2.300 Å
X-ray
2005-08-17
| Name: | 3-oxoacyl-[acyl-carrier-protein] synthase 1 |
|---|---|
| ID: | FABB_ECOLI |
| AC: | P0A953 |
| Organism: | Escherichia coli |
| Reign: | Bacteria |
| TaxID: | 83333 |
| EC Number: | 2.3.1.41 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 97 % |
| B | 3 % |
| B-Factor: | 23.570 |
|---|---|
| Number of residues: | 35 |
| Including | |
| Standard Amino Acids: | 30 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 5 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.346 | 502.875 |
| % Hydrophobic | % Polar |
|---|---|
| 53.69 | 46.31 |
| According to VolSite | |

| HET Code: | TL5 |
|---|---|
| Formula: | C12H15O2S |
| Molecular weight: | 223.311 g/mol |
| DrugBank ID: | DB08627 |
| Buried Surface Area: | 76.64 % |
| Polar Surface area: | 65.42 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 3 |
| H-Bond Donors: | 0 |
| Rings: | 1 |
| Aromatic rings: | 0 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 25.1486 | 90.1045 | 0.603267 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C9 | CD2 | PHE- 229 | 3.32 | 0 | Hydrophobic |
| C10 | CG | PRO- 272 | 4.02 | 0 | Hydrophobic |
| C11 | CB | PRO- 272 | 3.87 | 0 | Hydrophobic |
| C9 | CB | THR- 300 | 4.08 | 0 | Hydrophobic |
| C9 | CG2 | THR- 302 | 3.99 | 0 | Hydrophobic |
| O1 | NE2 | HIS- 333 | 2.82 | 141.82 | H-Bond (Protein Donor) |
| C11 | CB | PHE- 390 | 3.93 | 0 | Hydrophobic |
| C9 | CE1 | PHE- 392 | 4.28 | 0 | Hydrophobic |
| C4 | CE1 | PHE- 392 | 4.13 | 0 | Hydrophobic |