sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2rgc | GNP | GTPase HRas |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2rgc | GNP | GTPase HRas | / | 1.256 | |
| 4dlx | GNP | GTPase HRas | / | 1.250 | |
| 4dlz | GNP | GTPase HRas | / | 1.250 | |
| 4dlt | GNP | GTPase HRas | / | 1.218 | |
| 4dlv | GNP | GTPase HRas | / | 1.218 | |
| 3rs4 | GNP | GTPase HRas | / | 1.216 | |
| 3rs5 | GNP | GTPase HRas | / | 1.216 | |
| 3rs7 | GNP | GTPase HRas | / | 1.216 | |
| 3rs0 | GNP | GTPase HRas | / | 1.198 | |
| 3l8y | GNP | GTPase HRas | / | 1.196 | |
| 3lbn | GNP | GTPase HRas | / | 1.196 | |
| 3rsl | GNP | GTPase HRas | / | 1.196 | |
| 4l9w | GNP | GTPase HRas | / | 1.196 | |
| 3i3s | GNP | GTPase HRas | / | 1.194 | |
| 3k8y | GNP | GTPase HRas | / | 1.193 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 1.183 | |
| 3oiu | GNP | GTPase HRas | / | 1.183 | |
| 3v4f | GNP | GTPase HRas | / | 1.183 | |
| 5b2z | GNP | GTPase HRas | / | 1.182 | |
| 3oiv | GNP | GTPase HRas | / | 1.181 | |
| 4dlw | GNP | GTPase HRas | / | 1.181 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 1.181 | |
| 3oiw | GNP | GTPase HRas | / | 1.176 | |
| 2rgb | GNP | GTPase HRas | / | 1.169 | |
| 3lbi | GNP | GTPase HRas | / | 1.169 | |
| 3lbh | GNP | GTPase HRas | / | 1.166 | |
| 2rge | GNP | GTPase HRas | / | 1.163 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 1.160 | |
| 4dls | GNP | GTPase HRas | / | 1.160 | |
| 2c5l | GTP | GTPase HRas | / | 1.159 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 1.158 | |
| 3ddc | GNP | GTPase HRas | / | 1.145 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 1.145 | |
| 4nyj | GNP | GTPase HRas | / | 1.144 | |
| 4dsn | GCP | GTPase KRas | / | 1.133 | |
| 3k9l | GNP | GTPase HRas | / | 1.126 | |
| 4g0n | GNP | GTPase HRas | / | 1.119 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 1.118 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 1.117 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 1.110 | |
| 4k81 | GTP | GTPase HRas | / | 1.103 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 1.102 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 1.089 | |
| 4dso | GSP | GTPase KRas | / | 1.089 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 1.084 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 1.073 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 1.073 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.063 | |
| 4nyi | GNP | GTPase HRas | / | 1.063 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 1.060 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 1.042 | |
| 4xvq | GNP | GTPase HRas | / | 1.042 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 1.039 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 1.037 | |
| 2rgg | GNP | GTPase HRas | / | 1.033 | |
| 1kmq | GNP | Transforming protein RhoA | / | 1.031 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 1.031 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 1.028 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.028 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 1.027 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 1.024 | |
| 3tgp | GNP | GTPase HRas | / | 1.024 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.023 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 1.023 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 1.016 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 1.014 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 1.007 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 1.004 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 1.001 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 1.001 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 1.001 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 1.000 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.999 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 0.998 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.998 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 0.998 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.992 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.991 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.990 | |
| 3kud | GDP | GTPase HRas | / | 0.984 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.980 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.978 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.977 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 0.976 | |
| 2ce2 | GDP | GTPase HRas | / | 0.970 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.968 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.968 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.967 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.966 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.964 | |
| 4wa7 | GDP | GTPase KRas | / | 0.964 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.962 | |
| 4ql3 | GDP | GTPase KRas | / | 0.962 | |
| 4epx | GDP | GTPase KRas | / | 0.958 | |
| 3r9x | GNP | GTPase Era | / | 0.957 | |
| 4l9s | GDP | GTPase HRas | / | 0.948 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.947 | |
| 2cl6 | CAG | GTPase HRas | / | 0.947 | |
| 4tq9 | GDP | GTPase KRas | / | 0.947 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.946 | |
| 4dvg | GSP | Rho family GTPase | / | 0.946 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.937 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.937 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.936 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.934 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.933 | |
| 4mit | GTP | Rho-related protein racC | / | 0.931 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.931 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.930 | |
| 4q02 | GDP | GTPase KRas | / | 0.927 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.926 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.926 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.924 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.922 | |
| 4xsg | GSP | Transforming protein RhoA | / | 0.922 | |
| 1lfd | GNP | GTPase HRas | / | 0.921 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.921 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.920 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.920 | |
| 4l8g | GDP | GTPase KRas | / | 0.919 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.919 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.918 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.918 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.915 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.915 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.913 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.912 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.912 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.912 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.910 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.910 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.909 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.905 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.905 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.902 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.902 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.901 | |
| 4xvr | GNP | GTPase HRas | / | 0.901 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.900 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.897 | |
| 4epw | GDP | GTPase KRas | / | 0.896 | |
| 4dsu | GDP | GTPase KRas | / | 0.895 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.894 | |
| 4ldj | GDP | GTPase KRas | / | 0.894 | |
| 4lv6 | GDP | GTPase KRas | / | 0.891 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.890 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.890 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.889 | |
| 4q03 | GDP | GTPase KRas | / | 0.889 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.887 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.884 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.883 | |
| 4obe | GDP | GTPase KRas | / | 0.879 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.878 | |
| 4lpk | GDP | GTPase KRas | / | 0.875 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.870 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.868 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.867 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.866 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.865 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.863 | |
| 3zfd | ANP | Chromosome-associated kinesin KIF4 | / | 0.863 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.861 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.860 | |
| 3ref | GDP | Rho family GTPase | / | 0.860 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.859 | |
| 3ftq | GNP | Septin-2 | / | 0.858 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.856 | |
| 1fmw | ATP | Myosin-2 heavy chain | / | 0.855 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 0.848 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.848 | |
| 4luc | GDP | GTPase KRas | / | 0.846 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.845 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.844 | |
| 4lrw | GDP | GTPase KRas | / | 0.843 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.839 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.838 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.837 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.835 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.835 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.835 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.834 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.833 | |
| 5l3r | GCP | Cell division protein FtsY homolog, chloroplastic | / | 0.829 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.827 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.826 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.825 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.825 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.823 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.823 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.822 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.822 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.821 | |
| 2j7p | GNP | Signal recognition particle protein | / | 0.820 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 0.820 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.819 | |
| 5l3s | GNP | Signal recognition particle receptor FtsY | / | 0.818 | |
| 1f5n | GNP | Guanylate-binding protein 1 | / | 0.816 | |
| 4ncl | GDP | Eukaryotic translation initiation factor 5B | / | 0.813 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.807 | |
| 2olq | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.805 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.805 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.804 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.801 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.798 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.797 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.797 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.796 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.796 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.796 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.795 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.794 | |
| 4idp | GNP | Atlastin-1 | 3.6.5 | 0.794 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.792 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.791 | |
| 4tl6 | ANP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.790 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.789 | |
| 4db1 | ANP | Myosin-7 | / | 0.789 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.787 | |
| 3a4l | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.787 | |
| 4c2u | ANP | DNA helicase | / | 0.787 | |
| 2jlr | ANP | Genome polyprotein | 3.4.21.91 | 0.785 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.784 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.784 | |
| 3sqw | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.783 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.783 | |
| 3i5x | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.782 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.782 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.782 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.778 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.778 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.777 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.776 | |
| 1ank | ANP | Adenylate kinase | / | 0.773 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.773 | |
| 3nbz | GTP | GTP-binding nuclear protein Ran | / | 0.773 | |
| 4xjx | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.773 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.770 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.769 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.769 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.768 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.768 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.768 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.768 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.768 | |
| 2msc | GDP | MHC class I alpha chain | / | 0.768 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.768 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.768 | |
| 2dwp | ACP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.767 | |
| 2w2v | GTP | Ras-related C3 botulinum toxin substrate 2 | / | 0.767 | |
| 3c15 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.767 | |
| 4cei | ANP | ATP-dependent helicase/deoxyribonuclease subunit B | 3.1 | 0.767 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.767 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.765 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.765 | |
| 3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.764 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.764 | |
| 5bn3 | ADP | NEQ263 | / | 0.764 | |
| 1a4r | GNH | Cell division control protein 42 homolog | / | 0.763 | |
| 1ayl | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.763 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.763 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.760 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.760 | |
| 2zet | GTP | Ras-related protein Rab-27B | / | 0.760 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.758 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.758 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.756 | |
| 2fna | ADP | Uncharacterized protein | / | 0.755 | |
| 2xae | ADP | Kinesin-like protein KIF11 | / | 0.755 | |
| 1khe | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.753 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.752 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.751 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.751 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.751 | |
| 2db3 | ANP | ATP-dependent RNA helicase vasa, isoform A | 3.6.4.13 | 0.751 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.751 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.751 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.750 | |
| 4yqf | GDP | Septin-9 | / | 0.750 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.748 | |
| 4cid | ANP | EH domain-containing protein 2 | / | 0.748 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.748 | |
| 4r9u | ANP | Vitamin B12 import ATP-binding protein BtuD | / | 0.747 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.746 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.745 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.745 | |
| 5cyo | GDP | Septin-9 | / | 0.743 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.742 | |
| 1esn | ANP | Pantothenate kinase | 2.7.1.33 | 0.741 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.741 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.741 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.740 | |
| 1xms | ANP | Protein RecA | / | 0.739 | |
| 4ap0 | ADP | Kinesin-like protein KIF11 | / | 0.739 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.738 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.738 | |
| 1gqy | ACP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.737 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.737 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.737 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.736 | |
| 1wbb | ADP | DNA mismatch repair protein MutS | / | 0.735 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.735 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.734 | |
| 4b7b | ADP | Kinesin-like protein KIF11 | / | 0.733 | |
| 1e1q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.732 | |
| 4ki0 | ANP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.730 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.729 | |
| 4tlc | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.728 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.727 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.727 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.726 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.726 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.725 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.725 | |
| 5k5z | ANP | Uncharacterized protein | / | 0.725 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.724 | |
| 2zts | ADP | Uncharacterized protein | / | 0.724 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.723 | |
| 3r9i | ADP | Septum site-determining protein MinD | / | 0.723 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.723 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.721 | |
| 4jld | ADP | Adenylate kinase | / | 0.721 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.720 | |
| 4xvu | ATP | ATPase GET3 | / | 0.720 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.719 | |
| 2vor | ACP | Folylpolyglutamate synthase | / | 0.719 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.719 | |
| 3cob | ADP | Kinesin heavy chain-like protein | / | 0.719 | |
| 3moh | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.719 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.718 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.717 | |
| 3fmo | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.717 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.717 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.717 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.716 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.715 | |
| 1yhn | GTP | Ras-related protein Rab-7a | / | 0.715 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.715 | |
| 4jl5 | ADP | Adenylate kinase | / | 0.715 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.714 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.714 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.713 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.713 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.712 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.712 | |
| 1ii6 | ADP | Kinesin-like protein KIF11 | / | 0.710 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.710 | |
| 4ko8 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.710 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.710 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.709 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.709 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.709 | |
| 4gzm | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.709 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.709 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.709 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.708 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.708 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.707 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.707 | |
| 1nly | AGS | Cag alpha | / | 0.706 | |
| 2c9c | ATP | Psp operon transcriptional activator | / | 0.706 | |
| 2r9v | ATP | ATP synthase subunit alpha | / | 0.706 | |
| 1aq2 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.705 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.705 | |
| 1svw | GTP | Probable GTP-binding protein EngB | / | 0.704 | |
| 3qcz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.704 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.703 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.702 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.702 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.702 | |
| 3hpr | AP5 | Adenylate kinase | / | 0.702 | |
| 1in5 | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.701 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.701 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.700 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.700 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.700 | |
| 2zfi | ADP | Kinesin-like protein KIF1A | / | 0.700 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.700 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.699 | |
| 1os1 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.698 | |
| 2c96 | ATP | Psp operon transcriptional activator | / | 0.698 | |
| 3q9l | ATP | Septum site-determining protein MinD | / | 0.697 | |
| 2jj1 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.695 | |
| 4c30 | ANP | DNA helicase | / | 0.695 | |
| 3kji | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.694 | |
| 4oi4 | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.694 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.691 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.691 | |
| 2gks | ADP | Probable bifunctional SAT/APS kinase | 2.7.1.25 | 0.691 | |
| 2vf7 | ADP | UvrABC system protein A | / | 0.691 | |
| 4iok | ADP | Formate--tetrahydrofolate ligase | / | 0.691 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.690 | |
| 4hut | ATP | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 2.5.1.17 | 0.690 | |
| 1svm | ATP | Large T antigen | 3.6.4 | 0.689 | |
| 3pyz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.689 | |
| 1z6t | ADP | Apoptotic protease-activating factor 1 | / | 0.687 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.687 | |
| 4pl0 | ANP | Microcin-J25 export ATP-binding/permease protein McjD | / | 0.687 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.686 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.686 | |
| 3jvv | ACP | Twitching mobility protein | / | 0.686 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.686 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.685 | |
| 1oe0 | TTP | Deoxynucleoside kinase | / | 0.684 | |
| 3k1j | ADP | ATP-dependent protease Lon | / | 0.684 | |
| 1xnj | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | 2.7.1.25 | 0.683 | |
| 1i4l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.682 | |
| 1xef | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.682 | |
| 2x19 | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.682 | |
| 4h1v | GNP | Dynamin-1-like protein | 3.6.5.5 | 0.681 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.680 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.680 | |
| 1bif | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.679 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.679 | |
| 3tif | ADP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.679 | |
| 2zrj | AGS | Protein RecA | / | 0.673 | |
| 3ieu | GDP | GTPase Era | / | 0.673 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.672 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.672 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.672 | |
| 1r0z | ATP | Cystic fibrosis transmembrane conductance regulator | / | 0.671 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.670 | |
| 2fgj | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.669 | |
| 1ny5 | ADP | Transcriptional regulator (NtrC family) | / | 0.668 | |
| 2bbw | GP5 | Adenylate kinase 4, mitochondrial | / | 0.668 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.668 | |
| 2zr9 | DTP | Protein RecA | / | 0.667 | |
| 4ike | ADP | Adenylate kinase | / | 0.667 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.666 | |
| 4tla | ADP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.666 | |
| 1ofh | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.665 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.664 | |
| 3hu1 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.664 | |
| 2q2y | ADP | Kinesin-like protein KIF11 | / | 0.663 | |
| 2x7e | ADP | Kinesin-like protein KIF11 | / | 0.663 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.663 | |
| 4ag5 | ADP | Type IV secretory pathway VirB4 components-like protein | / | 0.662 | |
| 1ake | AP5 | Adenylate kinase | / | 0.661 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.661 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.661 | |
| 1w5s | ADP | ORC1-type DNA replication protein 2 | / | 0.658 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.658 | |
| 2g1q | ADP | Kinesin-like protein KIF11 | / | 0.658 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.657 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.657 | |
| 3m0e | ATP | Transcriptional regulator (NtrC family) | / | 0.657 | |
| 4jlo | ADP | Adenylate kinase | / | 0.656 | |
| 1nsf | ATP | Vesicle-fusing ATPase | 3.6.4.6 | 0.654 | |
| 2zpa | ADP | tRNA(Met) cytidine acetyltransferase TmcA | / | 0.654 | |
| 3pfi | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.654 | |
| 1y3a | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.652 | |
| 2bif | ANP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.651 | |
| 4iij | GTP | Tubulin alpha-1B chain | / | 0.651 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.650 | |
| 2uz3 | TTP | Thymidine kinase | / | 0.650 | |
| 4hse | ADP | Chaperone protein ClpB | / | 0.650 | |
| 4ohw | ATP | Protein clpf-1 | / | 0.650 |