | 1.1.1.88 | 0.447 | |
| 2yoz | OVE | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.447 | |
| 3s3v | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.447 | |
| 4a81 | DXC | Major pollen allergen Bet v 1-A | / | 0.447 | |
| 4ag5 | ADP | Type IV secretory pathway VirB4 components-like protein | / | 0.447 | |
| 4j53 | 1J4 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.447 | |
| 4mfp | COA | Uncharacterized protein | / | 0.447 | |
| 4r1f | ADP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.447 | |
| 4xoo | FMN | Coenzyme F420:L-glutamate ligase | / | 0.447 | |
| 5djt | FMN | NPH1-2 | / | 0.447 | |
| 5xra | CLR | Cannabinoid receptor 1 | / | 0.447 | |
| 1njc | DCM | Thymidylate synthase | / | 0.446 | |
| 2aq7 | TL5 | 3-oxoacyl-[acyl-carrier-protein] synthase 1 | 2.3.1.41 | 0.446 | |
| 2ed3 | SAH | Diphthine synthase | / | 0.446 | |
| 2yph | QQY | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.446 | |
| 3d0b | SNX | Heat shock protein HSP 90-alpha | / | 0.446 | |
| 3gyt | DL4 | Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily | / | 0.446 | |
| 3v0p | 4GW | Histo-blood group ABO system transferase | / | 0.446 | |
| 3vtd | TKD | Vitamin D3 receptor | / | 0.446 | |
| 4bva | T3 | Ketimine reductase mu-crystallin | 1.5.1.25 | 0.446 | |
| 4do3 | 0LA | Fatty-acid amide hydrolase 1 | 3.5.1.99 | 0.446 | |
| 4h0y | LAR | Actin, alpha skeletal muscle | / | 0.446 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.446 | |
| 4xvu | ATP | ATPase GET3 | / | 0.446 | |
| 1bdb | NAD | Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | / | 0.445 | |
| 1cbs | REA | Cellular retinoic acid-binding protein 2 | / | 0.445 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.445 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.445 | |
| 1fmj | RTL | Retinol dehydratase | / | 0.445 | |
| 1obn | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.445 | |
| 1rq1 | FAD | Endoplasmic oxidoreductin-1 | 1.8.4 | 0.445 | |
| 1yqz | COA | Coenzyme A disulfide reductase | / | 0.445 | |
| 2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.445 | |
| 2g97 | DGB | Nicotinamide phosphoribosyltransferase | 2.4.2.12 | 0.445 | |
| 2idk | C2F | Glycine N-methyltransferase | 2.1.1.20 | 0.445 | |
| 2p9c | NAI | D-3-phosphoglycerate dehydrogenase | 1.1.1.95 | 0.445 | |
| 2po7 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.445 | |
| 2xw7 | NDP | Dihydrofolate reductase | / | 0.445 | |
| 3d2m | COA | Amino-acid acetyltransferase | / | 0.445 | |
| 3d45 | GDP | Poly(A)-specific ribonuclease PARN | 3.1.13.4 | 0.445 | |
| 3hy7 | 097 | A disintegrin and metalloproteinase with thrombospondin motifs 5 | 3.4.24 | 0.445 | |
| 3mnr | SD1 | Heat shock protein HSP 90-alpha | / | 0.445 | |
| 3sf6 | FDA | Glutaryl-CoA dehydrogenase | / | 0.445 | |
| 3zxh | E41 | Collagenase 3 | 3.4.24 | 0.445 | |
| 4hle | 17V | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.445 | |
| 4hxy | NDP | Plm1 | / | 0.445 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.445 | |
| 4jtr | IBP | Aldo-keto reductase family 1 member C2 | / | 0.445 | |
| 5ans | RX8 | 7,8-dihydro-8-oxoguanine triphosphatase | 3.6.1.55 | 0.445 | |
| 1blz | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.444 | |
| 1fm9 | 9CR | Retinoic acid receptor RXR-alpha | / | 0.444 | |
| 1g7u | PEP | 2-dehydro-3-deoxyphosphooctonate aldolase | 2.5.1.55 | 0.444 | |
| 1pzh | NAD | Lactate dehydrogenase | / | 0.444 | |
| 1q0r | AKT | Aclacinomycin methylesterase RdmC | 3.1.1.95 | 0.444 | |
| 1rx8 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.444 | |
| 1uy8 | PU5 | Heat shock protein HSP 90-alpha | / | 0.444 | |
| 2gj3 | FAD | Nitrogen fixation regulatory protein | 2.7.13.3 | 0.444 | |
| 2oo7 | AP5 | Adenylate kinase | / | 0.444 | |
| 2owv | SAH | Diphthine synthase | / | 0.444 | |
| 2yjx | YJX | Heat shock protein HSP 90-alpha | / | 0.444 | |
| 2ylw | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.444 | |
| 3f88 | 3HT | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.444 | |
| 3nhj | A2Z | Ribosyldihydronicotinamide dehydrogenase [quinone] | / | 0.444 | |
| 3pd4 | A3G | Threonine--tRNA ligase | 6.1.1.3 | 0.444 | |
| 3rw9 | DSH | Spermidine synthase | 2.5.1.16 | 0.444 | |
| 4fa3 | 0SL | Aldo-keto reductase family 1 member C3 | / | 0.444 | |
| 4ge4 | 0KE | Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial | 2.6.1.39 | 0.444 | |
| 4h6r | FDA | Proline dehydrogenase | / | 0.444 | |
| 4mxe | ACO | N-acetyltransferase ESCO1 | 2.3.1 | 0.444 | |
| 4nyw | 2O3 | CREB-binding protein | / | 0.444 | |
| 4wqm | FAD | Toluene-4-monooxygenase electron transfer component | 1.18.1.3 | 0.444 | |
| 4xfj | ANP | Argininosuccinate synthase | / | 0.444 | |
| 4xz3 | COA | Acyl-CoA synthetase (NDP forming) | / | 0.444 | |
| 1b2l | NDC | Alcohol dehydrogenase | 1.1.1.1 | 0.443 | |
| 1dcy | I3N | Phospholipase A2, membrane associated | / | 0.443 | |
| 1f17 | NAI | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.443 | |
| 1k27 | MTM | S-methyl-5'-thioadenosine phosphorylase | / | 0.443 | |
| 1pq9 | 44B | Oxysterols receptor LXR-beta | / | 0.443 | |
| 1s7g | NAD | NAD-dependent protein deacylase 2 | / | 0.443 | |
| 1wwk | NAD | 307aa long hypothetical phosphoglycerate dehydrogenase | / | 0.443 | |
| 2a8s | GTP | U8 snoRNA-decapping enzyme | / | 0.443 | |
| 2fxu | BID | Actin, alpha skeletal muscle | / | 0.443 | |
| 2q5q | TPW | Indole-3-pyruvate decarboxylase | 4.1.1.74 | 0.443 | |
| 2rh9 | IGP | Tryptophan synthase alpha chain | / | 0.443 | |
| 3b9l | AZZ | Serum albumin | / | 0.443 | |
| 3bw2 | FMN | Putative 2-nitropropane dioxygenase | / | 0.443 | |
| 3fu8 | 3DM | Laccase-1 | 1.10.3.2 | 0.443 | |
| 3gag | FMN | Putative NADH dehydrogenase NAD(P)H nitroreductase | / | 0.443 | |
| 3gob | HXX | DdmC | / | 0.443 | |
| 3hav | ATP | Aminoglycoside phosphotransferase | / | 0.443 | |
| 3oaf | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 3orf | NAD | Dihydropteridine reductase | 1.5.1.34 | 0.443 | |
| 3pxy | JWS | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.443 | |
| 3upk | UD1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | / | 0.443 | |
| 3vi7 | CBD | Hematopoietic prostaglandin D synthase | / | 0.443 | |
| 4a2b | AGS | Cell division protein FtsA | / | 0.443 | |
| 4cfb | OM3 | Integrase | / | 0.443 | |
| 4da7 | AC2 | Purine nucleoside phosphorylase DeoD-type | 2.4.2.1 | 0.443 | |
| 4dbs | 0HV | Aldo-keto reductase family 1 member C3 | / | 0.443 | |
| 4kko | 1RE | Gag-Pol polyprotein | 2.7.7.49 | 0.443 | |
| 4nu0 | AP5 | Adenylate kinase | / | 0.443 | |
| 4uug | PXG | Branched-chain amino acid aminotransferase, putative | / | 0.443 | |
| 4zqc | F6F | Tryptophan synthase alpha chain | / | 0.443 | |
| 5b1y | NDP | 3-oxoacyl-[acyl-carrier-protein] reductase | / | 0.443 | |
| 5cb3 | APR | O-acetyl-ADP-ribose deacetylase | / | 0.443 | |
| 5hgc | HCY | Uncharacterized protein | / | 0.443 | |
| 5kf2 | ACO | Predicted acetyltransferase | / | 0.443 | |
| 1piw | NAP | NADP-dependent alcohol dehydrogenase 6 | 1.1.1.2 | 0.442 | |
| 1q41 | IXM | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.442 | |
| 1qyx | ASD | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.442 | |
| 1udt | VIA | cGMP-specific 3',5'-cyclic phosphodiesterase | / | 0.442 | |
| 2p9g | NAI | D-3-phosphoglycerate dehydrogenase | 1.1.1.95 | 0.442 | |
| 2v1a | FMN | NPH1-1 | / | 0.442 | |
| 2yac | 937 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.442 | |
| 2ydd | 2AM | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.442 | |
| 3anm | SYD | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1.1.1.267 | 0.442 | |
| 3djf | BC3 | Purine nucleoside phosphorylase | / | 0.442 | |
| 3jsi | WTC | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.442 | |
| 3znp | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.442 | |
| 4a0z | MLC | Transcription factor FapR | / | 0.442 | |
| 4bft | ZVT | Pantothenate kinase | 2.7.1.33 | 0.442 | |
| 4hy6 | FJ1 | Heat shock protein HSP 90-alpha | / | 0.442 | |
| 4kwh | NAP | Reductase homolog | / | 0.442 | |
| 4w5k | PLP | Aspartate aminotransferase, mitochondrial | / | 0.442 | |
| 1diu | BDM | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 1sg0 | STL | Ribosyldihydronicotinamide dehydrogenase [quinone] | / | 0.441 | |
| 1tdu | DUR | Thymidylate synthase | / | 0.441 | |
| 1tys | DHF | Thymidylate synthase | / | 0.441 | |
| 1uhl | MEI | Retinoic acid receptor RXR-beta | / | 0.441 | |
| 2bt4 | CA2 | 3-dehydroquinate dehydratase | 4.2.1.10 | 0.441 | |
| 2bxm | IMN | Serum albumin | / | 0.441 | |
| 2e0n | SAH | Precorrin-2 C20-methyltransferase | / | 0.441 | |
| 2fto | TMP | Thymidylate synthase | / | 0.441 | |
| 2g2h | P16 | Tyrosine-protein kinase ABL1 | 2.7.10.2 | 0.441 | |
| 2ozr | GG1 | Collagenase 3 | 3.4.24 | 0.441 | |
| 2vd0 | D27 | Hematopoietic prostaglandin D synthase | / | 0.441 | |
| 2wge | TLM | 3-oxoacyl-[acyl-carrier-protein] synthase 1 | 2.3.1.41 | 0.441 | |
| 2x7g | PVB | SRSF protein kinase 2 | 2.7.11.1 | 0.441 | |
| 3akz | GSU | Glutamate--tRNA ligase 2 | / | 0.441 | |
| 3bnk | FMN | Flavoredoxin | / | 0.441 | |
| 3g51 | ANP | Ribosomal protein S6 kinase alpha-3 | 2.7.11.1 | 0.441 | |
| 3pce | 3HP | Protocatechuate 3,4-dioxygenase alpha chain | 1.13.11.3 | 0.441 | |
| 3pce | 3HP | Protocatechuate 3,4-dioxygenase beta chain | 1.13.11.3 | 0.441 | |
| 3q9z | TXQ | Casein kinase II subunit alpha | 2.7.11.1 | 0.441 | |
| 3qwc | 98P | Prothrombin | 3.4.21.5 | 0.441 | |
| 4bbh | YBN | Glycylpeptide N-tetradecanoyltransferase | / | 0.441 | |
| 4bcq | TJF | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.441 | |
| 4h80 | 04T | Aldehyde dehydrogenase, dimeric NADP-preferring | / | 0.441 | |
| 4s34 | ANP | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.441 | |
| 4y9l | FAD | Acyl-CoA dehydrogenase family member 11 | / | 0.441 | |
| 5c3a | URM | Histo-blood group ABO system transferase | / | 0.441 | |
| 5jla | NAD | Putative short-chain dehydrogenase/reductase | / | 0.441 | |
| 1fdu | EST | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.440 | |
| 1kvs | UPG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.440 | |
| 1tow | CRZ | Fatty acid-binding protein, adipocyte | / | 0.440 | |
| 1uyc | PU7 | Heat shock protein HSP 90-alpha | / | 0.440 | |
| 1z7y | AA5 | Cysteine synthase 1 | 2.5.1.47 | 0.440 | |
| 2c29 | NAP | Dihydroflavonol 4-reductase | / | 0.440 | |
| 2ed5 | SAH | Diphthine synthase | / | 0.440 | |
| 2nnl | ERD | Dihydroflavonol 4-reductase | 1.1.1.219 | 0.440 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.440 | |
| 2ydo | ADN | Adenosine receptor A2a | / | 0.440 | |
| 2yke | YKE | Heat shock protein HSP 90-alpha | / | 0.440 | |
| 2z2d | HSI | Macrophage metalloelastase | 3.4.24.65 | 0.440 | |
| 3r4b | 74T | Gag-Pol polyprotein | / | 0.440 | |
| 3rsr | N5P | Ribonucleoside-diphosphate reductase large chain 1 | 1.17.4.1 | 0.440 | |
| 3tqh | NDP | Quinone oxidoreductase | / | 0.440 | |
| 3up3 | XCA | aceDAF-12 | / | 0.440 | |
| 3zqt | TES | Androgen receptor | / | 0.440 | |
| 4cj3 | E4F | Integrase | / | 0.440 | |
| 4eqw | COA | Coenzyme A disulfide reductase | / | 0.440 | |
| 4lsa | BLD | Protein BRASSINOSTEROID INSENSITIVE 1 | 2.7.10.1 | 0.440 | |
| 4mfe | BTN | Pyruvate carboxylase | / | 0.440 | |
| 4nbt | NAD | 3-oxoacyl-[acyl-carrier-protein] reductase | / | 0.440 | |
| 4ovi | N01 | Phenylacetone monooxygenase | 1.14.13.92 | 0.440 | |
| 4q72 | FAD | Bifunctional protein PutA | / | 0.440 | |
| 4ytn | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.440 | |
| 5idw | NAP | Short-chain dehydrogenase/reductase SDR | / | 0.440 | |
| 5iu8 | 6DZ | Adenosine receptor A2a | / | 0.440 |