1.290 Å
X-ray
2013-07-19
Name: | Bromodomain-containing protein 4 |
---|---|
ID: | BRD4_HUMAN |
AC: | O60885 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 21.850 |
---|---|
Number of residues: | 15 |
Including | |
Standard Amino Acids: | 14 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.186 | 371.250 |
% Hydrophobic | % Polar |
---|---|
70.91 | 29.09 |
According to VolSite |
HET Code: | 1XA |
---|---|
Formula: | C10H10N2O |
Molecular weight: | 174.199 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 56.14 % |
Polar Surface area: | 52.05 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
-10.1959 | -6.18038 | 0.495538 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CAG | CB | PRO- 82 | 4.09 | 0 | Hydrophobic |
CAL | CB | PRO- 82 | 3.89 | 0 | Hydrophobic |
CAG | CE1 | PHE- 83 | 4.13 | 0 | Hydrophobic |
CAG | CG2 | VAL- 87 | 3.88 | 0 | Hydrophobic |
CAL | CD2 | LEU- 92 | 3.49 | 0 | Hydrophobic |
CAM | CD1 | LEU- 92 | 3.5 | 0 | Hydrophobic |
OAB | ND2 | ASN- 140 | 2.96 | 173.37 | H-Bond (Protein Donor) |
NAF | OD1 | ASN- 140 | 3.17 | 129.11 | H-Bond (Ligand Donor) |
CAG | CD1 | ILE- 146 | 3.99 | 0 | Hydrophobic |
CAI | CD1 | ILE- 146 | 3.6 | 0 | Hydrophobic |