1.690 Å
X-ray
2012-09-28
| Name: | Bromodomain-containing protein 4 |
|---|---|
| ID: | BRD4_HUMAN |
| AC: | O60885 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 14.247 |
|---|---|
| Number of residues: | 20 |
| Including | |
| Standard Amino Acids: | 19 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.184 | 391.500 |
| % Hydrophobic | % Polar |
|---|---|
| 63.79 | 36.21 |
| According to VolSite | |

| HET Code: | 14Z |
|---|---|
| Formula: | C11H15N3O3S |
| Molecular weight: | 269.320 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 53.89 % |
| Polar Surface area: | 86.88 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 3 |
| H-Bond Donors: | 2 |
| Rings: | 2 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 3 |
| X | Y | Z |
|---|---|---|
| 29.6642 | 16.37 | -1.57294 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CAN | CH2 | TRP- 81 | 3.62 | 0 | Hydrophobic |
| CAN | CG | PRO- 82 | 4.05 | 0 | Hydrophobic |
| CAF | CB | PRO- 82 | 4.2 | 0 | Hydrophobic |
| CAF | CD1 | LEU- 92 | 3.72 | 0 | Hydrophobic |
| CAE | CD1 | LEU- 94 | 4.43 | 0 | Hydrophobic |
| CAC | CD1 | LEU- 94 | 4.04 | 0 | Hydrophobic |
| OAK | ND2 | ASN- 140 | 2.86 | 166.5 | H-Bond (Protein Donor) |
| NAG | OD1 | ASN- 140 | 3.19 | 132.84 | H-Bond (Ligand Donor) |
| CAO | CB | ASP- 145 | 3.94 | 0 | Hydrophobic |
| CAO | CB | ILE- 146 | 4.41 | 0 | Hydrophobic |
| CAN | CD1 | ILE- 146 | 4.06 | 0 | Hydrophobic |
| CAC | CB | ILE- 146 | 4.14 | 0 | Hydrophobic |
| CAE | CD1 | ILE- 146 | 3.74 | 0 | Hydrophobic |
| CAO | SD | MET- 149 | 3.41 | 0 | Hydrophobic |