2.400 Å
X-ray
2010-12-10
| Name: | Histone-arginine methyltransferase CARM1 |
|---|---|
| ID: | CARM1_HUMAN |
| AC: | Q86X55 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 24.753 |
|---|---|
| Number of residues: | 33 |
| Including | |
| Standard Amino Acids: | 29 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | CL |
| Ligandability | Volume (Å3) |
|---|---|
| 0.717 | 729.000 |
| % Hydrophobic | % Polar |
|---|---|
| 43.52 | 56.48 |
| According to VolSite | |

| HET Code: | 845 |
|---|---|
| Formula: | C24H23F3N7O2 |
| Molecular weight: | 498.480 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 62.47 % |
| Polar Surface area: | 121.42 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 6 |
| H-Bond Donors: | 5 |
| Rings: | 5 |
| Aromatic rings: | 3 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| 29.5543 | -19.2566 | -22.5447 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C23 | CZ | TYR- 154 | 4.36 | 0 | Hydrophobic |
| C7 | CB | ASN- 162 | 4.21 | 0 | Hydrophobic |
| F17 | CB | ASN- 162 | 3.46 | 0 | Hydrophobic |
| C7 | CG | MET- 163 | 4.3 | 0 | Hydrophobic |
| C9 | SD | MET- 163 | 3.79 | 0 | Hydrophobic |
| N22 | OE1 | GLU- 258 | 2.85 | 0 | Ionic (Ligand Cationic) |
| N22 | OE2 | GLU- 258 | 2.76 | 0 | Ionic (Ligand Cationic) |
| N22 | O | GLU- 258 | 2.55 | 138.9 | H-Bond (Ligand Donor) |
| N22 | OE2 | GLU- 258 | 2.76 | 139.25 | H-Bond (Ligand Donor) |
| N22 | O | MET- 260 | 3.15 | 140.46 | H-Bond (Ligand Donor) |
| N14 | OE2 | GLU- 267 | 2.69 | 140.15 | H-Bond (Ligand Donor) |
| C23 | SD | MET- 269 | 4.42 | 0 | Hydrophobic |
| O21 | NE2 | HIS- 415 | 2.79 | 163.63 | H-Bond (Protein Donor) |
| F18 | CB | HIS- 415 | 3.84 | 0 | Hydrophobic |
| F18 | CE1 | TYR- 417 | 3.71 | 0 | Hydrophobic |
| C29 | CZ | PHE- 475 | 3.49 | 0 | Hydrophobic |
| F16 | CE1 | TYR- 477 | 4.49 | 0 | Hydrophobic |
| F18 | CZ | TYR- 477 | 4.28 | 0 | Hydrophobic |