Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4a9i | P9I | Bromodomain-containing protein 2 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 4a9i | P9I | Bromodomain-containing protein 2 | / | 1.000 | |
| 4a9m | P9M | Bromodomain-containing protein 2 | / | 0.641 | |
| 4uyf | 73B | Bromodomain-containing protein 2 | / | 0.627 | |
| 4a9h | TVP | Bromodomain-containing protein 2 | / | 0.624 | |
| 2yek | EAM | Bromodomain-containing protein 2 | / | 0.601 | |
| 4o76 | 1M3 | Bromodomain-containing protein 4 | / | 0.591 | |
| 4a9e | 3PF | Bromodomain-containing protein 2 | / | 0.580 | |
| 4alh | A9P | Bromodomain-containing protein 2 | / | 0.568 | |
| 4c67 | L5S | Bromodomain-containing protein 4 | / | 0.563 | |
| 4a9n | A9N | Bromodomain-containing protein 2 | / | 0.542 | |
| 4flp | JQ1 | Bromodomain testis-specific protein | / | 0.537 | |
| 4o70 | 1QK | Bromodomain-containing protein 4 | / | 0.536 | |
| 4uyg | 73B | Bromodomain-containing protein 2 | / | 0.536 | |
| 4akn | S5B | Bromodomain-containing protein 2 | / | 0.532 | |
| 4py6 | R78 | Bromodomain protein, putative | / | 0.532 | |
| 4o71 | CPB | Bromodomain-containing protein 4 | / | 0.527 | |
| 2yel | WSH | Bromodomain-containing protein 4 | / | 0.525 | |
| 4a9o | A9O | Bromodomain-containing protein 2 | / | 0.523 | |
| 4hxs | 1A3 | Bromodomain-containing protein 4 | / | 0.522 | |
| 2ydw | WSH | Bromodomain-containing protein 2 | / | 0.519 | |
| 4mr6 | 1K0 | Bromodomain-containing protein 2 | / | 0.519 | |
| 4bw3 | 9BM | Bromodomain-containing protein 4 | / | 0.512 | |
| 4bw1 | S5B | Bromodomain-containing protein 4 | / | 0.511 | |
| 3aqa | BYH | Bromodomain-containing protein 2 | / | 0.510 | |
| 4j0s | 1H3 | Bromodomain-containing protein 4 | / | 0.503 | |
| 4j1p | 1K0 | Bromodomain-containing protein 2 | / | 0.503 | |
| 3zyu | 1GH | Bromodomain-containing protein 4 | / | 0.495 | |
| 4men | 25K | Bromodomain-containing protein 4 | / | 0.495 | |
| 4lr6 | 1XA | Bromodomain-containing protein 4 | / | 0.494 | |
| 5bt5 | 2LO | Bromodomain-containing protein 2 | / | 0.490 | |
| 4lyw | 21Q | Bromodomain-containing protein 4 | / | 0.488 | |
| 4nyv | 15E | CREB-binding protein | / | 0.488 | |
| 4j3i | 1K0 | Bromodomain-containing protein 4 | / | 0.487 | |
| 2yem | WSH | Bromodomain-containing protein 4 | / | 0.485 | |
| 4meq | 25O | Bromodomain-containing protein 4 | / | 0.485 | |
| 5ii2 | LU2 | Protein polybromo-1 | / | 0.484 | |
| 3b9l | AZZ | Serum albumin | / | 0.483 | |
| 1qbg | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.482 | |
| 2chx | 090 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.481 | |
| 4e96 | 0NS | Bromodomain-containing protein 4 | / | 0.481 | |
| 4mr5 | 1K0 | Bromodomain-containing protein 2 | / | 0.481 | |
| 4elb | 34S | Dihydrofolate reductase | / | 0.480 | |
| 4qzs | JQ1 | Bromodomain-containing protein 4 | / | 0.478 | |
| 3tk3 | CPZ | Cytochrome P450 2B4 | 1.14.14.1 | 0.477 | |
| 1bwl | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.476 | |
| 4mep | 24Y | Bromodomain-containing protein 4 | / | 0.476 | |
| 2vn0 | TDZ | Cytochrome P450 2C8 | / | 0.475 | |
| 3drc | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.475 | |
| 4a9l | P9L | Bromodomain-containing protein 4 | / | 0.475 | |
| 4hbw | 14Z | Bromodomain-containing protein 4 | / | 0.475 | |
| 4hxr | 1A4 | Bromodomain-containing protein 4 | / | 0.475 | |
| 4meo | 25V | Bromodomain-containing protein 4 | / | 0.475 | |
| 3irm | 1CY | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.474 | |
| 4e2b | FMN | Dehydrogenase | / | 0.474 | |
| 2w9s | TOP | Dihydrofolate reductase type 1 from Tn4003 | 1.5.1.3 | 0.473 | |
| 4anx | 534 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.473 | |
| 1fml | RTL | Retinol dehydratase | / | 0.470 | |
| 3hdh | NAD | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.470 | |
| 4hby | 13F | Bromodomain-containing protein 4 | / | 0.470 | |
| 1e90 | MYC | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.469 | |
| 4jib | 1L6 | cGMP-dependent 3',5'-cyclic phosphodiesterase | 3.1.4.17 | 0.469 | |
| 4o78 | SAV | Bromodomain-containing protein 4 | / | 0.469 | |
| 4bw4 | 9B6 | Bromodomain-containing protein 4 | / | 0.468 | |
| 4kz0 | 1UJ | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.468 | |
| 4nh8 | 2LC | Heat shock protein HSP 90-alpha | / | 0.468 | |
| 1ia3 | TQ5 | Dihydrofolate reductase | 1.5.1.3 | 0.467 | |
| 2hy8 | 1ST | Serine/threonine-protein kinase PAK 1 | 2.7.11.1 | 0.466 | |
| 3bgq | VX2 | Serine/threonine-protein kinase pim-1 | 2.7.11.1 | 0.466 | |
| 4l9k | EHF | Serum albumin | / | 0.466 | |
| 5ccc | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.466 | |
| 1h66 | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.465 | |
| 2po7 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.465 | |
| 3t14 | FAD | Sulfide-quinone reductase | / | 0.465 | |
| 4ezk | 0SD | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.465 | |
| 4f3i | 0S6 | Bromodomain-containing protein 4 | / | 0.465 | |
| 5eai | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.465 | |
| 4iui | 1GQ | Estrogen receptor | / | 0.464 | |
| 4jia | 1K3 | Tyrosine-protein kinase JAK2 | / | 0.464 | |
| 1l2j | ETC | Estrogen receptor beta | / | 0.463 | |
| 2zjw | REF | Casein kinase II subunit alpha | 2.7.11.1 | 0.463 | |
| 4gpj | 0Q1 | Bromodomain-containing protein 4 | / | 0.463 | |
| 2a4z | BYM | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.462 | |
| 2fr0 | NDP | 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2 | / | 0.462 | |
| 2ovh | AS0 | Progesterone receptor | / | 0.462 | |
| 3e5a | VX6 | Aurora kinase A | 2.7.11.1 | 0.462 | |
| 3ofm | 4B0 | Casein kinase II subunit alpha' | 2.7.11.1 | 0.462 | |
| 3slk | NDP | Polyketide synthase extender module 2 | / | 0.462 | |
| 4g1z | 0VP | Vitamin D3 receptor A | / | 0.462 | |
| 2cig | 1DG | Dihydrofolate reductase | 1.5.1.3 | 0.461 | |
| 3ddq | RRC | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.461 | |
| 3l8p | 0CE | Angiopoietin-1 receptor | 2.7.10.1 | 0.461 | |
| 3mdm | FJZ | Cholesterol 24-hydroxylase | / | 0.461 | |
| 3oaf | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.461 | |
| 4nr5 | 2LL | CREB-binding protein | / | 0.461 | |
| 3ibd | CPZ | Cytochrome P450 2B6 | 1.14.13 | 0.460 | |
| 4gk2 | L66 | Ephrin type-A receptor 3 | 2.7.10.1 | 0.460 | |
| 4gk4 | L90 | Ephrin type-A receptor 3 | 2.7.10.1 | 0.460 | |
| 4hxo | 1A6 | Bromodomain-containing protein 4 | / | 0.460 | |
| 2xik | J60 | Serine/threonine-protein kinase 25 | 2.7.11.1 | 0.459 | |
| 4cfl | 8DQ | Bromodomain-containing protein 4 | / | 0.459 | |
| 4l8u | 9AZ | Serum albumin | / | 0.459 | |
| 1uzw | CDH | Isopenicillin N synthase | 1.21.3.1 | 0.458 | |
| 3et7 | 349 | Protein-tyrosine kinase 2-beta | 2.7.10.2 | 0.458 | |
| 3nx4 | NAP | Putative oxidoreductase | / | 0.458 | |
| 4alg | 1GH | Bromodomain-containing protein 2 | / | 0.458 | |
| 4bcm | T7Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
| 4nr8 | 2LL | Bromodomain-containing protein 4 | / | 0.458 | |
| 5eyp | LOC | Tubulin beta chain | / | 0.458 | |
| 1uy6 | PU3 | Heat shock protein HSP 90-alpha | / | 0.457 | |
| 1uye | PU9 | Heat shock protein HSP 90-alpha | / | 0.457 | |
| 2chz | 093 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.457 | |
| 2z3u | CRR | Cytochrome P450 | / | 0.457 | |
| 1h69 | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.456 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.456 | |
| 3vt9 | YI4 | Vitamin D3 receptor | / | 0.456 | |
| 4elb | 34R | Dihydrofolate reductase | / | 0.456 | |
| 4nyw | 2O3 | CREB-binding protein | / | 0.456 | |
| 5a4k | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.456 | |
| 1dis | BDM | Dihydrofolate reductase | 1.5.1.3 | 0.455 | |
| 1uy7 | PU4 | Heat shock protein HSP 90-alpha | / | 0.455 | |
| 2y4g | TIR | TamL | / | 0.455 | |
| 2zba | ZBA | Trichothecene 3-O-acetyltransferase | / | 0.455 | |
| 3at4 | CCK | Casein kinase II subunit alpha | 2.7.11.1 | 0.455 | |
| 3hz5 | Z64 | Heat shock protein HSP 90-alpha | / | 0.455 | |
| 3svg | ODR | Bromodomain-containing protein 4 | / | 0.455 | |
| 3t2k | FAD | Sulfide-quinone reductase | / | 0.455 | |
| 4bw2 | UTH | Bromodomain-containing protein 4 | / | 0.455 | |
| 4dij | BLF | E3 ubiquitin-protein ligase Mdm2 | 6.3.2 | 0.455 | |
| 1dr3 | HBI | Dihydrofolate reductase | 1.5.1.3 | 0.454 | |
| 1fdw | EST | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.454 | |
| 1ia4 | TQ6 | Dihydrofolate reductase | 1.5.1.3 | 0.454 | |
| 1jpa | ANP | Ephrin type-B receptor 2 | 2.7.10.1 | 0.454 | |
| 1txi | TX5 | Vitamin D3 receptor | / | 0.454 | |
| 2hcd | BIV | Vitamin D3 receptor A | / | 0.454 | |
| 2qd4 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.454 | |
| 2rkv | ZBA | Trichothecene 3-O-acetyltransferase | / | 0.454 | |
| 4ewn | 0VR | Imidazole glycerol phosphate synthase subunit HisF | 4.1.3 | 0.454 | |
| 4fjz | 4FJ | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.454 | |
| 1diu | BDM | Dihydrofolate reductase | 1.5.1.3 | 0.453 | |
| 2pr2 | DG1 | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.453 | |
| 3ggg | NAD | Prephenate dehydrogenase | / | 0.453 | |
| 3gob | HXX | DdmC | / | 0.453 | |
| 3sqq | 99Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.453 | |
| 4jlc | SU6 | Serine/threonine-protein kinase TBK1 | 2.7.11.1 | 0.453 | |
| 4nkv | AER | Steroid 17-alpha-hydroxylase/17,20 lyase | / | 0.453 | |
| 5c8w | PCG | cGMP-dependent protein kinase 2 | 2.7.11.12 | 0.453 | |
| 1dxo | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.452 | |
| 1fdu | EST | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.452 | |
| 1qiq | ACC | Isopenicillin N synthase | 1.21.3.1 | 0.452 | |
| 2dwb | ANP | Aurora kinase A | 2.7.11.1 | 0.452 | |
| 2xvd | AS6 | Ephrin type-B receptor 4 | 2.7.10.1 | 0.452 | |
| 2y3r | TRK | TamL | / | 0.452 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.452 | |
| 3l0l | HC3 | Nuclear receptor ROR-gamma | / | 0.452 | |
| 3m8q | DJZ | Gag-Pol polyprotein | 2.7.7.49 | 0.452 | |
| 3vrw | YS5 | Vitamin D3 receptor | / | 0.452 | |
| 4awi | AQ2 | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.452 | |
| 4lt6 | 3AT | Poly(A) polymerase gamma | 2.7.7.19 | 0.452 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.451 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.451 | |
| 1drb | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 2jb4 | A14 | Isopenicillin N synthase | 1.21.3.1 | 0.451 | |
| 2q9f | C3S | Cholesterol 24-hydroxylase | / | 0.451 | |
| 3nr4 | PYV | Abscisic acid receptor PYL2 | / | 0.451 | |
| 3s7a | 684 | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 3t2y | FAD | Sulfide-quinone reductase | / | 0.451 | |
| 3th8 | TH9 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) | 2.5.1.31 | 0.451 | |
| 3vt8 | YI3 | Vitamin D3 receptor | / | 0.451 | |
| 3zuy | TCH | Transporter | / | 0.451 | |
| 4anu | EM7 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.451 | |
| 4ia7 | BIV | Vitamin D3 receptor A | / | 0.451 | |
| 5csh | ATP | Casein kinase II subunit alpha | 2.7.11.1 | 0.451 | |
| 5dn3 | ATP | Aurora kinase A | 2.7.11.1 | 0.451 | |
| 1adf | TAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.450 | |
| 1rx8 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.450 | |
| 2e9c | B75 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) | 2.5.1.31 | 0.450 | |
| 2w1f | L0F | Aurora kinase A | 2.7.11.1 | 0.450 | |
| 3bhe | BZN | Gag-Pol polyprotein | 3.4.23.16 | 0.450 | |
| 3p3z | P3Z | Putative cytochrome P450 | / | 0.450 | |
| 4eh6 | 0ON | Mitogen-activated protein kinase 14 | / | 0.450 | |
| 4hxn | 1A7 | Bromodomain-containing protein 4 | / | 0.450 | |
| 4i7f | NVE | Gag-Pol polyprotein | 2.7.7.49 | 0.450 | |
| 4ia3 | BIV | Vitamin D3 receptor A | / | 0.450 | |
| 4jbq | VX6 | Aurora kinase A | 2.7.11.1 | 0.450 | |
| 1osv | CHC | Bile acid receptor | / | 0.449 | |
| 2c3q | GTX | Glutathione S-transferase theta-1 | 2.5.1.18 | 0.449 | |
| 2hw2 | RFP | Rifampin ADP-ribosyl transferase | / | 0.449 | |
| 2i4z | DRH | Peroxisome proliferator-activated receptor gamma | / | 0.449 | |
| 2iw9 | 4SP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.449 | |
| 2w05 | FRT | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.449 | |
| 3mdv | CL6 | Cholesterol 24-hydroxylase | / | 0.449 | |
| 3zew | STU | Ephrin type-B receptor 4 | 2.7.10.1 | 0.449 | |
| 3zh8 | C58 | Protein kinase C iota type | 2.7.11.13 | 0.449 | |
| 3zux | TCH | Transporter | / | 0.449 | |
| 4cd2 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.449 | |
| 4h4u | NDP | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.449 | |
| 4jx1 | CAH | Camphor 5-monooxygenase | 1.14.15.1 | 0.449 | |
| 4qe6 | JN3 | Bile acid receptor | / | 0.449 | |
| 5bvw | 1N1 | Epithelial discoidin domain-containing receptor 1 | 2.7.10.1 | 0.449 | |
| 2i4j | DRJ | Peroxisome proliferator-activated receptor gamma | / | 0.448 | |
| 2qk8 | MTX | Dihydrofolate reductase | / | 0.448 | |
| 2x6d | X6D | Aurora kinase A | 2.7.11.1 | 0.448 | |
| 3aty | FMN | Prostaglandin F2a synthase | / | 0.448 | |
| 3lam | KRP | Gag-Pol polyprotein | 2.7.7.49 | 0.448 | |
| 3p99 | LNP | Lanosterol 14-alpha-demethylase | / | 0.448 | |
| 3qaq | QAQ | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.448 | |
| 3rus | ADP | Chaperonin | / | 0.448 | |
| 3s2a | 2NQ | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.448 | |
| 4c3f | 7KW | Tyrosine-protein kinase Lck | 2.7.10.2 | 0.448 | |
| 4ele | 31I | Dihydrofolate reductase | / | 0.448 | |
| 4erf | 0R3 | E3 ubiquitin-protein ligase Mdm2 | 6.3.2 | 0.448 | |
| 4hvb | 19P | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.448 | |
| 4l23 | X6K | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | / | 0.448 | |
| 4nie | NBH | Nuclear receptor ROR-gamma | / | 0.448 | |
| 5itz | LOC | Tubulin beta-2B chain | / | 0.448 | |
| 1byg | STU | Tyrosine-protein kinase CSK | / | 0.447 | |
| 1cqp | 803 | Integrin alpha-L | / | 0.447 | |
| 1dhi | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.447 | |
| 1dhj | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.447 | |
| 1og5 | SWF | Cytochrome P450 2C9 | / | 0.447 | |
| 1ol7 | ADP | Aurora kinase A | 2.7.11.1 | 0.447 | |
| 2b55 | D31 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
| 2cch | ATP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
| 2hdh | NAD | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.447 | |
| 2rqf | JH3 | Hemolymph juvenile hormone binding protein | / | 0.447 | |
| 2vd5 | BI8 | Myotonin-protein kinase | 2.7.11.1 | 0.447 | |
| 3h3s | H15 | Collagen type IV alpha-3-binding protein | / | 0.447 | |
| 3lu8 | IQX | Serum albumin | / | 0.447 | |
| 3v3v | MYU | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.447 | |
| 3v8w | 0G2 | Tyrosine-protein kinase ITK/TSK | 2.7.10.2 | 0.447 | |
| 3vt7 | VDX | Vitamin D3 receptor | / | 0.447 | |
| 4ach | KDI | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.447 | |
| 4anw | O92 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.447 | |
| 4gb9 | 0WR | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.447 | |
| 4oj4 | DIF | Peroxisome proliferator-activated receptor gamma | / | 0.447 | |
| 1iol | EST | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.446 | |
| 1oc1 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.446 | |
| 1tdr | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.446 | |
| 2om9 | AJA | Peroxisome proliferator-activated receptor gamma | / | 0.446 | |
| 2q61 | SF1 | Peroxisome proliferator-activated receptor gamma | / | 0.446 | |
| 2vr1 | ATF | Biotin carboxylase | 6.3.4.14 | 0.446 | |
| 2vwy | 7X5 | Ephrin type-B receptor 4 | 2.7.10.1 | 0.446 | |
| 2wug | HPK | 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase | 3.7.1.17 | 0.446 | |
| 3kyt | HC2 | Nuclear receptor ROR-gamma | / | 0.446 | |
| 3lpb | NVB | Tyrosine-protein kinase JAK2 | / | 0.446 | |
| 3p8j | FMN | Pentaerythritol tetranitrate reductase | / | 0.446 | |
| 3pre | 3RE | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.446 | |
| 3zoi | M2W | Isopenicillin N synthase | 1.21.3.1 | 0.446 | |
| 4fhh | 0U3 | Vitamin D3 receptor A | / | 0.446 | |
| 4gub | 0Y4 | Casein kinase II subunit alpha | 2.7.11.1 | 0.446 | |
| 4i3w | NAD | Aldehyde dehydrogenase (NAD+) | / | 0.446 | |
| 1blz | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.445 | |
| 1mvs | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.445 | |
| 1ol6 | ATP | Aurora kinase A | 2.7.11.1 | 0.445 | |
| 1u59 | STU | Tyrosine-protein kinase ZAP-70 | 2.7.10.2 | 0.445 | |
| 2brb | PFQ | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.445 | |
| 2i4p | DRH | Peroxisome proliferator-activated receptor gamma | / | 0.445 | |
| 2izs | BRQ | Casein kinase I isoform gamma-3 | 2.7.11.1 | 0.445 | |
| 2j3j | HC4 | NADPH-dependent oxidoreductase 2-alkenal reductase | 1.3.1.74 | 0.445 | |
| 2vbp | VB1 | Isopenicillin N synthase | 1.21.3.1 | 0.445 | |
| 3vn2 | TLS | Peroxisome proliferator-activated receptor gamma | / | 0.445 | |
| 3w0h | W12 | Vitamin D3 receptor | / | 0.445 | |
| 4c4j | X21 | Dual specificity protein kinase TTK | 2.7.12.1 | 0.445 | |
| 4e4m | 0NH | Tyrosine-protein kinase JAK2 | / | 0.445 | |
| 4fad | 0TB | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.445 | |
| 4g3j | VNT | Lanosterol 14-alpha-demethylase | / | 0.445 | |
| 4l42 | 5FI | Ribosomal protein S6 kinase beta-1 | 2.7.11.1 | 0.445 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.445 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.445 | |
| 4xiw | AZM | Carbonic anhydrase, alpha type | / | 0.445 | |
| 1d4a | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.444 | |
| 1dz6 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.444 | |
| 1k6p | XN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.444 | |
| 1lri | CLR | Beta-elicitin cryptogein | / | 0.444 | |
| 1q41 | IXM | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.444 | |
| 2bu9 | HFV | Isopenicillin N synthase | 1.21.3.1 | 0.444 | |
| 2np8 | CC3 | Aurora kinase A | 2.7.11.1 | 0.444 | |
| 3dey | DHT | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.444 | |
| 3klm | DHT | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.444 | |
| 3qlr | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.444 | |
| 3zk5 | Z18 | Cytochrome P450 monooxygenase PikC | / | 0.444 | |
| 4bie | IE6 | Mitogen-activated protein kinase kinase kinase 5 | 2.7.11.25 | 0.444 | |
| 4fhi | 0S4 | Vitamin D3 receptor A | / | 0.444 | |
| 4g2h | 0VQ | Vitamin D3 receptor A | / | 0.444 | |
| 4h98 | 14Q | Uncharacterized protein | / | 0.444 | |
| 4l7s | G7K | Tyrosine-protein kinase ITK/TSK | 2.7.10.2 | 0.444 | |
| 4riy | ADP | Epidermal growth factor receptor | 2.7.10.1 | 0.444 | |
| 4xey | 1N1 | Tyrosine-protein kinase ABL1 | 2.7.10.2 | 0.444 | |
| 5cvh | ADP | Casein kinase II subunit alpha | 2.7.11.1 | 0.444 | |
| 5e8y | STU | TGF-beta receptor type-2 | 2.7.11.30 | 0.444 | |
| 1lp4 | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.443 | |
| 1q20 | PLO | Sulfotransferase family cytosolic 2B member 1 | 2.8.2.2 | 0.443 | |
| 1vrw | NAI | Enoyl-ACP reductase | / | 0.443 | |
| 2bxm | IMN | Serum albumin | / | 0.443 | |
| 2hk5 | 1BM | Tyrosine-protein kinase HCK | 2.7.10.2 | 0.443 | |
| 2vv9 | IM9 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.443 | |
| 3at3 | ATK | Casein kinase II subunit alpha | 2.7.11.1 | 0.443 | |
| 3c0i | 3AM | Peripheral plasma membrane protein CASK | 2.7.11.1 | 0.443 | |
| 3flw | FLW | Mitogen-activated protein kinase 14 | / | 0.443 | |
| 3flz | FLZ | Mitogen-activated protein kinase 14 | / | 0.443 | |
| 3gwf | FAD | Cyclohexanone monooxygenase | / | 0.443 | |
| 3nd1 | SAH | Precorrin-6A synthase (Deacetylating) | / | 0.443 | |
| 3neg | PYV | Abscisic acid receptor PYL1 | / | 0.443 | |
| 3qk0 | QK0 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.443 | |
| 3w0c | 6DS | Vitamin D3 receptor | / | 0.443 | |
| 4ubt | COA | Steroid 3-ketoacyl-CoA thiolase | / | 0.443 | |
| 5drd | ATP | Aurora kinase A | 2.7.11.1 | 0.443 | |
| 5e8w | STU | TGF-beta receptor type-1 | 2.7.11.30 | 0.443 | |
| 1h1s | 4SP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
| 1mkd | ZAR | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.442 | |
| 1szm | BI4 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.442 | |
| 1xdd | AAY | Integrin alpha-L | / | 0.442 | |
| 2acl | REA | Retinoic acid receptor RXR-alpha | / | 0.442 | |
| 2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.442 | |
| 2vf0 | F89 | Thymidylate synthase | / | 0.442 | |
| 2xs0 | ANP | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.442 | |
| 2yjx | YJX | Heat shock protein HSP 90-alpha | / | 0.442 | |
| 2ykj | YKJ | Heat shock protein HSP 90-alpha | / | 0.442 | |
| 3a4o | STU | Tyrosine-protein kinase Lyn | 2.7.10.2 | 0.442 | |
| 3a78 | 3EV | Vitamin D3 receptor | / | 0.442 | |
| 3gfb | NAD | L-threonine 3-dehydrogenase | / | 0.442 | |
| 3ttj | JBI | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.442 | |
| 4bqh | 9VU | UDP-N-acetylglucosamine pyrophosphorylase, putative | / | 0.442 | |
| 4c4i | X20 | Dual specificity protein kinase TTK | 2.7.12.1 | 0.442 | |
| 4enh | FVX | Cholesterol 24-hydroxylase | / | 0.442 | |
| 4g1y | 0VO | Vitamin D3 receptor A | / | 0.442 | |
| 4ia2 | BIV | Vitamin D3 receptor A | / | 0.442 | |
| 4iwo | 1H4 | Serine/threonine-protein kinase TBK1 | 2.7.11.1 | 0.442 | |
| 1bk0 | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.441 | |
| 1f17 | NAI | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.441 | |
| 1hdc | CBO | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | 1.1.1.53 | 0.441 | |
| 1jol | FFO | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 1s3z | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.441 | |
| 2itt | AEE | Epidermal growth factor receptor | 2.7.10.1 | 0.441 | |
| 2o65 | MYF | Serine/threonine-protein kinase pim-1 | 2.7.11.1 | 0.441 | |
| 2qa2 | FAD | Polyketide oxygenase CabE | / | 0.441 | |
| 2wo7 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.441 | |
| 3d7k | D7K | Benzaldehyde lyase | / | 0.441 | |
| 3f7z | 34O | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.441 | |
| 3is9 | AC7 | Gag-Pol polyprotein | 2.7.7.49 | 0.441 | |
| 3ozd | 4CT | S-methyl-5'-thioadenosine phosphorylase | / | 0.441 | |
| 3pe2 | E1B | Casein kinase II subunit alpha | 2.7.11.1 | 0.441 | |
| 3r04 | UNQ | Serine/threonine-protein kinase pim-1 | 2.7.11.1 | 0.441 | |
| 3tnw | F18 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.441 | |
| 4b7d | QLE | Cytochrome P450 monooxygenase PikC | / | 0.441 | |
| 4bbe | 3O4 | Tyrosine-protein kinase JAK2 | / | 0.441 | |
| 4g95 | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 4j97 | ACP | Fibroblast growth factor receptor 2 | / | 0.441 | |
| 4kne | 1CY | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
| 4n70 | 2HX | Serine/threonine-protein kinase pim-1 | 2.7.11.1 | 0.441 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.441 | |
| 1aoe | GW3 | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 1dxq | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.440 | |
| 1knu | YPA | Peroxisome proliferator-activated receptor gamma | / | 0.440 | |
| 1pjk | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.440 | |
| 1s19 | MC9 | Vitamin D3 receptor | / | 0.440 | |
| 1x8l | OXR | Retinol dehydratase | / | 0.440 | |
| 1xl2 | 189 | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 1yvj | 4ST | Tyrosine-protein kinase JAK3 | 2.7.10.2 | 0.440 | |
| 2of4 | 979 | Tyrosine-protein kinase Lck | 2.7.10.2 | 0.440 | |
| 2p33 | J07 | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.440 | |
| 3be9 | P04 | Casein kinase II subunit alpha | 2.7.11.1 | 0.440 | |
| 3cbs | R12 | Cellular retinoic acid-binding protein 2 | / | 0.440 | |
| 3dga | NDP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.440 | |
| 3dpd | 41A | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.440 | |
| 3il1 | B5D | Glutamate receptor 2 | / | 0.440 | |
| 3mfs | ANP | Peripheral plasma membrane protein CASK | 2.7.11.1 | 0.440 | |
| 3ml8 | ML8 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.440 | |
| 4e73 | 0NR | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.440 | |
| 4eft | EFT | Heat shock protein HSP 90-alpha | / | 0.440 | |
| 4h96 | 14Q | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 4j6d | TES | Cytochrome P450 monooxygenase | / | 0.440 | |
| 4nb6 | 444 | Nuclear receptor ROR-gamma | / | 0.440 | |
| 4o0r | X4Z | Serine/threonine-protein kinase PAK 1 | 2.7.11.1 | 0.440 |