2.500 Å
X-ray
2012-04-13
Name: | Cholesterol 24-hydroxylase |
---|---|
ID: | CP46A_HUMAN |
AC: | Q9Y6A2 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 38.754 |
---|---|
Number of residues: | 36 |
Including | |
Standard Amino Acids: | 34 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.283 | 1464.750 |
% Hydrophobic | % Polar |
---|---|
55.07 | 44.93 |
According to VolSite |
HET Code: | FVX |
---|---|
Formula: | C15H22F3N2O2 |
Molecular weight: | 319.343 g/mol |
DrugBank ID: | DB00176 |
Buried Surface Area: | 72.16 % |
Polar Surface area: | 58.46 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 1 |
Rings: | 1 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 10 |
X | Y | Z |
---|---|---|
0.206545 | 31.4143 | -20.9235 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
F22 | CZ | PHE- 80 | 3.23 | 0 | Hydrophobic |
F20 | CE2 | PHE- 80 | 4.28 | 0 | Hydrophobic |
F20 | CZ | TYR- 109 | 4.48 | 0 | Hydrophobic |
C5 | CD2 | LEU- 112 | 4.07 | 0 | Hydrophobic |
C1 | CZ | PHE- 121 | 3.69 | 0 | Hydrophobic |
C4 | CE1 | PHE- 121 | 3.88 | 0 | Hydrophobic |
C1 | CD2 | LEU- 219 | 3.7 | 0 | Hydrophobic |
C1 | CD1 | ILE- 222 | 3.49 | 0 | Hydrophobic |
C1 | CG2 | ILE- 301 | 3.71 | 0 | Hydrophobic |
C3 | CG2 | ILE- 301 | 3.7 | 0 | Hydrophobic |
C11 | CB | ALA- 302 | 3.34 | 0 | Hydrophobic |
N12 | O | ALA- 302 | 2.82 | 136.64 | H-Bond (Ligand Donor) |
N12 | OG1 | THR- 306 | 3.02 | 159.2 | H-Bond (Ligand Donor) |
C10 | CG2 | THR- 306 | 3.55 | 0 | Hydrophobic |
C18 | CB | ALA- 367 | 4.08 | 0 | Hydrophobic |
F20 | CH2 | TRP- 368 | 4.5 | 0 | Hydrophobic |
F22 | CZ2 | TRP- 368 | 3.21 | 0 | Hydrophobic |
F20 | CE2 | PHE- 371 | 3.76 | 0 | Hydrophobic |
C1 | CB | ALA- 474 | 3.74 | 0 | Hydrophobic |
C6 | CG2 | THR- 475 | 3.8 | 0 | Hydrophobic |