sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 5i39 | FAD | L-amino acid deaminase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 5i39 | FAD | L-amino acid deaminase | / | 1.588 | |
| 5hxw | FAD | L-amino acid deaminase | / | 1.341 | |
| 4ysh | FAD | Glycine oxidase | / | 0.965 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.947 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.938 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.928 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.911 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.907 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.883 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.861 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.852 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.849 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.848 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.848 | |
| 2rgh | FAD | Alpha-Glycerophosphate Oxidase | / | 0.848 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.846 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.844 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.843 | |
| 3znp | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.837 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.836 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.828 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.804 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.801 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.797 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.793 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.789 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.786 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.786 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.777 | |
| 2rgo | FAD | Alpha-Glycerophosphate Oxidase | / | 0.774 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.774 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.770 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.768 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.768 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.764 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.762 | |
| 4tm4 | FDA | KtzI | / | 0.761 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.760 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.760 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.760 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.759 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.757 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.754 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.751 | |
| 3if9 | FAD | Glycine oxidase | 1.4.3.19 | 0.751 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.750 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.749 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.749 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.747 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.743 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.742 | |
| 4yxd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.741 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.740 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.739 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.738 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.736 | |
| 1ve9 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.735 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.735 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.735 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.734 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.733 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.732 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.732 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.729 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.728 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.723 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.723 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.723 | |
| 3aeb | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.722 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.721 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.718 | |
| 3sfd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.717 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.716 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.716 | |
| 3bgi | SAH | Thiopurine S-methyltransferase | 2.1.1.67 | 0.715 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.715 | |
| 1knp | FAD | L-aspartate oxidase | 1.4.3.16 | 0.714 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.714 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.714 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.714 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.713 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.713 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.712 | |
| 4tlz | FAD | KtzI | / | 0.711 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.710 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.710 | |
| 4jn9 | FAD | DepH | / | 0.710 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.709 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.709 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.709 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.708 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.708 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.707 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.707 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.706 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.706 | |
| 1knr | FAD | L-aspartate oxidase | 1.4.3.16 | 0.705 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.704 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.704 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.702 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.701 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.701 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.700 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.700 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.699 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.697 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.697 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.696 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.695 | |
| 2cdu | FAD | NADH oxidase | / | 0.695 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.694 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.694 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.693 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.693 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.693 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.693 | |
| 2aqj | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.691 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.691 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.691 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.691 | |
| 5a89 | FMN | Riboflavin biosynthesis protein RibF | 2.7.1.26 | 0.691 | |
| 3kkj | FAD | Renalase | / | 0.690 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.690 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.690 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.690 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.690 | |
| 1jki | NAI | Inositol-3-phosphate synthase | 5.5.1.4 | 0.689 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.689 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.688 | |
| 4iv8 | SAM | Phosphoethanolamine N-methyltransferase,putative | / | 0.688 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.688 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.687 | |
| 2e48 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.687 | |
| 2pr5 | FMN | Blue-light photoreceptor | / | 0.687 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.687 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.687 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.687 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.687 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.687 | |
| 5a8a | FMN | Riboflavin biosynthesis protein RibF | 2.7.1.26 | 0.687 | |
| 3u81 | SAH | Catechol O-methyltransferase | 2.1.1.6 | 0.686 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.686 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.686 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.685 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.685 | |
| 3w5u | FAD | Ferredoxin | / | 0.685 | |
| 4z44 | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.685 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.684 | |
| 3sfe | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.684 | |
| 1h51 | FMN | Pentaerythritol tetranitrate reductase | / | 0.683 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.682 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.682 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.682 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.681 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.681 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.681 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.681 | |
| 2fzm | FAD | Bifunctional protein PutA | 1.5.5.2 | 0.680 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.680 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.679 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.679 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.679 | |
| 2vyn | NAD | Glyceraldehyde-3-phosphate dehydrogenase A | / | 0.679 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.679 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.679 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.679 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.678 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.678 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.678 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.678 | |
| 4ycp | FMN | tRNA-dihydrouridine(16) synthase | / | 0.678 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.677 | |
| 3awi | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 1.5 | 0.677 | |
| 3gg0 | FMN | Uncharacterized protein | / | 0.677 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.677 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.676 | |
| 3gg1 | FMN | Uncharacterized protein | / | 0.676 | |
| 2isk | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.675 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.675 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.675 | |
| 5djt | FMN | NPH1-2 | / | 0.675 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.674 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.674 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.674 | |
| 3gwd | FAD | Cyclohexanone monooxygenase | / | 0.674 | |
| 3qj4 | FAD | Renalase | / | 0.674 | |
| 2v3a | FAD | Rubredoxin-NAD(+) reductase | 1.18.1.1 | 0.673 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.673 | |
| 3gmb | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.673 | |
| 3grv | ADN | Probable ribosomal RNA small subunit methyltransferase A | / | 0.673 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.673 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.673 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.673 | |
| 4af6 | FAD | Ferredoxin--NADP reductase, leaf isozyme, chloroplastic | 1.18.1.2 | 0.673 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.673 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.673 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.673 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.672 | |
| 1x0p | FAD | Tll0078 protein | / | 0.672 | |
| 2ard | FDA | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.672 | |
| 2bab | FAD | Putative aminooxidase | / | 0.672 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.671 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.671 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.671 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.671 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.671 | |
| 1qaq | SFG | rRNA adenine N-6-methyltransferase | 2.1.1.184 | 0.670 | |
| 1vhn | FMN | tRNA-dihydrouridine synthase | / | 0.670 | |
| 2e0i | FAD | DNA photolyase | / | 0.670 | |
| 1cqx | FAD | Flavohemoprotein | / | 0.669 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.669 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.669 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.669 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.669 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.668 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.668 | |
| 4rnv | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.668 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.667 | |
| 1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.667 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.667 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.666 | |
| 4ytn | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.666 | |
| 1h6v | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.665 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.665 | |
| 2iyi | FMN | AppA, antirepressor of ppsR, sensor of blue light | / | 0.665 | |
| 3gfx | FMN | Uncharacterized protein | / | 0.665 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.665 | |
| 2pg0 | FAD | Acyl-CoA dehydrogenase | / | 0.664 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.664 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.664 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.664 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.664 | |
| 1w34 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.663 | |
| 4hj4 | FMN | LOV protein | / | 0.663 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.662 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.662 | |
| 1l3i | SAH | Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) | / | 0.662 | |
| 1rz1 | FAD | Phenol 2-hydroxylase component B | / | 0.662 | |
| 1yrx | FMN | AppA protein | / | 0.662 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.662 | |
| 3da1 | FAD | Glycerol-3-phosphate dehydrogenase | / | 0.662 | |
| 3p82 | FMN | Pentaerythritol tetranitrate reductase | / | 0.662 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.662 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.661 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.661 | |
| 4tm3 | FAD | KtzI | / | 0.661 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.660 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.660 | |
| 2a1t | FAD | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.7 | 0.660 | |
| 2ar8 | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.660 | |
| 2dvl | FAD | Acyl-CoA dehydrogenase | / | 0.660 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.660 | |
| 2q3r | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.660 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.660 | |
| 3is2 | FAD | Vivid PAS protein VVD | / | 0.660 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.660 | |
| 3ukk | FDA | UDP-galactopyranose mutase | / | 0.660 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.660 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.660 | |
| 5ccb | SAH | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A | 2.1.1.220 | 0.660 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.659 | |
| 1y56 | ATP | Uncharacterized protein | / | 0.658 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.658 | |
| 4cw5 | FMN | DfnA | / | 0.658 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.658 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.658 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.658 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.657 | |
| 1y9d | FAD | Pyruvate oxidase | 1.2.3.3 | 0.657 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.657 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.657 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.657 | |
| 4wuj | FMN | Glycoside hydrolase family 15, cellulose signaling associated protein envoy | / | 0.657 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.656 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.656 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.656 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.656 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.655 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.655 | |
| 2o06 | MTA | Spermidine synthase | 2.5.1.16 | 0.655 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.655 | |
| 4em3 | FAD | Coenzyme A disulfide reductase | / | 0.655 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.654 | |
| 3fbs | FAD | Oxidoreductase | / | 0.654 | |
| 3nmu | SAM | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase | / | 0.654 | |
| 1kqb | FMN | Oxygen-insensitive NAD(P)H nitroreductase | / | 0.653 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.653 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.653 | |
| 2gj3 | FAD | Nitrogen fixation regulatory protein | 2.7.13.3 | 0.653 | |
| 3d72 | FAD | Vivid PAS protein VVD | / | 0.653 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.653 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.653 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.653 | |
| 4h4q | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.653 | |
| 1jqi | FAD | Short-chain specific acyl-CoA dehydrogenase, mitochondrial | / | 0.652 | |
| 3hj9 | FMN | Uncharacterized protein | / | 0.652 | |
| 4irn | FAD | AnaB | / | 0.652 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.652 | |
| 1n9l | FMN | Putative blue light receptor | / | 0.651 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.651 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.651 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.651 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.651 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.651 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.650 | |
| 1npt | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.650 | |
| 2vyq | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.650 | |
| 3djl | FAD | Putative acyl-CoA dehydrogenase AidB | 1.3.99 | 0.650 | |
| 3ept | FDA | Putative FAD-monooxygenase | / | 0.650 | |
| 3gwz | SAH | Mitomycin biosynthesis 6-O-methyltransferase | / | 0.650 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.650 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.650 | |
| 4ykf | NAI | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.650 |