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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2nvcITAAldose reductase1.1.1.21

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2nvcITAAldose reductase1.1.1.211.000
2pdj393Aldose reductase1.1.1.210.649
1ekoI84Aldose reductase1.1.1.210.636
3u2cSUZAldose reductase1.1.1.210.615
2f2kTGGAldose reductase1.1.1.210.614
4gabFIDAldo-keto reductase family 1 member B101.1.10.613
2pdyFIDAldose reductase1.1.1.210.607
2pdwFIDAldose reductase1.1.1.210.605
3p2vDOYAldose reductase1.1.1.210.598
1ef3FIDAldose reductase1.1.1.210.597
1pwmFIDAldose reductase1.1.1.210.589
3v35NTIAldose reductase1.1.1.210.584
3s3gTLTAldose reductase1.1.1.210.580
1ah0SBIAldose reductase1.1.1.210.577
2pd9FIDAldose reductase1.1.1.210.577
2is72CLAldose reductase1.1.1.210.562
5liu388Aldo-keto reductase family 1 member B101.1.10.555
2pdkSBIAldose reductase1.1.1.210.548
2inzOHPAldose reductase1.1.1.210.539
3mb9ZSTAldose reductase1.1.1.210.532
2pdlTOLAldose reductase1.1.1.210.521
2agtFIDAldose reductase1.1.1.210.518
1el3I84Aldose reductase1.1.1.210.511
4wevSUZAldo-keto reductase family 1 member B101.1.10.507
4b13X25Glycylpeptide N-tetradecanoyltransferase/0.498
2pdc393Aldose reductase1.1.1.210.497
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.494
2fzbTOLAldose reductase1.1.1.210.492
4bfwZVWPantothenate kinase2.7.1.330.492
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.490
1ah3TOLAldose reductase1.1.1.210.487
1u70MTXDihydrofolate reductase1.5.1.30.487
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.487
4b144XBGlycylpeptide N-tetradecanoyltransferase/0.485
4fam0SZAldo-keto reductase family 1 member C3/0.482
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.481
2iki388Aldose reductase1.1.1.210.479
3hbfMYCFlavonoid 3-O-glucosyltransferase2.4.10.479
1isgAGSADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 23.2.2.60.478
3v94WYQPhosphodiesterase/0.478
4b117I1Glycylpeptide N-tetradecanoyltransferase/0.478
4paaTHGDimethylglycine dehydrogenase, mitochondrial1.5.8.40.478
4uugPXGBranched-chain amino acid aminotransferase, putative/0.478
2iqdLPAAldose reductase1.1.1.210.477
1q0zAKAAclacinomycin methylesterase RdmC3.1.1.950.476
1ry0PG2Aldo-keto reductase family 1 member C3/0.476
2fzdTOLAldose reductase1.1.1.210.476
3ojwFMNNADPH--cytochrome P450 reductase/0.476
4jpg1OXPyruvate kinase PKM2.7.1.400.476
3f3y4OABile salt sulfotransferase2.8.2.140.475
5a4vQUEGlutathione S-transferase F22.5.1.180.473
5d6lCAUBeta-2 adrenergic receptor/0.473
3bv7NAP3-oxo-5-beta-steroid 4-dehydrogenase/0.472
4e2yJHZMethyltransferase/0.472
1ejbINJ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.471
1q0rAKTAclacinomycin methylesterase RdmC3.1.1.950.470
1z3n3NAAldose reductase1.1.1.210.470
3m4h388Aldose reductase1.1.1.210.470
1az1ALRAldose reductase1.1.1.210.469
1s3uTQDDihydrofolate reductase1.5.1.30.469
4a959MTGlycylpeptide N-tetradecanoyltransferase/0.469
4zzi1NSNAD-dependent protein deacetylase sirtuin-13.5.10.469
2dv0ZSTAldose reductase1.1.1.210.468
4m6kFOLDihydrofolate reductase1.5.1.30.468
4pabTHGDimethylglycine dehydrogenase, mitochondrial1.5.8.40.468
1ry8RUTAldo-keto reductase family 1 member C3/0.467
1q83TZ5Acetylcholinesterase3.1.1.70.466
3ghsLDTAldose reductase1.1.1.210.466
3qe2FMNNADPH--cytochrome P450 reductase/0.466
1ut6A8NAcetylcholinesterase3.1.1.70.465
1z71L17Prothrombin3.4.21.50.465
2pdxZSTAldose reductase1.1.1.210.465
2pzn393Aldose reductase1.1.1.210.465
2w3mFOLDihydrofolate reductase1.5.1.30.465
2xlpNAPPutative flavin-containing monooxygenase/0.465
3g58988cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.465
3g5eQ74Aldose reductase1.1.1.210.465
3nubUD0UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase2.6.1.980.465
4gts7TPGeranylgeranyl transferase type-2 subunit beta2.5.1.600.465
2e94364Geranylgeranyl pyrophosphate synthase/0.464
2gl0ADNUncharacterized protein/0.464
2ipiAKYAclacinomycin-N/aclacinomycin-A oxidase/0.464
2w6cBM4Acetylcholinesterase3.1.1.70.464
2xupTZ5Acetylcholinesterase3.1.1.70.464
4tvj09LPoly [ADP-ribose] polymerase 22.4.2.300.464
1e1fPSG4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic3.2.1.1820.463
2vrjNCWBeta-glucosidase A3.2.1.210.463
3ghuLDTAldose reductase1.1.1.210.463
3lqlLDTAldose reductase1.1.1.210.463
3m0iZSTAldose reductase1.1.1.210.463
3ppkFNISerine/threonine-protein kinase B-raf2.7.11.10.463
3qfrFADNADPH--cytochrome P450 reductase/0.463
4kmzFOLFolate receptor beta/0.463
1t40ID5Aldose reductase1.1.1.210.462
3aivHBO4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase, chloroplastic3.2.1.1820.462
4c2z646Glycylpeptide N-tetradecanoyltransferase 1/0.462
1ohjCOPDihydrofolate reductase1.5.1.30.461
2hv5ZSTAldose reductase1.1.1.210.461
4kfjFOLDihydrofolate reductase1.5.1.30.461
1hb3SCVIsopenicillin N synthase1.21.3.10.460
2i17LDTAldose reductase1.1.1.210.460
2y1x845Histone-arginine methyltransferase CARM1/0.460
4dz5NAPAldo-keto reductase family 1 member C3/0.460
4kebFOLDihydrofolate reductase1.5.1.30.460
1kmsLIHDihydrofolate reductase1.5.1.30.459
2pdp393Aldose reductase1.1.1.210.459
3pz3PZ3Geranylgeranyl transferase type-2 subunit beta2.5.1.600.459
4gv25MEPoly [ADP-ribose] polymerase 32.4.2.300.459
4hx519VCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.459
4nwiCTN7-methylguanosine phosphate-specific 5'-nucleotidase/0.459
4oex5EOcGMP-specific 3',5'-cyclic phosphodiesterase/0.459
1hfrMOTDihydrofolate reductase1.5.1.30.458
2aot2PMHistamine N-methyltransferase2.1.1.80.458
2fz9ZSTAldose reductase1.1.1.210.458
2vqqTFGHistone deacetylase 43.5.1.980.458
2zu9GDPMannosyl-3-phosphoglycerate synthase2.4.1.2170.458
3m64393Aldose reductase1.1.1.210.458
4jtqFLPAldo-keto reductase family 1 member C2/0.458
2c1zKMPAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.457
3sl8JN7cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.457
4kn104JFolate receptor beta/0.457
2ycxP32Beta-1 adrenergic receptor/0.457
4u140HKMuscarinic acetylcholine receptor M3/0.457
2y035FWBeta-1 adrenergic receptor/0.456
3lenZSTAldose reductase1.1.1.210.456
3tfjTHGDimethylsulfonioproprionate demethylase DmdA2.1.1.2690.456
1sqi8694-hydroxyphenylpyruvate dioxygenase/0.455
1u72MTXDihydrofolate reductase1.5.1.30.455
2i16LDTAldose reductase1.1.1.210.455
2pdu393Aldose reductase1.1.1.210.455
2y1w849Histone-arginine methyltransferase CARM1/0.455
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.455
3gyf51PDihydrofolate reductase1.5.1.30.455
4dbuBT9Aldo-keto reductase family 1 member C3/0.455
4fcb0T7cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.455
4fcd0T6cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.455
4mqt2CUMuscarinic acetylcholine receptor M2/0.455
1pd9CO4Dihydrofolate reductase1.5.1.30.454
1z8962PAldose reductase1.1.1.210.454
3ghrLDTAldose reductase1.1.1.210.454
3n0hTOPDihydrofolate reductase1.5.1.30.454
4htx19FcGMP-dependent 3',5'-cyclic phosphodiesterase3.1.4.170.454
1sg0STLRibosyldihydronicotinamide dehydrogenase [quinone]/0.453
1xomCIOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.453
2obxINI6,7-dimethyl-8-ribityllumazine synthase 22.5.1.780.453
3lboLDTAldose reductase1.1.1.210.453
3u5ySCGRaucaffricine-O-beta-D-glucosidase3.2.1.1250.453
4dbw511Aldo-keto reductase family 1 member C3/0.453
5jqhCAUBeta-2 adrenergic receptor/0.453
1frbZSTAldose reductase-related protein 2/0.452
1lnmDTXBilin-binding protein/0.452
2fzjDH3Dihydrofolate reductase1.5.1.30.452
2zb8IMNProstaglandin reductase 21.3.1.480.452
3burTES3-oxo-5-beta-steroid 4-dehydrogenase/0.452
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
3irhDTPHD domain protein/0.452
3tdaPN0Cytochrome P450 2D6/0.452
3zkuHCVIsopenicillin N synthase1.21.3.10.452
4fk3325Serine/threonine-protein kinase B-raf2.7.11.10.452
2aouCQAHistamine N-methyltransferase2.1.1.80.451
2dhfDZFDihydrofolate reductase1.5.1.30.451
2ouu35GcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.451
2r04W71Genome polyprotein/0.451
3casASD3-oxo-5-beta-steroid 4-dehydrogenase/0.451
3wavDWVEctonucleotide pyrophosphatase/phosphodiesterase family member 23.1.4.390.451
4i5xFLFAldo-keto reductase family 1 member B101.1.10.451
5ds309LPoly [ADP-ribose] polymerase 12.4.2.300.451
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.450
1pwlBFIAldose reductase1.1.1.210.450
2fb8215Serine/threonine-protein kinase B-raf2.7.11.10.450
2hzqSTRApolipoprotein D/0.450
3u57DH8Raucaffricine-O-beta-D-glucosidase3.2.1.1250.450
4bb3KKAIsopenicillin N synthase1.21.3.10.450
4drhRAPSerine/threonine-protein kinase mTOR2.7.11.10.450
4drhRAPPeptidyl-prolyl cis-trans isomerase FKBP55.2.1.80.450
4hhz15SPoly [ADP-ribose] polymerase 12.4.2.300.450
4wbdADPPutative cysteine ligase BshC/0.450
1d3dBZTProthrombin3.4.21.50.449
1qvtPRLHTH-type transcriptional regulator QacR/0.449
1uk1FRQPoly [ADP-ribose] polymerase 12.4.2.300.449
1w76GNTAcetylcholinesterase3.1.1.70.449
2wsa646Glycylpeptide N-tetradecanoyltransferase/0.449
2xi4AFTAcetylcholinesterase3.1.1.70.449
3c72CX1Geranylgeranyl transferase type-2 subunit beta2.5.1.600.449
3uyk0CXProbable NDP-rhamnosyltransferase/0.449
1pqc444Oxysterols receptor LXR-beta/0.448
1wkgPOI[LysW]-aminoadipate semialdehyde transaminase/0.448
2b8jADNClass B acid phosphatase3.1.3.20.448
2ha6SCKAcetylcholinesterase3.1.1.70.448
2ovvPFHcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
2wu4HBPAcetylcholinesterase3.1.1.70.448
2z7hGG3Geranylgeranyl pyrophosphate synthase/0.448
4ajdF04cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
1drfFOLDihydrofolate reductase1.5.1.30.447
1xngDNDNH(3)-dependent NAD(+) synthetase6.3.1.50.447
1zuaTOLAldo-keto reductase family 1 member B101.1.10.447
2j3qTFLAcetylcholinesterase3.1.1.70.447
3a1l2CCCytochrome P450/0.447
4dbs0HVAldo-keto reductase family 1 member C3/0.447
4kq6DLZ6,7-dimethyl-8-ribityllumazine synthase/0.447
1pj6FOLDimethylglycine oxidase1.5.3.100.446
2ouyCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.446
3c49KU8Poly [ADP-ribose] polymerase 32.4.2.300.446
3f90FMNFlavodoxin/0.446
3owxXRARibosyldihydronicotinamide dehydrogenase [quinone]/0.446
4oew5IOcGMP-specific 3',5'-cyclic phosphodiesterase/0.446
5d5aCAUBeta-2 adrenergic receptor/0.446
1sa5BMVProtein farnesyltransferase subunit beta2.5.1.580.445
1xf0ASDAldo-keto reductase family 1 member C3/0.445
2ckmAA7Acetylcholinesterase3.1.1.70.445
2ohhFMNType A flavoprotein FprA10.445
2rcwAAIPoly [ADP-ribose] polymerase 12.4.2.300.445
3dr4G4MGDP-perosamine synthase/0.445
4dyb0MHNucleoprotein/0.445
4j7gTRHPCZA361.3/0.445
4kn0MTXFolate receptor beta/0.445
4phlPILPhosphodiesterase/0.445
1dgbNDPCatalase1.11.1.60.444
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.444
1us0LDTAldose reductase1.1.1.210.444
1zq5E04Aldo-keto reductase family 1 member C3/0.444
2jl1NAPTriphenylmethane reductase/0.444
2pdbZSTAldose reductase1.1.1.210.444
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.444
4arbC57Acetylcholinesterase3.1.1.70.444
4g2wNI0cGMP-specific 3',5'-cyclic phosphodiesterase/0.444
4gv4MEJPoly [ADP-ribose] polymerase 32.4.2.300.444
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.444
4ia05BBcGMP-specific 3',5'-cyclic phosphodiesterase/0.444
4ky404JBifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.444
4n3l2FNProthrombin3.4.21.50.444
1nm6L86Prothrombin3.4.21.50.443
1u65CP0Acetylcholinesterase3.1.1.70.443
1v08NTZ4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic3.2.1.1820.443
2ovyPFJcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.443
2r7nADP5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase/0.443
2y6fM9FIsopenicillin N synthase1.21.3.10.443
3fapARDPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.443
3fapARDSerine/threonine-protein kinase mTOR2.7.11.10.443
3r8hZOMAldo-keto reductase family 1 member C3/0.443
4jqaID8Aldo-keto reductase family 1 member C2/0.443
4kn2LYAFolate receptor beta/0.443
4lrhFOLFolate receptor alpha/0.443
5agkH4BNitric oxide synthase, brain1.14.13.390.443
4ldlXQCBeta-2 adrenergic receptor/0.443
1ieiZESAldose reductase1.1.1.210.442
2c9zQUEAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.442
2f3815MAldo-keto reductase family 1 member C3/0.442
2j83BATUlilysin3.4.240.442
2pdq47DAldose reductase1.1.1.210.442
2pk3GDDGDP-6-deoxy-D-mannose reductase/0.442
3dr7GPDGDP-perosamine synthase/0.442
3rj0BLDProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.442
1bk0ACVIsopenicillin N synthase1.21.3.10.441
1d6w00RProthrombin3.4.21.50.441
1esmCOAPantothenate kinase2.7.1.330.441
1mvtDTMDihydrofolate reductase1.5.1.30.441
1zgcA2EAcetylcholinesterase3.1.1.70.441
2a3bCFFEndochitinase B13.2.1.140.441
2gywOBIAcetylcholinesterase3.1.1.70.441
2jgsBTNAvidin/0.441
3g45988cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.441
3lz5LDTAldose reductase1.1.1.210.441
4amjCVDBeta-1 adrenergic receptor/0.441
4c1iEH9cGMP-dependent 3',5'-cyclic phosphodiesterase3.1.4.170.441
4dya0MFNucleoprotein/0.441
1blzACVIsopenicillin N synthase1.21.3.10.440
1jqdSAHHistamine N-methyltransferase2.1.1.80.440
1k4mNADNicotinate-nucleotide adenylyltransferase2.7.7.180.440
1q84TZ4Acetylcholinesterase3.1.1.70.440
1rpwDIDHTH-type transcriptional regulator QacR/0.440
2bjsACVIsopenicillin N synthase1.21.3.10.440
2c97JCL6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.440
2pdh47DAldose reductase1.1.1.210.440
3b8xG4MPutative pyridoxamine 5-phosphate-dependent dehydrase/0.440
3jsxCC2NAD(P)H dehydrogenase [quinone] 11.6.5.20.440
3ou2SAHSAM-dependent methyltransferase/0.440
3uzwNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.440
4buuF38Tankyrase-22.4.2.300.440
4gtv7TRGeranylgeranyl transferase type-2 subunit beta2.5.1.600.440
4to1DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.440