sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1yzq | GNP | Ras-related protein Rab-6A |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1yzq | GNP | Ras-related protein Rab-6A | / | 1.280 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 1.228 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 1.216 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 1.180 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 1.173 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 1.170 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 1.152 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 1.150 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 1.129 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 1.124 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 1.118 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 1.107 | |
| 4dlz | GNP | GTPase HRas | / | 1.105 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 1.092 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 1.083 | |
| 3oiw | GNP | GTPase HRas | / | 1.081 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 1.077 | |
| 4dlx | GNP | GTPase HRas | / | 1.075 | |
| 4dlv | GNP | GTPase HRas | / | 1.072 | |
| 2c5l | GTP | GTPase HRas | / | 1.070 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 1.070 | |
| 3i3s | GNP | GTPase HRas | / | 1.069 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 1.069 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 1.068 | |
| 3rs4 | GNP | GTPase HRas | / | 1.068 | |
| 3rsl | GNP | GTPase HRas | / | 1.067 | |
| 4dsn | GCP | GTPase KRas | / | 1.067 | |
| 3rs7 | GNP | GTPase HRas | / | 1.064 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 1.061 | |
| 3oes | GNP | GTPase RhebL1 | / | 1.059 | |
| 3rs5 | GNP | GTPase HRas | / | 1.057 | |
| 3v4f | GNP | GTPase HRas | / | 1.056 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 1.056 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 1.055 | |
| 3l8y | GNP | GTPase HRas | / | 1.054 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.054 | |
| 3rs0 | GNP | GTPase HRas | / | 1.053 | |
| 3k8y | GNP | GTPase HRas | / | 1.050 | |
| 4nyj | GNP | GTPase HRas | / | 1.049 | |
| 4dls | GNP | GTPase HRas | / | 1.048 | |
| 5b2z | GNP | GTPase HRas | / | 1.047 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 1.046 | |
| 3ddc | GNP | GTPase HRas | / | 1.046 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 1.046 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 1.044 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 1.041 | |
| 4l9w | GNP | GTPase HRas | / | 1.040 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.039 | |
| 2rgc | GNP | GTPase HRas | / | 1.037 | |
| 3oiv | GNP | GTPase HRas | / | 1.031 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 1.026 | |
| 3oiu | GNP | GTPase HRas | / | 1.025 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 1.022 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 1.021 | |
| 4dlw | GNP | GTPase HRas | / | 1.021 | |
| 2rge | GNP | GTPase HRas | / | 1.020 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 1.020 | |
| 3lbh | GNP | GTPase HRas | / | 1.017 | |
| 4dso | GSP | GTPase KRas | / | 1.017 | |
| 4xoi | GTP | Transforming protein RhoA | / | 1.017 | |
| 4nyi | GNP | GTPase HRas | / | 1.016 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 1.015 | |
| 1kmq | GNP | Transforming protein RhoA | / | 1.014 | |
| 3lbi | GNP | GTPase HRas | / | 1.007 | |
| 4dlt | GNP | GTPase HRas | / | 1.006 | |
| 4g0n | GNP | GTPase HRas | / | 1.005 | |
| 2rgb | GNP | GTPase HRas | / | 1.004 | |
| 3lbn | GNP | GTPase HRas | / | 1.003 | |
| 4xvq | GNP | GTPase HRas | / | 1.002 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.999 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.999 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.998 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 0.995 | |
| 4k81 | GTP | GTPase HRas | / | 0.993 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.992 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.990 | |
| 3tgp | GNP | GTPase HRas | / | 0.989 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.988 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 0.986 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.981 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.981 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.980 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.977 | |
| 2rgg | GNP | GTPase HRas | / | 0.975 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.971 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.970 | |
| 4dvg | GSP | Rho family GTPase | / | 0.969 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.966 | |
| 3k9l | GNP | GTPase HRas | / | 0.961 | |
| 4dsu | GDP | GTPase KRas | / | 0.961 | |
| 3kud | GDP | GTPase HRas | / | 0.959 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.956 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.956 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.952 | |
| 4mit | GTP | Rho-related protein racC | / | 0.952 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.951 | |
| 2cl6 | CAG | GTPase HRas | / | 0.949 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.949 | |
| 4wa7 | GDP | GTPase KRas | / | 0.949 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.947 | |
| 4xsg | GSP | Transforming protein RhoA | / | 0.946 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.945 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.941 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.941 | |
| 2ce2 | GDP | GTPase HRas | / | 0.940 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.938 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.938 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.936 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.933 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.933 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.932 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.930 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.930 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.929 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.928 | |
| 4q02 | GDP | GTPase KRas | / | 0.927 | |
| 4epw | GDP | GTPase KRas | / | 0.926 | |
| 4lv6 | GDP | GTPase KRas | / | 0.925 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.924 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.924 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.921 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.919 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.918 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.914 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.913 | |
| 4q03 | GDP | GTPase KRas | / | 0.912 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.911 | |
| 4l9s | GDP | GTPase HRas | / | 0.910 | |
| 4ql3 | GDP | GTPase KRas | / | 0.909 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.906 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.904 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.902 | |
| 1lfd | GNP | GTPase HRas | / | 0.901 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.901 | |
| 4epx | GDP | GTPase KRas | / | 0.901 | |
| 4tq9 | GDP | GTPase KRas | / | 0.897 | |
| 3ref | GDP | Rho family GTPase | / | 0.896 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.895 | |
| 4l8g | GDP | GTPase KRas | / | 0.895 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.894 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.893 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.893 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.892 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.888 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.886 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.885 | |
| 3r9x | GNP | GTPase Era | / | 0.883 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.883 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.882 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.881 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.880 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.878 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.878 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.878 | |
| 3ftq | GNP | Septin-2 | / | 0.878 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.875 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.875 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.874 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.872 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.870 | |
| 4luc | GDP | GTPase KRas | / | 0.869 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.866 | |
| 4xvr | GNP | GTPase HRas | / | 0.866 | |
| 4lpk | GDP | GTPase KRas | / | 0.865 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.864 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.861 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.859 | |
| 4ldj | GDP | GTPase KRas | / | 0.859 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.855 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.854 | |
| 4db1 | ANP | Myosin-7 | / | 0.853 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.852 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.849 | |
| 3zfd | ANP | Chromosome-associated kinesin KIF4 | / | 0.845 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.845 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.843 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.842 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.837 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.836 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.836 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.836 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.835 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.834 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.831 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.827 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.827 | |
| 1fmw | ATP | Myosin-2 heavy chain | / | 0.825 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.824 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.820 | |
| 4lrw | GDP | GTPase KRas | / | 0.818 | |
| 4obe | GDP | GTPase KRas | / | 0.818 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.817 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.816 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.814 | |
| 2w2v | GTP | Ras-related C3 botulinum toxin substrate 2 | / | 0.813 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.812 | |
| 1yhn | GTP | Ras-related protein Rab-7a | / | 0.812 | |
| 4tl6 | ANP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.811 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.810 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.810 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.809 | |
| 4tl7 | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.809 | |
| 1ayl | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.808 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.807 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.807 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.807 | |
| 3m0e | ATP | Transcriptional regulator (NtrC family) | / | 0.802 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.801 | |
| 2zet | GTP | Ras-related protein Rab-27B | / | 0.799 | |
| 4c2u | ANP | DNA helicase | / | 0.799 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.797 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.795 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.794 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.793 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.790 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.790 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.790 | |
| 5l3s | GNP | Signal recognition particle receptor FtsY | / | 0.790 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.789 | |
| 3a4l | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.789 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.789 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.788 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.787 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.784 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.784 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.783 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.782 | |
| 4cid | ANP | EH domain-containing protein 2 | / | 0.782 | |
| 5k5z | ANP | Uncharacterized protein | / | 0.779 | |
| 4asu | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.777 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.776 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.776 | |
| 3nbz | GTP | GTP-binding nuclear protein Ran | / | 0.775 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.775 | |
| 1wbb | ADP | DNA mismatch repair protein MutS | / | 0.774 | |
| 4idp | GNP | Atlastin-1 | 3.6.5 | 0.774 | |
| 4yqf | GDP | Septin-9 | / | 0.774 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.773 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.773 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.772 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.771 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.770 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.770 | |
| 3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.770 | |
| 4ncl | GDP | Eukaryotic translation initiation factor 5B | / | 0.770 | |
| 5cyo | GDP | Septin-9 | / | 0.770 | |
| 2fna | ADP | Uncharacterized protein | / | 0.769 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.769 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.769 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.768 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.768 | |
| 1aq2 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.767 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.767 | |
| 4tlb | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.767 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.766 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.765 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.765 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.765 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.759 | |
| 1gqy | ACP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.758 | |
| 2msc | GDP | MHC class I alpha chain | / | 0.756 | |
| 2olq | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.756 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.756 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.755 | |
| 1xms | ANP | Protein RecA | / | 0.754 | |
| 1a4r | GNH | Cell division control protein 42 homolog | / | 0.753 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.753 | |
| 4tl8 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.753 | |
| 4v02 | ATP | Site-determining protein | / | 0.752 | |
| 1os1 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.751 | |
| 4xvu | ATP | ATPase GET3 | / | 0.751 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.750 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.749 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.749 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.749 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.749 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.748 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.748 | |
| 3zl8 | ADP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.747 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.746 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.745 | |
| 2zts | ADP | Uncharacterized protein | / | 0.742 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.742 | |
| 4x8l | AP5 | Adenylate kinase | / | 0.741 | |
| 3ieu | GDP | GTPase Era | / | 0.740 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.740 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.739 | |
| 1ank | ANP | Adenylate kinase | / | 0.738 | |
| 2db3 | ANP | ATP-dependent RNA helicase vasa, isoform A | 3.6.4.13 | 0.737 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.737 | |
| 3tlx | ADP | Adenylate kinase 2 | / | 0.736 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.735 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.735 | |
| 3c41 | ANP | Amino acid ABC transporter | / | 0.733 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.730 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.730 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.730 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.730 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.730 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.727 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.726 | |
| 3q9l | ATP | Septum site-determining protein MinD | / | 0.726 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.726 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.725 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.724 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.723 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.723 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.723 | |
| 3moh | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.722 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.722 | |
| 4r9u | ANP | Vitamin B12 import ATP-binding protein BtuD | / | 0.722 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.722 | |
| 1xef | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.721 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.721 | |
| 4bec | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.721 | |
| 2j7p | GNP | Signal recognition particle protein | / | 0.720 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 0.720 | |
| 3i5x | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.720 | |
| 3r9i | ADP | Septum site-determining protein MinD | / | 0.720 | |
| 3sqw | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.720 | |
| 4cei | ANP | ATP-dependent helicase/deoxyribonuclease subunit B | 3.1 | 0.720 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.719 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.719 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.718 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.718 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.717 | |
| 4ki0 | ANP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.715 | |
| 1e1q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.714 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.714 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.714 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.713 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.713 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.713 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.713 | |
| 4ap0 | ADP | Kinesin-like protein KIF11 | / | 0.712 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.711 | |
| 2bbw | GP5 | Adenylate kinase 4, mitochondrial | / | 0.711 | |
| 3cob | ADP | Kinesin heavy chain-like protein | / | 0.711 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.710 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.710 | |
| 3c15 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.710 | |
| 1svw | GTP | Probable GTP-binding protein EngB | / | 0.709 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.709 | |
| 4oi4 | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.708 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.707 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.705 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.705 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.704 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.703 | |
| 2fgk | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.703 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.703 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.703 | |
| 4jld | ADP | Adenylate kinase | / | 0.703 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.702 | |
| 2x19 | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.702 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.702 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.701 | |
| 4c30 | ANP | DNA helicase | / | 0.701 | |
| 1w5s | ADP | ORC1-type DNA replication protein 2 | / | 0.700 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.700 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.700 | |
| 1z6t | ADP | Apoptotic protease-activating factor 1 | / | 0.699 | |
| 1i4l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.697 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.697 | |
| 1njf | AGS | DNA polymerase III subunit tau | 2.7.7.7 | 0.697 | |
| 1y3a | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.697 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.696 | |
| 1l8q | ADP | Chromosomal replication initiator protein DnaA | / | 0.695 | |
| 1e1q | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.694 | |
| 1e1q | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.694 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.692 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.692 | |
| 5bn3 | ADP | NEQ263 | / | 0.692 | |
| 1ohh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.691 | |
| 1ohh | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.691 | |
| 1g6o | ADP | Cag alpha | / | 0.690 | |
| 4ww0 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.690 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.688 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.687 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.687 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.687 | |
| 1svm | ATP | Large T antigen | 3.6.4 | 0.687 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.687 | |
| 4tlc | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.687 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.687 | |
| 2jj1 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.686 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.685 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.685 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.684 | |
| 2uyi | ADP | Kinesin-like protein KIF11 | / | 0.683 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.683 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.682 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.682 | |
| 2c96 | ATP | Psp operon transcriptional activator | / | 0.681 | |
| 4ko8 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.681 | |
| 5l3r | GCP | Cell division protein FtsY homolog, chloroplastic | / | 0.681 | |
| 4yer | ADP | Antibiotic ABC transporter, ATP-binding protein, putative | / | 0.679 | |
| 2zpa | ADP | tRNA(Met) cytidine acetyltransferase TmcA | / | 0.678 | |
| 1e0j | ANP | DNA primase/helicase | 2.7.7 | 0.677 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.677 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.677 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.677 | |
| 2fgj | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.676 | |
| 2c9c | ATP | Psp operon transcriptional activator | / | 0.675 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.674 | |
| 1ht2 | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.673 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.673 | |
| 3hu1 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.672 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.672 | |
| 5dac | AGS | Uncharacterized protein | / | 0.670 | |
| 2zr9 | DTP | Protein RecA | / | 0.669 | |
| 4jl5 | ADP | Adenylate kinase | / | 0.669 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.669 | |
| 4zir | ANP | Energy-coupling factor transporter ATP-binding protein EcfA2 | 3.6.3 | 0.669 | |
| 4zir | ANP | Energy-coupling factor transporter ATP-binding protein EcfA1 | / | 0.669 | |
| 1nly | AGS | Cag alpha | / | 0.668 | |
| 3qcz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.668 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.668 | |
| 4e2w | JHZ | Methyltransferase | / | 0.668 | |
| 2o8b | ADP | DNA mismatch repair protein Msh2 | / | 0.667 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.667 | |
| 4gyi | ADP | Uncharacterized protein | / | 0.667 | |
| 2zro | ADP | Protein RecA | / | 0.666 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.665 | |
| 4e32 | DWN | Methyltransferase | / | 0.665 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.663 | |
| 2zfi | ADP | Kinesin-like protein KIF1A | / | 0.663 | |
| 4q73 | FAD | Bifunctional protein PutA | / | 0.662 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.661 | |
| 3jvv | ACP | Twitching mobility protein | / | 0.661 | |
| 4a51 | ADP | Kinesin-like protein KIF11 | / | 0.661 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.660 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.660 | |
| 3k1j | ADP | ATP-dependent protease Lon | / | 0.660 | |
| 1k6m | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 | 2.7.1.105 | 0.659 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.658 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.658 | |
| 3ndj | JHZ | Methyltransferase | / | 0.658 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.658 | |
| 1mab | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.657 | |
| 3uk6 | ADP | RuvB-like 2 | 3.6.4.12 | 0.657 | |
| 3zid | GDP | Tubulin-like protein CetZ | / | 0.657 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.657 | |
| 5cyp | GSP | Septin-9 | / | 0.657 | |
| 2ad5 | ADP | CTP synthase | / | 0.656 | |
| 4iok | ADP | Formate--tetrahydrofolate ligase | / | 0.656 | |
| 4tnq | TTP | Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 | 3.1.5 | 0.656 | |
| 1ii6 | ADP | Kinesin-like protein KIF11 | / | 0.655 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.655 | |
| 4h1v | GNP | Dynamin-1-like protein | 3.6.5.5 | 0.655 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.654 | |
| 3sop | GDP | Neuronal-specific septin-3 | / | 0.652 | |
| 4n49 | MGT | Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 | 2.1.1.57 | 0.652 | |
| 2bif | ANP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.651 | |
| 2g1q | ADP | Kinesin-like protein KIF11 | / | 0.651 | |
| 5fsi | 8DG | 7,8-dihydro-8-oxoguanine triphosphatase | 3.6.1.55 | 0.651 | |
| 5la6 | GTP | Tubulin alpha-1B chain | / | 0.651 | |
| 2xae | ADP | Kinesin-like protein KIF11 | / | 0.650 | |
| 4ymu | ATP | ABC-type polar amino acid transport system, ATPase component | / | 0.650 |