1.900 Å
X-ray
2004-03-25
Name: | 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic |
---|---|
ID: | HGGL1_MAIZE |
AC: | P49235 |
Organism: | Zea mays |
Reign: | Eukaryota |
TaxID: | 4577 |
EC Number: | 3.2.1.182 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 19.848 |
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Number of residues: | 24 |
Including | |
Standard Amino Acids: | 22 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.882 | 870.750 |
% Hydrophobic | % Polar |
---|---|
58.91 | 41.09 |
According to VolSite |
HET Code: | NTZ |
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Formula: | C6H10N4O4 |
Molecular weight: | 202.168 g/mol |
DrugBank ID: | DB02471 |
Buried Surface Area: | 56.14 % |
Polar Surface area: | 124.52 Å2 |
Number of | |
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H-Bond Acceptors: | 7 |
H-Bond Donors: | 4 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
22.3404 | 54.6701 | -0.484214 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O2 | OG1 | THR- 194 | 2.95 | 166.89 | H-Bond (Ligand Donor) |
C2 | CG2 | THR- 194 | 3.54 | 0 | Hydrophobic |
C6 | CE1 | PHE- 198 | 4 | 0 | Hydrophobic |
C4 | CZ | PHE- 205 | 4.14 | 0 | Hydrophobic |
C3 | CZ2 | TRP- 378 | 4.2 | 0 | Hydrophobic |
C5 | CE2 | TRP- 378 | 3.74 | 0 | Hydrophobic |
O4 | OE2 | GLU- 464 | 3.3 | 120.91 | H-Bond (Ligand Donor) |
C6 | CZ | PHE- 466 | 3.63 | 0 | Hydrophobic |