1.690 Å
X-ray
2012-09-28
Name: | Bromodomain-containing protein 4 |
---|---|
ID: | BRD4_HUMAN |
AC: | O60885 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 14.247 |
---|---|
Number of residues: | 20 |
Including | |
Standard Amino Acids: | 19 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.184 | 391.500 |
% Hydrophobic | % Polar |
---|---|
63.79 | 36.21 |
According to VolSite |
HET Code: | 14Z |
---|---|
Formula: | C11H15N3O3S |
Molecular weight: | 269.320 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 53.89 % |
Polar Surface area: | 86.88 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 2 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
29.6642 | 16.37 | -1.57294 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CAN | CH2 | TRP- 81 | 3.62 | 0 | Hydrophobic |
CAN | CG | PRO- 82 | 4.05 | 0 | Hydrophobic |
CAF | CB | PRO- 82 | 4.2 | 0 | Hydrophobic |
CAF | CD1 | LEU- 92 | 3.72 | 0 | Hydrophobic |
CAE | CD1 | LEU- 94 | 4.43 | 0 | Hydrophobic |
CAC | CD1 | LEU- 94 | 4.04 | 0 | Hydrophobic |
OAK | ND2 | ASN- 140 | 2.86 | 166.5 | H-Bond (Protein Donor) |
NAG | OD1 | ASN- 140 | 3.19 | 132.84 | H-Bond (Ligand Donor) |
CAO | CB | ASP- 145 | 3.94 | 0 | Hydrophobic |
CAO | CB | ILE- 146 | 4.41 | 0 | Hydrophobic |
CAN | CD1 | ILE- 146 | 4.06 | 0 | Hydrophobic |
CAC | CB | ILE- 146 | 4.14 | 0 | Hydrophobic |
CAE | CD1 | ILE- 146 | 3.74 | 0 | Hydrophobic |
CAO | SD | MET- 149 | 3.41 | 0 | Hydrophobic |