1.760 Å
X-ray
2012-11-12
Name: | Bromodomain-containing protein 4 |
---|---|
ID: | BRD4_HUMAN |
AC: | O60885 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 14.900 |
---|---|
Number of residues: | 20 |
Including | |
Standard Amino Acids: | 19 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.034 | 337.500 |
% Hydrophobic | % Polar |
---|---|
72.00 | 28.00 |
According to VolSite |
HET Code: | 1A6 |
---|---|
Formula: | C11H10N4OS |
Molecular weight: | 246.288 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 58.21 % |
Polar Surface area: | 81.52 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 0 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
-10.4009 | -6.19641 | 0.586294 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CAA | CH2 | TRP- 81 | 3.49 | 0 | Hydrophobic |
CAA | CG | PRO- 82 | 4.36 | 0 | Hydrophobic |
SAL | CD1 | LEU- 92 | 3.98 | 0 | Hydrophobic |
SAL | CD1 | LEU- 94 | 3.44 | 0 | Hydrophobic |
SAL | CE2 | TYR- 139 | 4.2 | 0 | Hydrophobic |
NAH | ND2 | ASN- 140 | 2.91 | 166.42 | H-Bond (Protein Donor) |
NAI | ND2 | ASN- 140 | 3.41 | 135.63 | H-Bond (Protein Donor) |
CAA | CD1 | ILE- 146 | 3.88 | 0 | Hydrophobic |
CAG | CG2 | ILE- 146 | 4.23 | 0 | Hydrophobic |
CAA | SD | MET- 149 | 4.36 | 0 | Hydrophobic |