1.830 Å
X-ray
2012-07-14
Name: | Lanosterol 14-alpha-demethylase |
---|---|
ID: | Q385E8_TRYB2 |
AC: | Q385E8 |
Organism: | Trypanosoma brucei brucei |
Reign: | Eukaryota |
TaxID: | 185431 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
D | 100 % |
B-Factor: | 29.741 |
---|---|
Number of residues: | 36 |
Including | |
Standard Amino Acids: | 35 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.337 | 2251.125 |
% Hydrophobic | % Polar |
---|---|
59.07 | 40.93 |
According to VolSite |
HET Code: | VNT |
---|---|
Formula: | C25H18Cl2N6O2 |
Molecular weight: | 505.355 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 59.74 % |
Polar Surface area: | 98.73 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 1 |
Rings: | 5 |
Aromatic rings: | 5 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
-39.0857 | -52.1508 | 49.7923 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
NAW | OH | TYR- 103 | 3.14 | 149.71 | H-Bond (Ligand Donor) |
CAK | SD | MET- 106 | 4.22 | 0 | Hydrophobic |
CLC | CE | MET- 106 | 3.97 | 0 | Hydrophobic |
CLC | CZ | PHE- 110 | 4.17 | 0 | Hydrophobic |
CLB | CE2 | PHE- 110 | 4.02 | 0 | Hydrophobic |
CAQ | CZ | PHE- 110 | 3.24 | 0 | Hydrophobic |
CLB | CB | ALA- 115 | 4.48 | 0 | Hydrophobic |
CLB | CE2 | TYR- 116 | 4.01 | 0 | Hydrophobic |
CLB | CD2 | LEU- 127 | 4.49 | 0 | Hydrophobic |
CLB | CB | ALA- 287 | 3.77 | 0 | Hydrophobic |
CAQ | CB | ALA- 287 | 4.18 | 0 | Hydrophobic |
CLC | CB | PHE- 290 | 3.31 | 0 | Hydrophobic |
CBA | CB | ALA- 291 | 4.02 | 0 | Hydrophobic |
CAR | CD1 | LEU- 356 | 3.7 | 0 | Hydrophobic |
CAJ | CD2 | LEU- 356 | 3.66 | 0 | Hydrophobic |
CAE | CG | MET- 358 | 3.75 | 0 | Hydrophobic |
CAH | CE | MET- 360 | 3.65 | 0 | Hydrophobic |
CAL | CE | MET- 460 | 3.99 | 0 | Hydrophobic |