Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1mu8 | CDB | Prothrombin | 3.4.21.5 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 1mu8 | CDB | Prothrombin | 3.4.21.5 | 1.000 | |
| 1mu6 | CDA | Prothrombin | 3.4.21.5 | 0.775 | |
| 1ta6 | 177 | Prothrombin | 3.4.21.5 | 0.775 | |
| 1zgv | 501 | Prothrombin | 3.4.21.5 | 0.725 | |
| 1z71 | L17 | Prothrombin | 3.4.21.5 | 0.704 | |
| 1zgi | 382 | Prothrombin | 3.4.21.5 | 0.680 | |
| 1d6w | 00R | Prothrombin | 3.4.21.5 | 0.658 | |
| 3c1k | T15 | Prothrombin | 3.4.21.5 | 0.655 | |
| 3qwc | 98P | Prothrombin | 3.4.21.5 | 0.649 | |
| 1t4v | 14A | Prothrombin | 3.4.21.5 | 0.648 | |
| 2jh6 | 894 | Prothrombin | 3.4.21.5 | 0.645 | |
| 2zfq | 45U | Prothrombin | 3.4.21.5 | 0.643 | |
| 1mue | CDD | Prothrombin | 3.4.21.5 | 0.639 | |
| 2bvs | 2CE | Prothrombin | 3.4.21.5 | 0.639 | |
| 1t4u | 81A | Prothrombin | 3.4.21.5 | 0.637 | |
| 2zc9 | 22U | Prothrombin | 3.4.21.5 | 0.637 | |
| 2jh5 | 895 | Prothrombin | 3.4.21.5 | 0.634 | |
| 2jh0 | 701 | Prothrombin | 3.4.21.5 | 0.633 | |
| 2gde | SN3 | Prothrombin | 3.4.21.5 | 0.631 | |
| 1ype | UIP | Prothrombin | 3.4.21.5 | 0.626 | |
| 2ziq | 26U | Prothrombin | 3.4.21.5 | 0.626 | |
| 1ypl | RA8 | Prothrombin | 3.4.21.5 | 0.625 | |
| 2zi2 | 24U | Prothrombin | 3.4.21.5 | 0.624 | |
| 2zda | 32U | Prothrombin | 3.4.21.5 | 0.621 | |
| 2cn0 | F25 | Prothrombin | 3.4.21.5 | 0.614 | |
| 1nm6 | L86 | Prothrombin | 3.4.21.5 | 0.611 | |
| 1ypg | UIR | Prothrombin | 3.4.21.5 | 0.610 | |
| 2a2x | NA9 | Prothrombin | 3.4.21.5 | 0.608 | |
| 1d4p | BPP | Prothrombin | 3.4.21.5 | 0.606 | |
| 2r2m | I50 | Prothrombin | 3.4.21.5 | 0.603 | |
| 2zhf | 49U | Prothrombin | 3.4.21.5 | 0.601 | |
| 3dhk | 23U | Prothrombin | 3.4.21.5 | 0.600 | |
| 2uuk | 897 | Prothrombin | 3.4.21.5 | 0.599 | |
| 1c4v | IH2 | Prothrombin | 3.4.21.5 | 0.598 | |
| 1c4y | IH3 | Prothrombin | 3.4.21.5 | 0.598 | |
| 2zfr | 46U | Prothrombin | 3.4.21.5 | 0.594 | |
| 2zhq | 27U | Prothrombin | 3.4.21.5 | 0.594 | |
| 4ax9 | N5N | Prothrombin | 3.4.21.5 | 0.594 | |
| 2cf8 | ESH | Prothrombin | 3.4.21.5 | 0.593 | |
| 2zdv | 37U | Prothrombin | 3.4.21.5 | 0.593 | |
| 3egk | M18 | Prothrombin | 3.4.21.5 | 0.592 | |
| 2anm | CDO | Prothrombin | 3.4.21.5 | 0.589 | |
| 1nzq | 162 | Prothrombin | 3.4.21.5 | 0.588 | |
| 1ta2 | 176 | Prothrombin | 3.4.21.5 | 0.588 | |
| 4lxb | 7R9 | Prothrombin | 3.4.21.5 | 0.587 | |
| 2zhe | 13U | Prothrombin | 3.4.21.5 | 0.586 | |
| 1d3d | BZT | Prothrombin | 3.4.21.5 | 0.585 | |
| 1ypm | RA4 | Prothrombin | 3.4.21.5 | 0.583 | |
| 2zgx | 29U | Prothrombin | 3.4.21.5 | 0.583 | |
| 1xm1 | GAH | Prothrombin | 3.4.21.5 | 0.581 | |
| 1d9i | 00P | Prothrombin | 3.4.21.5 | 0.578 | |
| 2cf9 | 348 | Prothrombin | 3.4.21.5 | 0.578 | |
| 4ayy | 9MX | Prothrombin | 3.4.21.5 | 0.577 | |
| 2znk | 31U | Prothrombin | 3.4.21.5 | 0.576 | |
| 1ghv | 120 | Prothrombin | 3.4.21.5 | 0.575 | |
| 1gj4 | 132 | Prothrombin | 3.4.21.5 | 0.575 | |
| 1d3p | BT3 | Prothrombin | 3.4.21.5 | 0.573 | |
| 2zg0 | 50U | Prothrombin | 3.4.21.5 | 0.573 | |
| 3biv | 11U | Prothrombin | 3.4.21.5 | 0.573 | |
| 1a4w | QWE | Prothrombin | 3.4.21.5 | 0.569 | |
| 2v3o | I26 | Prothrombin | 3.4.21.5 | 0.569 | |
| 1o2g | 696 | Prothrombin | 3.4.21.5 | 0.568 | |
| 4az2 | 9MU | Prothrombin | 3.4.21.5 | 0.568 | |
| 4hfp | 15U | Prothrombin | 3.4.21.5 | 0.568 | |
| 1afe | ALZ | Prothrombin | 3.4.21.5 | 0.565 | |
| 1bcu | PRL | Prothrombin | 3.4.21.5 | 0.565 | |
| 4ayv | 9MQ | Prothrombin | 3.4.21.5 | 0.565 | |
| 2bdy | UNB | Prothrombin | 3.4.21.5 | 0.564 | |
| 1o5g | CR9 | Prothrombin | 3.4.21.5 | 0.563 | |
| 4n3l | 2FN | Prothrombin | 3.4.21.5 | 0.562 | |
| 1sb1 | 165 | Prothrombin | 3.4.21.5 | 0.561 | |
| 1ae8 | AZL | Prothrombin | 3.4.21.5 | 0.559 | |
| 2zfp | 19U | Prothrombin | 3.4.21.5 | 0.556 | |
| 1riw | OSC | Prothrombin | 3.4.21.5 | 0.555 | |
| 1uvs | I11 | Prothrombin | 3.4.21.5 | 0.553 | |
| 1k21 | IGN | Prothrombin | 3.4.21.5 | 0.552 | |
| 1oyt | FSN | Prothrombin | 3.4.21.5 | 0.551 | |
| 1gj5 | 130 | Prothrombin | 3.4.21.5 | 0.550 | |
| 1ypj | UIB | Prothrombin | 3.4.21.5 | 0.550 | |
| 4e7r | 0NW | Prothrombin | 3.4.21.5 | 0.549 | |
| 1c5n | ESI | Prothrombin | 3.4.21.5 | 0.546 | |
| 1kts | C24 | Prothrombin | 3.4.21.5 | 0.543 | |
| 4loy | 6XS | Prothrombin | 3.4.21.5 | 0.543 | |
| 1c4u | IH1 | Prothrombin | 3.4.21.5 | 0.542 | |
| 2v3h | I25 | Prothrombin | 3.4.21.5 | 0.542 | |
| 2zff | 53U | Prothrombin | 3.4.21.5 | 0.542 | |
| 3hat | GLY_VAL_ARG_RNG | Prothrombin | 3.4.21.5 | 0.541 | |
| 3biu | 10U | Prothrombin | 3.4.21.5 | 0.540 | |
| 7kme | ACE_0BN_CHG_PRR | Prothrombin | 3.4.21.5 | 0.536 | |
| 2zhw | 12U | Prothrombin | 3.4.21.5 | 0.534 | |
| 1k22 | MEL | Prothrombin | 3.4.21.5 | 0.531 | |
| 3eq0 | 2TS | Prothrombin | 3.4.21.5 | 0.531 | |
| 1ypk | CCR | Prothrombin | 3.4.21.5 | 0.530 | |
| 2zf0 | 51U | Prothrombin | 3.4.21.5 | 0.530 | |
| 1o0d | 163 | Prothrombin | 3.4.21.5 | 0.529 | |
| 1ny2 | ARG_PRO_PRO_GLY | Prothrombin | 3.4.21.5 | 0.526 | |
| 3dux | 64U | Prothrombin | 3.4.21.5 | 0.526 | |
| 4bam | MM9 | Prothrombin | 3.4.21.5 | 0.526 | |
| 3f68 | 91U | Prothrombin | 3.4.21.5 | 0.523 | |
| 2zgb | 21U | Prothrombin | 3.4.21.5 | 0.519 | |
| 3qto | 10P | Prothrombin | 3.4.21.5 | 0.518 | |
| 1nt1 | T76 | Prothrombin | 3.4.21.5 | 0.512 | |
| 1jwt | BLI | Prothrombin | 3.4.21.5 | 0.511 | |
| 3qtv | 06P | Prothrombin | 3.4.21.5 | 0.511 | |
| 3p17 | 99P | Prothrombin | 3.4.21.5 | 0.510 | |
| 2pks | G44 | Prothrombin | 3.4.21.5 | 0.507 | |
| 3qdz | PRO_ALA_PRO_ARG | Prothrombin | 3.4.21.5 | 0.506 | |
| 1vzq | SHY | Prothrombin | 3.4.21.5 | 0.503 | |
| 4m6j | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.503 | |
| 4bak | M67 | Prothrombin | 3.4.21.5 | 0.500 | |
| 4rn6 | 15U | Prothrombin | 3.4.21.5 | 0.498 | |
| 1zrb | 062 | Prothrombin | 3.4.21.5 | 0.494 | |
| 3zoi | M2W | Isopenicillin N synthase | 1.21.3.1 | 0.490 | |
| 1zsk | 421 | Coagulation factor XI | 3.4.21.27 | 0.489 | |
| 1dr5 | NAP | Dihydrofolate reductase | 1.5.1.3 | 0.487 | |
| 1dr2 | TAP | Dihydrofolate reductase | 1.5.1.3 | 0.485 | |
| 4bfx | ZVX | Pantothenate kinase | 2.7.1.33 | 0.484 | |
| 3uzw | NAP | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.482 | |
| 2rqf | JH3 | Hemolymph juvenile hormone binding protein | / | 0.481 | |
| 2uuj | 896 | Prothrombin | 3.4.21.5 | 0.478 | |
| 2zcv | NDP | Quinone oxidoreductase 2 | 1.6.5.2 | 0.478 | |
| 4bah | MEL | Prothrombin | 3.4.21.5 | 0.478 | |
| 1nqv | LMZ | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.477 | |
| 1owe | 675 | Urokinase-type plasminogen activator | 3.4.21.73 | 0.477 | |
| 5cmx | 0G6 | Prothrombin | 3.4.21.5 | 0.477 | |
| 4a86 | 2AN | Major pollen allergen Bet v 1-A | / | 0.476 | |
| 1hb3 | SCV | Isopenicillin N synthase | 1.21.3.1 | 0.475 | |
| 3dy8 | 5GP | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.475 | |
| 1nup | NMN | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 | / | 0.473 | |
| 3dga | NDP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.473 | |
| 4fuf | 8UP | Urokinase-type plasminogen activator | 3.4.21.73 | 0.473 | |
| 1ia4 | TQ6 | Dihydrofolate reductase | 1.5.1.3 | 0.472 | |
| 2j4l | UTP | Uridylate kinase | 2.7.4.22 | 0.472 | |
| 3c27 | DKK | Prothrombin | 3.4.21.5 | 0.472 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.472 | |
| 4btt | VYR | Coagulation factor X | 3.4.21.6 | 0.471 | |
| 3oaf | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.470 | |
| 4emd | C5P | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | / | 0.469 | |
| 4g95 | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.469 | |
| 4kby | C2E | Stimulator of interferon genes protein | / | 0.469 | |
| 1bk0 | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.468 | |
| 1qiq | ACC | Isopenicillin N synthase | 1.21.3.1 | 0.468 | |
| 2g21 | L1B | Renin | 3.4.23.15 | 0.468 | |
| 2qim | ZEA | Class 10 plant pathogenesis-related protein | / | 0.468 | |
| 1c1w | BAH | Prothrombin | 3.4.21.5 | 0.467 | |
| 2bxt | C2D | Prothrombin | 3.4.21.5 | 0.467 | |
| 2cv2 | GSU | Glutamate--tRNA ligase | 6.1.1.17 | 0.467 | |
| 3s8p | SAM | Histone-lysine N-methyltransferase KMT5B | 2.1.1.43 | 0.467 | |
| 4gv4 | MEJ | Poly [ADP-ribose] polymerase 3 | 2.4.2.30 | 0.467 | |
| 1k4m | NAD | Nicotinate-nucleotide adenylyltransferase | 2.7.7.18 | 0.466 | |
| 2q85 | 973 | UDP-N-acetylenolpyruvoylglucosamine reductase | 1.3.1.98 | 0.466 | |
| 2y6f | M9F | Isopenicillin N synthase | 1.21.3.1 | 0.466 | |
| 4x7u | ZM3 | Mycinamicin III 3''-O-methyltransferase | 2.1.1.237 | 0.466 | |
| 3utu | 1TS | Prothrombin | 3.4.21.5 | 0.465 | |
| 1drh | NAP | Dihydrofolate reductase | 1.5.1.3 | 0.463 | |
| 3d84 | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.463 | |
| 3qe2 | FMN | NADPH--cytochrome P450 reductase | / | 0.463 | |
| 3sor | O58 | Coagulation factor XI | 3.4.21.27 | 0.463 | |
| 4i1c | 1BE | Beta-secretase 1 | 3.4.23.46 | 0.463 | |
| 2h2q | NAP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.462 | |
| 2jb4 | A14 | Isopenicillin N synthase | 1.21.3.1 | 0.462 | |
| 4xgu | ADP | Putative pachytene checkpoint protein 2 | / | 0.462 | |
| 1bil | 0IU | Renin | 3.4.23.15 | 0.461 | |
| 1hb1 | OCV | Isopenicillin N synthase | 1.21.3.1 | 0.461 | |
| 4fui | UI3 | Urokinase-type plasminogen activator | 3.4.21.73 | 0.461 | |
| 2nr4 | FMN | Conserved protein | / | 0.460 | |
| 4ey6 | GNT | Acetylcholinesterase | 3.1.1.7 | 0.460 | |
| 2g1s | 4IG | Renin | 3.4.23.15 | 0.459 | |
| 4eag | ATP | 5'-AMP-activated protein kinase subunit gamma-1 | / | 0.459 | |
| 4kq6 | DLZ | 6,7-dimethyl-8-ribityllumazine synthase | / | 0.459 | |
| 1wqv | PSM | Coagulation factor VII | 3.4.21.21 | 0.458 | |
| 2g1y | 5IG | Renin | 3.4.23.15 | 0.458 | |
| 1ia3 | TQ5 | Dihydrofolate reductase | 1.5.1.3 | 0.457 | |
| 1w7g | MIU | Prothrombin | 3.4.21.5 | 0.457 | |
| 3d91 | REM | Renin | 3.4.23.15 | 0.457 | |
| 3fap | ARD | Peptidyl-prolyl cis-trans isomerase FKBP1A | 5.2.1.8 | 0.457 | |
| 3fap | ARD | Serine/threonine-protein kinase mTOR | 2.7.11.1 | 0.457 | |
| 4a83 | DXC | Major pollen allergen Bet v 1-A | / | 0.457 | |
| 4hhz | 15S | Poly [ADP-ribose] polymerase 1 | 2.4.2.30 | 0.457 | |
| 4r5w | XAV | Poly [ADP-ribose] polymerase 1 | 2.4.2.30 | 0.457 | |
| 1q0r | AKT | Aclacinomycin methylesterase RdmC | 3.1.1.95 | 0.456 | |
| 1zxm | ANP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.456 | |
| 2xfy | ACX | Beta-amylase | 3.2.1.2 | 0.456 | |
| 3dys | IBM | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.456 | |
| 3v0x | ANH | Cationic trypsin | 3.4.21.4 | 0.456 | |
| 2g24 | 7IG | Renin | 3.4.23.15 | 0.455 | |
| 2ivi | ACW | Isopenicillin N synthase | 1.21.3.1 | 0.455 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.455 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.455 | |
| 4x7w | MVI | Mycinamicin III 3''-O-methyltransferase | 2.1.1.237 | 0.455 | |
| 2b36 | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.454 | |
| 2xc3 | RT8 | Steroid C26-monooxygenase | 1.14.13.141 | 0.454 | |
| 3hl0 | NAD | Maleylacetate reductase | / | 0.454 | |
| 3k1w | BFX | Renin | 3.4.23.15 | 0.454 | |
| 4j0v | 1H7 | Beta-secretase 1 | 3.4.23.46 | 0.454 | |
| 1dr3 | TAP | Dihydrofolate reductase | 1.5.1.3 | 0.453 | |
| 1ex7 | 5GP | Guanylate kinase | 2.7.4.8 | 0.453 | |
| 1nj6 | A5A | Proline--tRNA ligase | / | 0.453 | |
| 1rne | C60 | Renin | 3.4.23.15 | 0.453 | |
| 1umk | FAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.453 | |
| 3s1d | ZIR | Cytokinin dehydrogenase 1 | 1.5.99.12 | 0.453 | |
| 4a80 | 2AN | Major pollen allergen Bet v 1-A | / | 0.453 | |
| 4azy | 7F3 | Beta-secretase 1 | 3.4.23.46 | 0.453 | |
| 1blz | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.452 | |
| 1nfy | RTR | Coagulation factor X | 3.4.21.6 | 0.452 | |
| 1u1g | BBB | Uridine phosphorylase | 2.4.2.3 | 0.452 | |
| 2g1o | 2IG | Renin | 3.4.23.15 | 0.452 | |
| 2r59 | PH0 | Leukotriene A-4 hydrolase | 3.3.2.6 | 0.452 | |
| 2vbd | V10 | Isopenicillin N synthase | 1.21.3.1 | 0.452 | |
| 4ban | M6S | Prothrombin | 3.4.21.5 | 0.452 | |
| 1obn | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.451 | |
| 1xe6 | 5FP | Plasmepsin-2 | 3.4.23.39 | 0.451 | |
| 2a0x | DIH | Purine nucleoside phosphorylase | 2.4.2.1 | 0.451 | |
| 2g20 | L1A | Renin | 3.4.23.15 | 0.451 | |
| 2y60 | M8F | Isopenicillin N synthase | 1.21.3.1 | 0.451 | |
| 3g70 | A5T | Renin | 3.4.23.15 | 0.451 | |
| 3kjs | NAP | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.451 | |
| 3kxw | 1ZZ | Saframycin Mx1 synthetase B | / | 0.451 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.451 | |
| 3zks | WZV | Beta-secretase 2 | 3.4.23.45 | 0.451 | |
| 4acu | QN7 | Beta-secretase 1 | 3.4.23.46 | 0.451 | |
| 2fzm | FAD | Bifunctional protein PutA | 1.5.5.2 | 0.450 | |
| 2g1n | 1IG | Renin | 3.4.23.15 | 0.450 | |
| 3oad | LPO | Renin | 3.4.23.15 | 0.450 | |
| 3qj0 | QI3 | Botulinum neurotoxin type A | 3.4.24.69 | 0.450 | |
| 4b67 | NAP | L-ornithine N(5)-monooxygenase | / | 0.450 | |
| 4r1f | ADP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.450 | |
| 4rlh | 0WE | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.450 | |
| 4rvg | TYD | D-mycarose 3-C-methyltransferase | / | 0.450 | |
| 4x7z | ZM3 | Mycinamicin III 3''-O-methyltransferase | 2.1.1.237 | 0.450 | |
| 1dr3 | HBI | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 1iqg | XME | Coagulation factor X | 3.4.21.6 | 0.449 | |
| 2am2 | 2LG | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.449 | |
| 3dg8 | NDP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.449 | |
| 3e34 | ED1 | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | / | 0.449 | |
| 3e34 | ED1 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.449 | |
| 3h3t | 16H | Collagen type IV alpha-3-binding protein | / | 0.449 | |
| 3phi | NDP | Shikimate dehydrogenase (NADP(+)) | / | 0.449 | |
| 3qlr | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 4a81 | DXC | Major pollen allergen Bet v 1-A | / | 0.449 | |
| 4epl | JAI | Jasmonic acid-amido synthetase JAR1 | 6.3.2 | 0.449 | |
| 4gh6 | LUO | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.449 | |
| 4gv0 | 8ME | Poly [ADP-ribose] polymerase 3 | 2.4.2.30 | 0.449 | |
| 5c6c | CMP | cGMP-dependent protein kinase 2 | 2.7.11.12 | 0.449 | |
| 1ndh | FAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.448 | |
| 1oc1 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.448 | |
| 1sqt | UI3 | Urokinase-type plasminogen activator | 3.4.21.73 | 0.448 | |
| 2b37 | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.448 | |
| 2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.448 | |
| 2i4q | UA4 | Renin | 3.4.23.15 | 0.448 | |
| 2ojt | UBA | Glutamate receptor ionotropic, kainate 1 | / | 0.448 | |
| 3bnk | FMN | Flavoredoxin | / | 0.448 | |
| 3vyf | VYF | Renin | 3.4.23.15 | 0.448 | |
| 4anx | 534 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.448 | |
| 4cdm | FO1 | Deoxyribodipyrimidine photolyase | / | 0.448 | |
| 4mrm | 2BY | Gamma-aminobutyric acid type B receptor subunit 1 | / | 0.448 | |
| 5fd8 | A5A | Putative carboxypeptidase yocD | / | 0.448 | |
| 5la6 | GDP | Tubulin beta-2B chain | / | 0.448 | |
| 1a9z | UPG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.447 | |
| 1esm | COA | Pantothenate kinase | 2.7.1.33 | 0.447 | |
| 1h66 | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.447 | |
| 1i7p | FAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.447 | |
| 1n95 | HFP | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | / | 0.447 | |
| 1n95 | HFP | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.447 | |
| 2f7x | 4EA | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.447 | |
| 2hxz | H7J | Cathepsin S | 3.4.22.27 | 0.447 | |
| 2q1s | NAI | Putative nucleotide sugar epimerase/ dehydratase | / | 0.447 | |
| 3dy8 | IBM | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.447 | |
| 3fpd | SAH | Histone-lysine N-methyltransferase EHMT1 | / | 0.447 | |
| 3oqf | S51 | Renin | 3.4.23.15 | 0.447 | |
| 3qt6 | 2P0 | Mevalonate diphosphate decarboxylase | / | 0.447 | |
| 3u33 | FAD | Putative acyl-CoA dehydrogenase AidB | 1.3.99 | 0.447 | |
| 3uic | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.447 | |
| 4e2y | JHZ | Methyltransferase | / | 0.447 | |
| 4jlm | 1NN | Deoxycytidine kinase | 2.7.1.74 | 0.447 | |
| 4ms1 | 381 | Gamma-aminobutyric acid type B receptor subunit 1 | / | 0.447 | |
| 4xr9 | NAD | CalS8 | / | 0.447 | |
| 1u2g | APR | NAD(P) transhydrogenase subunit alpha part 1 | 1.6.1.2 | 0.446 | |
| 1uk1 | FRQ | Poly [ADP-ribose] polymerase 1 | 2.4.2.30 | 0.446 | |
| 2a58 | RBF | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.446 | |
| 2a5k | AZP | Replicase polyprotein 1ab | 3.4.22 | 0.446 | |
| 2cji | GSK | Coagulation factor X | 3.4.21.6 | 0.446 | |
| 2fw3 | BUI | Carnitine O-palmitoyltransferase 2, mitochondrial | 2.3.1.21 | 0.446 | |
| 3fr5 | I4A | Fatty acid-binding protein, adipocyte | / | 0.446 | |
| 3k8q | 22A | Purine nucleoside phosphorylase | 2.4.2.1 | 0.446 | |
| 4b13 | X25 | Glycylpeptide N-tetradecanoyltransferase | / | 0.446 | |
| 4b1e | 6T6 | Beta-secretase 1 | 3.4.23.46 | 0.446 | |
| 4eso | NAP | Putative oxidoreductase | / | 0.446 | |
| 4fue | 7UP | Urokinase-type plasminogen activator | 3.4.21.73 | 0.446 | |
| 1lce | TMF | Thymidylate synthase | / | 0.445 | |
| 2w3b | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.445 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.445 | |
| 3dys | 5GP | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.445 | |
| 3hii | PNT | Amiloride-sensitive amine oxidase [copper-containing] | / | 0.445 | |
| 3pft | FMN | Flavin reductase | / | 0.445 | |
| 4p9d | TMP | Deoxycytidylate deaminase | / | 0.445 | |
| 1cne | FAD | Nitrate reductase [NADH] | 1.7.1.1 | 0.444 | |
| 1i5r | HYC | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.444 | |
| 1pqc | 444 | Oxysterols receptor LXR-beta | / | 0.444 | |
| 1rt9 | IMH | Purine nucleoside phosphorylase | 2.4.2.1 | 0.444 | |
| 1uh5 | TCL | Enoyl-ACP reductase | / | 0.444 | |
| 2b58 | COA | Diamine acetyltransferase 1 | / | 0.444 | |
| 2dvl | FAD | Acyl-CoA dehydrogenase | / | 0.444 | |
| 2fzn | FAD | Bifunctional protein PutA | 1.5.5.2 | 0.444 | |
| 2iko | 7IG | Renin | 3.4.23.15 | 0.444 | |
| 2il2 | LIX | Renin | 3.4.23.15 | 0.444 | |
| 2y5h | Y5H | Coagulation factor X | 3.4.21.6 | 0.444 | |
| 3h3r | 14H | Collagen type IV alpha-3-binding protein | / | 0.444 | |
| 4baq | M4Z | Prothrombin | 3.4.21.5 | 0.444 | |
| 4fm8 | 0UQ | Beta-secretase 1 | 3.4.23.46 | 0.444 | |
| 4o1m | NAD | Enoyl-acyl carrier reductase | / | 0.444 | |
| 4tvj | 09L | Poly [ADP-ribose] polymerase 2 | 2.4.2.30 | 0.444 | |
| 5dsy | UHB | Poly [ADP-ribose] polymerase 2 | 2.4.2.30 | 0.444 | |
| 1cnf | FAD | Nitrate reductase [NADH] | 1.7.1.1 | 0.443 | |
| 1cul | FOK | Adenylate cyclase type 2 | / | 0.443 | |
| 1cul | FOK | Adenylate cyclase type 5 | / | 0.443 | |
| 1kbo | 340 | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.443 | |
| 1m78 | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 1p4a | PCP | Pur operon repressor | / | 0.443 | |
| 1rsz | DIH | Purine nucleoside phosphorylase | 2.4.2.1 | 0.443 | |
| 1u71 | MXA | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 1zxn | ADP | DNA topoisomerase 2-alpha | 5.99.1.3 | 0.443 | |
| 2bu9 | HFV | Isopenicillin N synthase | 1.21.3.1 | 0.443 | |
| 2ym1 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.443 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.443 | |
| 3nxx | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 3zg6 | APR | NAD-dependent protein deacetylase sirtuin-6 | 3.5.1 | 0.443 | |
| 4bft | ZVT | Pantothenate kinase | 2.7.1.33 | 0.443 | |
| 4fud | 6UP | Urokinase-type plasminogen activator | 3.4.21.73 | 0.443 | |
| 4tx9 | AMZ | Phosphoribosyl isomerase A | / | 0.443 | |
| 1dhf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.442 | |
| 1k7f | IAV | Tryptophan synthase alpha chain | / | 0.442 | |
| 1uda | UFG | UDP-glucose 4-epimerase | 5.1.3.2 | 0.442 | |
| 1zdw | FLV | Prenyltransferase | / | 0.442 | |
| 2aq7 | TL5 | 3-oxoacyl-[acyl-carrier-protein] synthase 1 | 2.3.1.41 | 0.442 | |
| 2g1r | 3IG | Renin | 3.4.23.15 | 0.442 | |
| 2vyq | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.442 | |
| 3bk2 | U5P | Ribonuclease J | / | 0.442 | |
| 3sni | 546 | cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A | 3.1.4.17 | 0.442 | |
| 4fub | 4UP | Urokinase-type plasminogen activator | 3.4.21.73 | 0.442 | |
| 4h1e | 10J | Beta-secretase 1 | 3.4.23.46 | 0.442 | |
| 4zzi | 1NS | NAD-dependent protein deacetylase sirtuin-1 | 3.5.1 | 0.442 | |
| 1f92 | UKP | Urokinase-type plasminogen activator | 3.4.21.73 | 0.441 | |
| 1h69 | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.441 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.441 | |
| 2yy2 | IBM | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.441 | |
| 3k3h | BYE | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.441 | |
| 3otb | DGT | Probable tRNA(His) guanylyltransferase | 2.7.7.79 | 0.441 | |
| 4bfs | ZVS | Pantothenate kinase | 2.7.1.33 | 0.441 | |
| 4e90 | 7RG | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.441 | |
| 2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.440 | |
| 2ddo | ATP | Pyridoxine/pyridoxal/pyridoxamine kinase | / | 0.440 | |
| 2q0l | NAP | Thioredoxin reductase | 1.8.1.9 | 0.440 | |
| 2q7o | IMH | Purine nucleoside phosphorylase | 2.4.2.1 | 0.440 | |
| 2viv | VG2 | Urokinase-type plasminogen activator | 3.4.21.73 | 0.440 | |
| 3jsx | CC2 | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.440 | |
| 3ogw | IMN | Lactoperoxidase | 1.11.1.7 | 0.440 | |
| 3p0f | BAU | Uridine phosphorylase 2 | 2.4.2.3 | 0.440 | |
| 4bfv | ZVV | Pantothenate kinase | 2.7.1.33 | 0.440 | |
| 4cf6 | CBD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.440 | |
| 4ead | 0NP | Thymidine phosphorylase | 2.4.2.4 | 0.440 | |
| 4g2j | 0WF | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.440 | |
| 4jji | NAD | Alcohol dehydrogenase class-3 | / | 0.440 | |
| 4r20 | AER | Cytochrome P450 family 17 polypeptide 2 | / | 0.440 | |
| 5ilw | URI | Ribosome inactivating protein | / | 0.440 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.440 |