2.360 Å
X-ray
2013-04-24
Name: | Stimulator of interferon genes protein |
---|---|
ID: | STING_MOUSE |
AC: | Q3TBT3 |
Organism: | Mus musculus |
Reign: | Eukaryota |
TaxID: | 10090 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 49 % |
B | 51 % |
B-Factor: | 59.494 |
---|---|
Number of residues: | 43 |
Including | |
Standard Amino Acids: | 43 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.956 | 1002.375 |
% Hydrophobic | % Polar |
---|---|
39.39 | 60.61 |
According to VolSite |
HET Code: | C2E |
---|---|
Formula: | C20H22N10O14P2 |
Molecular weight: | 688.395 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 62.13 % |
Polar Surface area: | 366.32 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 20 |
H-Bond Donors: | 6 |
Rings: | 7 |
Aromatic rings: | 2 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 3 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-16.7734 | -18.7566 | -7.10489 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O2' | O | GLY- 165 | 3.21 | 156.59 | H-Bond (Ligand Donor) |
C4A | CZ | TYR- 166 | 4.32 | 0 | Hydrophobic |
C4' | CE1 | TYR- 166 | 3.5 | 0 | Hydrophobic |
C1' | CD1 | TYR- 166 | 3.29 | 0 | Hydrophobic |
C1A | CE1 | TYR- 166 | 3.59 | 0 | Hydrophobic |
C2' | CD1 | LEU- 211 | 3.92 | 0 | Hydrophobic |
O2P | NH1 | ARG- 237 | 2.74 | 121.56 | H-Bond (Protein Donor) |
O21 | NH2 | ARG- 237 | 3.2 | 145.82 | H-Bond (Protein Donor) |
O11 | NE | ARG- 237 | 3.22 | 144.7 | H-Bond (Protein Donor) |
O2P | O | VAL- 238 | 2.86 | 164.65 | H-Bond (Ligand Donor) |
O11 | OG | SER- 240 | 2.87 | 137.61 | H-Bond (Protein Donor) |
C5A | CB | SER- 240 | 3.82 | 0 | Hydrophobic |