1.500 Å
X-ray
2001-10-26
Name: | Tryptophan synthase alpha chain |
---|---|
ID: | TRPA_SALTY |
AC: | P00929 |
Organism: | Salmonella typhimurium |
Reign: | Bacteria |
TaxID: | 99287 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 23.448 |
---|---|
Number of residues: | 21 |
Including | |
Standard Amino Acids: | 19 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.445 | 722.250 |
% Hydrophobic | % Polar |
---|---|
52.34 | 47.66 |
According to VolSite |
HET Code: | 13P |
---|---|
Formula: | C3H5O6P |
Molecular weight: | 168.042 g/mol |
DrugBank ID: | DB04326 |
Buried Surface Area: | 60.34 % |
Polar Surface area: | 119.53 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 1 |
Rings: | 0 |
Aromatic rings: | 0 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
48.3937 | 28.8456 | 11.8063 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C3 | CG | PHE- 22 | 3.8 | 0 | Hydrophobic |
C2 | CD1 | ILE- 64 | 4.22 | 0 | Hydrophobic |
C3 | CD2 | LEU- 100 | 3.64 | 0 | Hydrophobic |
O3 | OH | TYR- 175 | 2.79 | 150.36 | H-Bond (Protein Donor) |
O1P | N | GLY- 213 | 2.67 | 175.08 | H-Bond (Protein Donor) |
C1 | CG2 | ILE- 232 | 4.33 | 0 | Hydrophobic |
O3P | N | GLY- 234 | 2.89 | 164.11 | H-Bond (Protein Donor) |
O2P | N | SER- 235 | 2.74 | 144.99 | H-Bond (Protein Donor) |
O2P | OG | SER- 235 | 2.56 | 154.63 | H-Bond (Protein Donor) |
O3P | N | SER- 235 | 3.35 | 139.23 | H-Bond (Protein Donor) |
O3P | O | HOH- 739 | 2.61 | 169.98 | H-Bond (Protein Donor) |
O3P | O | HOH- 764 | 2.58 | 179.97 | H-Bond (Protein Donor) |