Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2dw0 | GM6 | Zinc metalloproteinase-disintegrin-like VAP2B | 3.4.24 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 2dw0 | GM6 | Zinc metalloproteinase-disintegrin-like VAP2B | 3.4.24 | 1.000 | |
| 1mnc | PLH | Neutrophil collagenase | 3.4.24.34 | 0.535 | |
| 2oxw | ILE_ALA_GLY | Macrophage metalloelastase | 3.4.24.65 | 0.535 | |
| 4gr8 | R4C | Macrophage metalloelastase | 3.4.24.65 | 0.535 | |
| 1dth | BAT | Snake venom metalloproteinase atrolysin-D | 3.4.24.42 | 0.527 | |
| 1zvx | FIN | Neutrophil collagenase | 3.4.24.34 | 0.522 | |
| 3kek | 3EK | Collagenase 3 | 3.4.24 | 0.519 | |
| 2wo8 | 077 | Macrophage metalloelastase | 3.4.24.65 | 0.517 | |
| 2w13 | WR2 | Snake venom metalloproteinase BaP1 | 3.4.24 | 0.515 | |
| 1bzs | BSI | Neutrophil collagenase | 3.4.24.34 | 0.514 | |
| 2w14 | WR2 | Snake venom metalloproteinase BaP1 | 3.4.24 | 0.513 | |
| 3aig | 0ZC | Snake venom metalloproteinase adamalysin-2 | 3.4.24.46 | 0.509 | |
| 3tsk | QEG | Macrophage metalloelastase | 3.4.24.65 | 0.503 | |
| 4g9l | NGH | Stromelysin-1 | 3.4.24.17 | 0.503 | |
| 1atl | 0QI | Snake venom metalloproteinase atrolysin-D | 3.4.24.42 | 0.502 | |
| 2wo9 | 068 | Macrophage metalloelastase | 3.4.24.65 | 0.502 | |
| 3b8z | 294 | A disintegrin and metalloproteinase with thrombospondin motifs 5 | 3.4.24 | 0.502 | |
| 3ljg | EEF | Macrophage metalloelastase | 3.4.24.65 | 0.502 | |
| 2woa | 576 | Macrophage metalloelastase | 3.4.24.65 | 0.501 | |
| 3i7g | 732 | Collagenase 3 | 3.4.24 | 0.496 | |
| 1d7x | SPC | Stromelysin-1 | 3.4.24.17 | 0.495 | |
| 4guy | KLJ | Macrophage metalloelastase | 3.4.24.65 | 0.495 | |
| 3fwj | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.492 | |
| 1utt | CP8 | Macrophage metalloelastase | 3.4.24.65 | 0.489 | |
| 3fwg | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.489 | |
| 3hyg | 099 | A disintegrin and metalloproteinase with thrombospondin motifs 5 | 3.4.24 | 0.489 | |
| 1qrr | UPG | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.488 | |
| 3hy7 | 097 | A disintegrin and metalloproteinase with thrombospondin motifs 5 | 3.4.24 | 0.488 | |
| 1uyu | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.487 | |
| 3lik | EEG | Macrophage metalloelastase | 3.4.24.65 | 0.487 | |
| 4an4 | DUD | Putative glycosyl transferase | / | 0.487 | |
| 4l4e | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.487 | |
| 2jih | 097 | A disintegrin and metalloproteinase with thrombospondin motifs 1 | 3.4.24 | 0.485 | |
| 2ovx | 4MR | Matrix metalloproteinase-9 | 3.4.24.35 | 0.485 | |
| 1g05 | BBH | Stromelysin-1 | 3.4.24.17 | 0.484 | |
| 3k4y | IPE | Isopentenyl phosphate kinase | 2.7.4.26 | 0.484 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.482 | |
| 1hdo | NAP | Flavin reductase (NADPH) | / | 0.479 | |
| 2ow0 | 6MR | Matrix metalloproteinase-9 | 3.4.24.35 | 0.479 | |
| 3oho | Z79 | Stromelysin-1 | 3.4.24.17 | 0.479 | |
| 1biw | S80 | Stromelysin-1 | 3.4.24.17 | 0.478 | |
| 1iy8 | NAD | Levodione reductase | / | 0.478 | |
| 2ovz | 5MR | Matrix metalloproteinase-9 | 3.4.24.35 | 0.477 | |
| 3ddw | 055 | Glycogen phosphorylase, liver form | 2.4.1.1 | 0.477 | |
| 3g45 | 988 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.477 | |
| 1jk3 | BAT | Macrophage metalloelastase | 3.4.24.65 | 0.476 | |
| 3fwf | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.476 | |
| 3lxi | CAM | Cytochrome P450 | / | 0.476 | |
| 4gr0 | R4B | Macrophage metalloelastase | 3.4.24.65 | 0.476 | |
| 1rm8 | BAT | Matrix metalloproteinase-16 | 3.4.24 | 0.475 | |
| 2d1n | FA4 | Collagenase 3 | 3.4.24 | 0.475 | |
| 3lgp | 50X | Disintegrin and metalloproteinase domain-containing protein 17 | 3.4.24.86 | 0.475 | |
| 4g3r | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.475 | |
| 1hyg | NAP | L-2-hydroxycarboxylate dehydrogenase (NAD(P)(+)) | / | 0.474 | |
| 2j7p | GNP | Signal recognition particle protein | / | 0.474 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 0.474 | |
| 3l63 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.474 | |
| 3wrm | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.474 | |
| 4cp4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.473 | |
| 1gkc | NFH | Matrix metalloproteinase-9 | 3.4.24.35 | 0.472 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 0.472 | |
| 2oy2 | ILE_ALA_GLY | Neutrophil collagenase | 3.4.24.34 | 0.471 | |
| 2rlc | CHD | Choloylglycine hydrolase | 3.5.1.24 | 0.471 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.471 | |
| 2wo8 | 023 | Macrophage metalloelastase | 3.4.24.65 | 0.470 | |
| 1hv5 | RXP | Stromelysin-3 | 3.4.24 | 0.469 | |
| 1m75 | CAA | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.469 | |
| 3kkz | SAM | Uncharacterized protein | / | 0.469 | |
| 4l4b | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.469 | |
| 4q0k | GA3 | Phytohormone-binding protein | / | 0.469 | |
| 1dz8 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.468 | |
| 2ewm | NAD | (S)-1-Phenylethanol dehydrogenase | 1.1.1.311 | 0.468 | |
| 2i47 | KGY | Disintegrin and metalloproteinase domain-containing protein 17 | 3.4.24.86 | 0.468 | |
| 5ej6 | TD6 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase | / | 0.468 | |
| 3s79 | ASD | Aromatase | 1.14.14.14 | 0.467 | |
| 4gr3 | R45 | Macrophage metalloelastase | 3.4.24.65 | 0.467 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 0.466 | |
| 1vi2 | NAD | Quinate/shikimate dehydrogenase | / | 0.466 | |
| 4lht | CNL | 1,8-cineole 2-endo-monooxygenase | 1.14.13.156 | 0.466 | |
| 1dz4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.465 | |
| 3wrj | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.465 | |
| 4emt | C2E | Stimulator of interferon genes protein | / | 0.465 | |
| 1dhf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.464 | |
| 1mg5 | NAI | Alcohol dehydrogenase | 1.1.1.1 | 0.464 | |
| 2a1n | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.464 | |
| 3fhx | PLP | Pyridoxal kinase | 2.7.1.35 | 0.464 | |
| 3i6i | NDP | Putative leucoanthocyanidin reductase 1 | / | 0.464 | |
| 1yrc | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.463 | |
| 2hk9 | NAP | Shikimate dehydrogenase (NADP(+)) | / | 0.463 | |
| 4jc5 | 1K5 | Stimulator of interferon genes protein | / | 0.463 | |
| 1phh | FAD | p-hydroxybenzoate hydroxylase | / | 0.462 | |
| 2i47 | INN | Disintegrin and metalloproteinase domain-containing protein 17 | 3.4.24.86 | 0.462 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.462 | |
| 1bw9 | NAD | Phenylalanine dehydrogenase | / | 0.461 | |
| 1kvk | ATP | Mevalonate kinase | 2.7.1.36 | 0.461 | |
| 2feu | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.461 | |
| 2y60 | M8F | Isopenicillin N synthase | 1.21.3.1 | 0.461 | |
| 2zax | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.461 | |
| 4hxy | NDP | Plm1 | / | 0.461 | |
| 4tm4 | FDA | KtzI | / | 0.461 | |
| 1lrj | UD1 | UDP-glucose 4-epimerase | 5.1.3.2 | 0.460 | |
| 2npa | MMB | Peroxisome proliferator-activated receptor alpha | / | 0.460 | |
| 3zxh | E41 | Collagenase 3 | 3.4.24 | 0.460 | |
| 4dpe | NGH | Stromelysin-1 | 3.4.24.17 | 0.460 | |
| 1t88 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.459 | |
| 2a1m | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.459 | |
| 2ivi | ACW | Isopenicillin N synthase | 1.21.3.1 | 0.459 | |
| 3wrh | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.459 | |
| 4ejm | NAP | Putative zinc-binding dehydrogenase | / | 0.459 | |
| 1g1a | NAD | dTDP-glucose 4,6-dehydratase | / | 0.458 | |
| 1hb3 | SCV | Isopenicillin N synthase | 1.21.3.1 | 0.458 | |
| 3drc | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.458 | |
| 3l0t | INN | Disintegrin and metalloproteinase domain-containing protein 17 | 3.4.24.86 | 0.458 | |
| 3zoi | M2W | Isopenicillin N synthase | 1.21.3.1 | 0.458 | |
| 4bfv | ZVV | Pantothenate kinase | 2.7.1.33 | 0.458 | |
| 4l4a | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.458 | |
| 4l6g | CNL | 1,8-cineole 2-endo-monooxygenase | 1.14.13.156 | 0.458 | |
| 1me6 | IVS | Plasmepsin-2 | 3.4.23.39 | 0.457 | |
| 1xe6 | 5FP | Plasmepsin-2 | 3.4.23.39 | 0.457 | |
| 2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.457 | |
| 3dva | TPW | Pyruvate dehydrogenase E1 component subunit alpha | 1.2.4.1 | 0.457 | |
| 3dva | TPW | Pyruvate dehydrogenase E1 component subunit beta | 1.2.4.1 | 0.457 | |
| 4nbt | NAD | 3-oxoacyl-[acyl-carrier-protein] reductase | / | 0.457 | |
| 1sln | INH | Stromelysin-1 | 3.4.24.17 | 0.456 | |
| 2ble | 5GP | GMP reductase 1 | / | 0.456 | |
| 3vsx | R32 | Renin | 3.4.23.15 | 0.456 | |
| 4fn4 | NAD | Short chain dehydrogenase | / | 0.456 | |
| 4lol | 1YE | Stimulator of interferon genes protein | / | 0.456 | |
| 1hb1 | OCV | Isopenicillin N synthase | 1.21.3.1 | 0.455 | |
| 1i59 | ADP | Chemotaxis protein CheA | 2.7.13.3 | 0.455 | |
| 2fzn | FAD | Bifunctional protein PutA | 1.5.5.2 | 0.455 | |
| 2g1o | 2IG | Renin | 3.4.23.15 | 0.455 | |
| 4i6a | HMG | 3-hydroxy-3-methylglutaryl-coenzyme A reductase | 1.1.1.88 | 0.455 | |
| 1cg4 | IMO | Adenylosuccinate synthetase | / | 0.454 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.454 | |
| 4bb3 | KKA | Isopenicillin N synthase | 1.21.3.1 | 0.454 | |
| 5cp4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.454 | |
| 1geb | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.453 | |
| 2qo5 | CHD | Fatty acid-binding protein 10-A, liver basic | / | 0.453 | |
| 2w0d | CGS | Macrophage metalloelastase | 3.4.24.65 | 0.453 | |
| 3ljt | LA3 | A disintegrin and metalloproteinase with thrombospondin motifs 5 | 3.4.24 | 0.453 | |
| 4bv9 | NDP | Ketimine reductase mu-crystallin | 1.5.1.25 | 0.453 | |
| 4eph | 0RK | Carnitine O-palmitoyltransferase 2, mitochondrial | 2.3.1.21 | 0.453 | |
| 4l4f | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.453 | |
| 1pwu | GM6 | Lethal factor | 3.4.24.83 | 0.452 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.452 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.452 | |
| 2c29 | NAP | Dihydroflavonol 4-reductase | / | 0.452 | |
| 2cpp | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.452 | |
| 2g1r | 3IG | Renin | 3.4.23.15 | 0.452 | |
| 3zky | WT4 | Isopenicillin N synthase | 1.21.3.1 | 0.452 | |
| 4zj8 | SUV | Orexin receptor type 1 | / | 0.452 | |
| 1bxk | NAD | dTDP-glucose 4,6-dehydratase 2 | / | 0.451 | |
| 1i59 | ANP | Chemotaxis protein CheA | 2.7.13.3 | 0.451 | |
| 1iwi | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.451 | |
| 1juv | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 1nzd | UPG | DNA beta-glucosyltransferase | / | 0.451 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.451 | |
| 3c1o | NAP | Eugenol synthase | / | 0.451 | |
| 4rvn | COA | Phenylacetate-coenzyme A ligase | / | 0.451 | |
| 1noo | CAH | Camphor 5-monooxygenase | 1.14.15.1 | 0.450 | |
| 2srt | INH | Stromelysin-1 | 3.4.24.17 | 0.450 | |
| 3gbk | 2PQ | Peroxisome proliferator-activated receptor gamma | / | 0.450 | |
| 4oma | LCS | Methionine gamma-lyase | / | 0.450 | |
| 4ozt | P1A | Ecdysone receptor, putative | / | 0.450 | |
| 5dw5 | 0T1 | Succinyl-CoA:acetate CoA-transferase | / | 0.450 | |
| 1zxc | IH6 | Disintegrin and metalloproteinase domain-containing protein 17 | 3.4.24.86 | 0.449 | |
| 2c27 | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.449 | |
| 2v16 | C47 | Renin | 3.4.23.15 | 0.449 | |
| 3cpp | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.449 | |
| 3mje | NDP | AmphB | / | 0.449 | |
| 3n0h | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 5hbr | COA | Acyl-CoA synthetase (NDP forming) | / | 0.449 | |
| 2a1o | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.448 | |
| 2bu9 | HFV | Isopenicillin N synthase | 1.21.3.1 | 0.448 | |
| 2bwp | PLG | 5-aminolevulinate synthase | 2.3.1.37 | 0.448 | |
| 2gs7 | ANP | Epidermal growth factor receptor | 2.7.10.1 | 0.448 | |
| 2jb4 | A14 | Isopenicillin N synthase | 1.21.3.1 | 0.448 | |
| 2wyv | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.448 | |
| 2zaw | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.448 | |
| 3och | 2MX | Dihydrofolate reductase | 1.5.1.3 | 0.448 | |
| 4dpw | AGS | Mevalonate diphosphate decarboxylase | / | 0.448 | |
| 4ef8 | FMN | Dihydroorotate dehydrogenase (fumarate) | / | 0.448 | |
| 4k28 | NAD | Shikimate dehydrogenase family protein | / | 0.448 | |
| 4kla | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.448 | |
| 4l49 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.448 | |
| 1d8m | BBH | Stromelysin-1 | 3.4.24.17 | 0.447 | |
| 2vbd | V10 | Isopenicillin N synthase | 1.21.3.1 | 0.447 | |
| 3ixp | 834 | Ecdysone receptor | / | 0.447 | |
| 3qiz | QI2 | Botulinum neurotoxin type A | 3.4.24.69 | 0.447 | |
| 4i03 | L88 | Macrophage metalloelastase | 3.4.24.65 | 0.447 | |
| 1bk0 | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.446 | |
| 1dz6 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.446 | |
| 1h73 | ANP | Homoserine kinase | 2.7.1.39 | 0.446 | |
| 1i5c | ADP | Chemotaxis protein CheA | 2.7.13.3 | 0.446 | |
| 1jkx | 138 | Phosphoribosylglycinamide formyltransferase | / | 0.446 | |
| 2jlc | TPP | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase | / | 0.446 | |
| 2q1s | NAI | Putative nucleotide sugar epimerase/ dehydratase | / | 0.446 | |
| 3fwi | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.446 | |
| 3mzh | CMP | CRP-like cAMP-activated global transcriptional regulator | / | 0.446 | |
| 4dpy | 2P0 | Mevalonate diphosphate decarboxylase | / | 0.446 | |
| 5jla | NAD | Putative short-chain dehydrogenase/reductase | / | 0.446 | |
| 1pvg | ANP | DNA topoisomerase 2 | 5.99.1.3 | 0.445 | |
| 1uzw | CDH | Isopenicillin N synthase | 1.21.3.1 | 0.445 | |
| 1xl8 | 152 | Peroxisomal carnitine O-octanoyltransferase | 2.3.1.137 | 0.445 | |
| 1you | PFD | Collagenase 3 | 3.4.24 | 0.445 | |
| 2a94 | AP0 | L-lactate dehydrogenase | 1.1.1.27 | 0.445 | |
| 2gjn | FMN | Nitronate monooxygenase | 1.13.12.16 | 0.445 | |
| 2rew | REW | Peroxisome proliferator-activated receptor alpha | / | 0.445 | |
| 2xs3 | ALA_PHE_THR_SER | Karilysin | 3.4.24 | 0.445 | |
| 3v9v | 21L | Peroxisome proliferator-activated receptor gamma | / | 0.445 | |
| 4gah | 0ET | Acyl-coenzyme A thioesterase THEM4 | 3.1.2.2 | 0.445 | |
| 4imf | SI3 | N-acetylneuraminate lyase | / | 0.445 | |
| 5idw | NAP | Short-chain dehydrogenase/reductase SDR | / | 0.445 | |
| 1b14 | NAD | Alcohol dehydrogenase | 1.1.1.1 | 0.444 | |
| 1iwj | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.444 | |
| 1pq9 | 44B | Oxysterols receptor LXR-beta | / | 0.444 | |
| 2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.444 | |
| 2d1o | FA4 | Stromelysin-1 | 3.4.24.17 | 0.444 | |
| 3aw9 | NAD | NAD-dependent epimerase/dehydratase | / | 0.444 | |
| 3dhc | CYK | N-acyl homoserine lactonase AiiA | 3.1.1.81 | 0.444 | |
| 3m6p | BB2 | Peptide deformylase 1B, chloroplastic/mitochondrial | 3.5.1.88 | 0.444 | |
| 3ssn | MVI | Mycinamicin VI 2''-O-methyltransferase | / | 0.444 | |
| 3wag | TYD | Glycosyltransferase | / | 0.444 | |
| 3zu2 | NAI | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.444 | |
| 4c9p | CAM | Cytochrome P450 | / | 0.444 | |
| 4dbz | NDP | Putative ketoacyl reductase | 1.3.1 | 0.444 | |
| 4f9m | FCM | Peroxisome proliferator-activated receptor gamma | / | 0.444 | |
| 4fc7 | NAP | Peroxisomal 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.444 | |
| 4hlk | 431 | Tankyrase-2 | 2.4.2.30 | 0.444 | |
| 4l0o | PLP | Cystathionine gamma-synthase | 2.5.1.48 | 0.444 | |
| 5koi | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.444 | |
| 1cyd | NDP | Carbonyl reductase [NADPH] 2 | 1.1.1.184 | 0.443 | |
| 1gd1 | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.443 | |
| 1u7t | NAD | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.1.1.35 | 0.443 | |
| 2e0n | SAH | Precorrin-2 C20-methyltransferase | / | 0.443 | |
| 2hu2 | NAD | C-terminal binding protein 1 | / | 0.443 | |
| 2iko | 7IG | Renin | 3.4.23.15 | 0.443 | |
| 2jbs | FMN | p-hydroxyphenylacetate 3-hydroxylase, oxygenase component | / | 0.443 | |
| 3gbu | ATP | Uncharacterized sugar kinase PH1459 | 2.7.1 | 0.443 | |
| 3q8h | AO9 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | / | 0.443 | |
| 3uzw | NAP | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.443 | |
| 3v9y | 24L | Peroxisome proliferator-activated receptor gamma | / | 0.443 | |
| 4a8v | 2AN | Major pollen allergen Bet v 1-J | / | 0.443 | |
| 4anx | 534 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.443 | |
| 4biw | ANP | Sensor histidine kinase CpxA | / | 0.443 | |
| 4egb | NAD | dTDP-glucose 4,6-dehydratase | / | 0.443 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.443 | |
| 6cp4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.443 | |
| 1gqt | ACP | Ribokinase | / | 0.442 | |
| 2f3r | G5P | Guanylate kinase | 2.7.4.8 | 0.442 | |
| 2vcm | M11 | Isopenicillin N synthase | 1.21.3.1 | 0.442 | |
| 2ves | GVR | UDP-3-O-acyl-N-acetylglucosamine deacetylase | / | 0.442 | |
| 2w3b | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.442 | |
| 2z97 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.442 | |
| 3b4y | F42 | F420-dependent glucose-6-phosphate dehydrogenase | / | 0.442 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.442 | |
| 4a6n | FAD | TetX family tetracycline inactivation enzyme | / | 0.442 | |
| 4epl | JAI | Jasmonic acid-amido synthetase JAR1 | 6.3.2 | 0.442 | |
| 4j0v | 1H7 | Beta-secretase 1 | 3.4.23.46 | 0.442 | |
| 4kgk | GTP | Uncharacterized protein | / | 0.442 | |
| 4lxk | 1YT | Beta-secretase 1 | 3.4.23.46 | 0.442 | |
| 4wqm | FAD | Toluene-4-monooxygenase electron transfer component | 1.18.1.3 | 0.442 | |
| 1b8y | IN7 | Stromelysin-1 | 3.4.24.17 | 0.441 | |
| 1dyi | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 1hfq | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 1pjk | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.441 | |
| 1xdd | AAY | Integrin alpha-L | / | 0.441 | |
| 2ahc | VNL | Chorismate pyruvate-lyase | / | 0.441 | |
| 2i7p | ACO | Pantothenate kinase 3 | 2.7.1.33 | 0.441 | |
| 2ix5 | FAD | Acyl-coenzyme A oxidase 4, peroxisomal | 1.3.3.6 | 0.441 | |
| 2y0m | ACO | Histone acetyltransferase KAT8 | / | 0.441 | |
| 4xye | NAD | Formate dehydrogenase | / | 0.441 | |
| 5eg3 | ACP | Fibroblast growth factor receptor 2 | / | 0.441 | |
| 1bxd | ANP | Osmolarity sensor protein EnvZ | 2.7.13.3 | 0.440 | |
| 1mja | COA | Histone acetyltransferase ESA1 | / | 0.440 | |
| 1t2b | CNL | 1,8-cineole 2-endo-monooxygenase | 1.14.13.156 | 0.440 | |
| 1t86 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.440 | |
| 1w19 | T5P | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.440 | |
| 2aq7 | TL5 | 3-oxoacyl-[acyl-carrier-protein] synthase 1 | 2.3.1.41 | 0.440 | |
| 2b53 | D23 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 | |
| 2e4n | SAH | Diphthine synthase | / | 0.440 | |
| 2hck | QUE | Tyrosine-protein kinase HCK | 2.7.10.2 | 0.440 | |
| 2ozu | ACO | Histone acetyltransferase KAT6A | / | 0.440 | |
| 2zui | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.440 | |
| 3a4v | NAD | NDP-sugar epimerase | / | 0.440 | |
| 3cly | ACP | Fibroblast growth factor receptor 2 | / | 0.440 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.440 | |
| 3jpu | TY4 | Transcriptional activator protein LasR | / | 0.440 | |
| 3kjm | 245 | Cytokinin dehydrogenase 1 | 1.5.99.12 | 0.440 | |
| 3t3r | 9PL | Cytochrome P450 2A6 | 1.14.13 | 0.440 | |
| 4br0 | AU1 | Ectonucleoside triphosphate diphosphohydrolase 2 | / | 0.440 | |
| 4m9a | FDA | Acyl-CoA dehydrogenase | / | 0.440 | |
| 4nr4 | 2LK | CREB-binding protein | / | 0.440 | |
| 4nvk | 2NY | Peroxidase | / | 0.440 |