2.400 Å
X-ray
2013-06-18
Name: | Serum albumin |
---|---|
ID: | ALBU_HUMAN |
AC: | P02768 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 96 % |
B | 4 % |
B-Factor: | 46.397 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.389 | 2136.375 |
% Hydrophobic | % Polar |
---|---|
40.76 | 59.24 |
According to VolSite |
HET Code: | EHF |
---|---|
Formula: | C20H17N2O5 |
Molecular weight: | 365.359 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 59.91 % |
Polar Surface area: | 113.79 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 2 |
Rings: | 4 |
Aromatic rings: | 2 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
-9.15593 | -7.42189 | 8.81463 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C19 | CB | LEU- 115 | 4.27 | 0 | Hydrophobic |
C19 | CB | ARG- 117 | 4.11 | 0 | Hydrophobic |
O22 | NE | ARG- 117 | 2.86 | 165.63 | H-Bond (Protein Donor) |
O23 | NH2 | ARG- 117 | 3.22 | 162.02 | H-Bond (Protein Donor) |
O22 | CZ | ARG- 117 | 3.72 | 0 | Ionic (Protein Cationic) |
O23 | CZ | ARG- 117 | 3.98 | 0 | Ionic (Protein Cationic) |
C26 | CD1 | TYR- 138 | 4.17 | 0 | Hydrophobic |
C26 | CE1 | TYR- 161 | 3.86 | 0 | Hydrophobic |
C19 | CD | ARG- 186 | 4.37 | 0 | Hydrophobic |
O27 | NH2 | ARG- 186 | 2.65 | 145.28 | H-Bond (Protein Donor) |