sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4n3b | 12V | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 4n3b | 12V | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit | / | 1.000 | |
| 4fdn | FAD | Decaprenylphosphoryl-beta-D-ribose oxidase | / | 0.488 | |
| 1fwk | ADP | Homoserine kinase | 2.7.1.39 | 0.485 | |
| 2qbn | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.484 | |
| 4kwi | 1TJ | Reductase homolog | / | 0.481 | |
| 1qvn | FRI | Interleukin-2 | / | 0.479 | |
| 4u0s | ADP | Adenosine monophosphate-protein transferase FICD | 2.7.7.n1 | 0.478 | |
| 1kkq | 471 | Peroxisome proliferator-activated receptor alpha | / | 0.474 | |
| 2giv | ACO | Histone acetyltransferase KAT8 | / | 0.474 | |
| 2hcd | BIV | Vitamin D3 receptor A | / | 0.473 | |
| 4er7 | AW3 | Histone-lysine N-methyltransferase, H3 lysine-79 specific | 2.1.1.43 | 0.472 | |
| 5a3b | APR | SIR2 family protein | / | 0.472 | |
| 1dxq | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.470 | |
| 4d86 | ADP | Poly [ADP-ribose] polymerase 14 | 2.4.2.30 | 0.470 | |
| 2ch6 | ADP | N-acetyl-D-glucosamine kinase | 2.7.1.59 | 0.469 | |
| 4aox | FAD | Steroid monooxygenase | / | 0.469 | |
| 2c29 | NAP | Dihydroflavonol 4-reductase | / | 0.468 | |
| 4ewn | 0VR | Imidazole glycerol phosphate synthase subunit HisF | 4.1.3 | 0.468 | |
| 3l0l | HC3 | Nuclear receptor ROR-gamma | / | 0.467 | |
| 2r26 | CMC | Citrate synthase | 2.3.3.16 | 0.466 | |
| 3ln3 | NAD | Aldo-keto reductase family 1 member C13 | / | 0.466 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.466 | |
| 2hb7 | O1C | Vitamin D3 receptor | / | 0.465 | |
| 4ia3 | BIV | Vitamin D3 receptor A | / | 0.465 | |
| 4kxn | 6K6 | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 | / | 0.465 | |
| 2xgo | ZKD | Uncharacterized protein | / | 0.464 | |
| 2z3u | CRR | Cytochrome P450 | / | 0.463 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.463 | |
| 4geb | 0LD | Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial | 2.6.1.39 | 0.463 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.463 | |
| 1i7g | AZ2 | Peroxisome proliferator-activated receptor alpha | / | 0.462 | |
| 3vt7 | VDX | Vitamin D3 receptor | / | 0.462 | |
| 3vt8 | YI3 | Vitamin D3 receptor | / | 0.462 | |
| 4gh5 | NAD | Short-chain dehydrogenase/reductase SDR | / | 0.462 | |
| 4y93 | 746 | Tyrosine-protein kinase | / | 0.462 | |
| 2ou2 | ACO | Histone acetyltransferase KAT5 | / | 0.461 | |
| 3iae | D7K | Benzaldehyde lyase | / | 0.461 | |
| 3ndr | NAD | Pyridoxal 4-dehydrogenase | 1.1.1.107 | 0.461 | |
| 4g21 | 0VP | Vitamin D3 receptor A | / | 0.461 | |
| 4ktc | 1X3 | Genome polyprotein | 3.4.21.98 | 0.461 | |
| 1qf5 | RPL | Adenylosuccinate synthetase | / | 0.460 | |
| 3cls | FAD | Electron transfer flavoprotein subunit alpha | / | 0.460 | |
| 4a2z | VIQ | Glycylpeptide N-tetradecanoyltransferase | / | 0.460 | |
| 4ejm | NAP | Putative zinc-binding dehydrogenase | / | 0.460 | |
| 4fc0 | 0T2 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.460 | |
| 4j54 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.460 | |
| 4xyb | NDP | Formate dehydrogenase | / | 0.460 | |
| 1dz6 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.459 | |
| 1s5k | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.459 | |
| 1x2h | LPA | Lipoate-protein ligase A | 6.3.1.20 | 0.459 | |
| 3g45 | 988 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.459 | |
| 3vwe | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.459 | |
| 4f4q | FAD | Decaprenylphosphoryl-beta-D-ribose oxidase | / | 0.459 | |
| 4q72 | FAD | Bifunctional protein PutA | / | 0.459 | |
| 1v35 | NAI | Enoyl-ACP reductase | / | 0.458 | |
| 3flk | NAI | Tartrate dehydrogenase/decarboxylase | 1.1.1.93 | 0.458 | |
| 2gtm | LID | Mitogen-activated protein kinase 14 | / | 0.457 | |
| 2rew | REW | Peroxisome proliferator-activated receptor alpha | / | 0.457 | |
| 3d7k | D7K | Benzaldehyde lyase | / | 0.457 | |
| 3oqu | A8S | Abscisic acid receptor PYL9 | / | 0.457 | |
| 4b13 | X25 | Glycylpeptide N-tetradecanoyltransferase | / | 0.457 | |
| 4kwh | NAP | Reductase homolog | / | 0.457 | |
| 4m69 | ANP | Receptor-interacting serine/threonine-protein kinase 3 | 2.7.11.1 | 0.457 | |
| 5eai | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.457 | |
| 1iy8 | NAD | Levodione reductase | / | 0.456 | |
| 1pr9 | NAP | L-xylulose reductase | 1.1.1.10 | 0.456 | |
| 2jd1 | NDP | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | / | 0.456 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.456 | |
| 4b14 | 4XB | Glycylpeptide N-tetradecanoyltransferase | / | 0.456 | |
| 4hxy | NDP | Plm1 | / | 0.456 | |
| 4i02 | CMP | cAMP-activated global transcriptional regulator CRP | / | 0.456 | |
| 1e6w | NAD | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.1.1.35 | 0.455 | |
| 2y0m | ACO | Histone acetyltransferase KAT8 | / | 0.455 | |
| 3mzh | CMP | CRP-like cAMP-activated global transcriptional regulator | / | 0.455 | |
| 3pgp | ACO | Uncharacterized protein | / | 0.455 | |
| 4b8z | NAP | GDP-L-fucose synthase | 1.1.1.271 | 0.455 | |
| 4g95 | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.455 | |
| 4l2i | FAD | Electron transfer flavoprotein alpha/beta-subunit | / | 0.455 | |
| 1fm7 | DFV | Chalcone--flavonone isomerase 1 | 5.5.1.6 | 0.454 | |
| 1sn5 | T3 | Transthyretin | / | 0.454 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.454 | |
| 2y05 | NAP | Prostaglandin reductase 1 | / | 0.454 | |
| 3h2n | B62 | Dihydropteroate synthase | / | 0.454 | |
| 3v0t | ATR | Perakine reductase | 1.1.1.317 | 0.454 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.453 | |
| 2wyv | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.453 | |
| 2x7h | PFN | Prostaglandin reductase 3 | 1 | 0.453 | |
| 3u8w | 09J | Mitogen-activated protein kinase 14 | / | 0.453 | |
| 3w0i | O11 | Vitamin D3 receptor | / | 0.453 | |
| 3zw9 | NAD | Peroxisomal bifunctional enzyme | 1.1.1.35 | 0.453 | |
| 4c71 | 7RD | 3-oxoacyl-ACP synthase | / | 0.453 | |
| 4l4x | NDP | AmphI | / | 0.453 | |
| 1nvt | NAP | Shikimate dehydrogenase (NADP(+)) | / | 0.452 | |
| 3nfa | CBJ | Gag-Pol polyprotein | / | 0.452 | |
| 4iaq | 2GM | 5-hydroxytryptamine receptor 1B | / | 0.452 | |
| 4ruo | BIV | Vitamin D3 receptor A | / | 0.452 | |
| 4wuo | NAD | 3-isopropylmalate dehydrogenase | 1.1.1.85 | 0.452 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.452 | |
| 3fwg | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.451 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.451 | |
| 3nj0 | PYV | Abscisic acid receptor PYL2 | / | 0.451 | |
| 3nmp | PYV | Abscisic acid receptor PYL2 | / | 0.451 | |
| 3nug | NAD | Pyridoxal 4-dehydrogenase | 1.1.1.107 | 0.451 | |
| 3stv | 3HO | Methylketone synthase I | / | 0.451 | |
| 4ge7 | 0K5 | Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial | 2.6.1.39 | 0.451 | |
| 5fkk | TDC | Tetracycline repressor protein class D | / | 0.451 | |
| 1mja | COA | Histone acetyltransferase ESA1 | / | 0.450 | |
| 1ofg | NDP | Glucose--fructose oxidoreductase | 1.1.99.28 | 0.450 | |
| 1rc0 | KT5 | Trifunctional purine biosynthetic protein adenosine-3 | 2.1.2.2 | 0.450 | |
| 1s60 | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.450 | |
| 2b0m | 201 | Dihydroorotate dehydrogenase (quinone), mitochondrial | 1.3.5.2 | 0.450 | |
| 3atz | FMN | Prostaglandin F2a synthase | / | 0.450 | |
| 3fwi | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.450 | |
| 4wo5 | 324 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.450 | |
| 4xg1 | LLP | Diaminopimelate decarboxylase | / | 0.450 | |
| 5k2a | ZMA | Adenosine receptor A2a | / | 0.450 | |
| 1fbm | RTL | Cartilage oligomeric matrix protein | / | 0.449 | |
| 1rf7 | DHF | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 1y4l | SVR | Basic phospholipase A2 homolog 2 | / | 0.449 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.449 | |
| 2qo9 | ANP | Ephrin type-A receptor 3 | 2.7.10.1 | 0.449 | |
| 2rc4 | ACO | Histone acetyltransferase KAT6A | / | 0.449 | |
| 2zui | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.449 | |
| 3ds6 | A17 | Mitogen-activated protein kinase 14 | / | 0.449 | |
| 3h6v | NS6 | Glutamate receptor 2 | / | 0.449 | |
| 3ule | C69 | Actin-related protein 3 | / | 0.449 | |
| 3vdq | NAD | 3-hydroxybutyrate dehydrogenase | / | 0.449 | |
| 4g1z | 0VP | Vitamin D3 receptor A | / | 0.449 | |
| 4g2h | 0VQ | Vitamin D3 receptor A | / | 0.449 | |
| 4ia1 | BIV | Vitamin D3 receptor A | / | 0.449 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.449 | |
| 4q71 | FAD | Bifunctional protein PutA | / | 0.449 | |
| 1gg5 | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.448 | |
| 1i2b | NAD | UDP-sulfoquinovose synthase, chloroplastic | 3.13.1.1 | 0.448 | |
| 1mjb | ACO | Histone acetyltransferase ESA1 | / | 0.448 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.448 | |
| 3czr | 3CZ | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.448 | |
| 3hk1 | B64 | Fatty acid-binding protein, adipocyte | / | 0.448 | |
| 3och | 2MX | Dihydrofolate reductase | 1.5.1.3 | 0.448 | |
| 3q71 | AR6 | Poly [ADP-ribose] polymerase 14 | 2.4.2.30 | 0.448 | |
| 3w5t | LHP | Vitamin D3 receptor | / | 0.448 | |
| 4euf | NAD | Trans-2-enoyl-CoA reductase [NADH] | / | 0.448 | |
| 4fmx | CNL | 1,8-cineole 2-endo-monooxygenase | 1.14.13.156 | 0.448 | |
| 4iar | ERM | 5-hydroxytryptamine receptor 1B | / | 0.448 | |
| 4ryv | ZEA | Protein LlR18A | / | 0.448 | |
| 4y95 | 746 | Tyrosine-protein kinase | / | 0.448 | |
| 4zca | ADP | Kinesin-like protein KIF11 | / | 0.448 | |
| 4zp1 | TPP | Pyruvate decarboxylase | 4.1.1.1 | 0.448 | |
| 2jah | NDP | Clavaldehyde dehydrogenase | / | 0.447 | |
| 2o23 | NAD | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.1.1.35 | 0.447 | |
| 2q59 | 240 | Peroxisome proliferator-activated receptor gamma | / | 0.447 | |
| 2znq | 401 | Peroxisome proliferator-activated receptor delta | / | 0.447 | |
| 3bbt | FMM | Receptor tyrosine-protein kinase erbB-4 | 2.7.10.1 | 0.447 | |
| 3h1v | TK1 | Glucokinase | 2.7.1.2 | 0.447 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.447 | |
| 3w0g | W07 | Vitamin D3 receptor | / | 0.447 | |
| 3wrm | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.447 | |
| 4g1y | 0VO | Vitamin D3 receptor A | / | 0.447 | |
| 4xq9 | NAD | Homospermidine synthase | 2.5.1.44 | 0.447 | |
| 1njf | AGS | DNA polymerase III subunit tau | 2.7.7.7 | 0.446 | |
| 2ix5 | FAD | Acyl-coenzyme A oxidase 4, peroxisomal | 1.3.3.6 | 0.446 | |
| 2p2x | SAH | Diphthine synthase | / | 0.446 | |
| 2prh | 238 | Dihydroorotate dehydrogenase (quinone), mitochondrial | 1.3.5.2 | 0.446 | |
| 2vke | TAC | Tetracycline repressor protein class D | / | 0.446 | |
| 3t4h | MD5 | Alpha-ketoglutarate-dependent dioxygenase AlkB | 1.14.11.33 | 0.446 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.446 | |
| 4fj0 | NAP | 17beta-hydroxysteroid dehydrogenase | / | 0.446 | |
| 4g2f | C07 | Ephrin type-A receptor 3 | 2.7.10.1 | 0.446 | |
| 5cvc | PLP | Serine racemase | / | 0.446 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.445 | |
| 1f17 | NAI | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 1.1.1.35 | 0.445 | |
| 1me8 | RVP | Inosine-5'-monophosphate dehydrogenase | / | 0.445 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.445 | |
| 2r6g | ATP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.445 | |
| 2y3r | TRK | TamL | / | 0.445 | |
| 3em6 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.445 | |
| 3fzn | D7K | Benzoylformate decarboxylase | 4.1.1.7 | 0.445 | |
| 3mvq | NDP | Glutamate dehydrogenase 1, mitochondrial | 1.4.1.3 | 0.445 | |
| 4gt3 | ATP | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.445 | |
| 4ih7 | 1ER | Genome polyprotein | 2.7.7.48 | 0.445 | |
| 4jlc | SU6 | Serine/threonine-protein kinase TBK1 | 2.7.11.1 | 0.445 | |
| 5dp2 | NAP | CurF | / | 0.445 | |
| 1dr3 | HBI | Dihydrofolate reductase | 1.5.1.3 | 0.444 | |
| 1e3w | NAD | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.1.1.35 | 0.444 | |
| 1me6 | IVS | Plasmepsin-2 | 3.4.23.39 | 0.444 | |
| 1pzh | NAD | Lactate dehydrogenase | / | 0.444 | |
| 2igy | A2T | Plasmepsin 2 | / | 0.444 | |
| 2qu6 | 857 | Vascular endothelial growth factor receptor 2 | 2.7.10.1 | 0.444 | |
| 2x6o | 2TC | Tetracycline repressor protein class D | / | 0.444 | |
| 3clu | FAD | Electron transfer flavoprotein subunit alpha | / | 0.444 | |
| 3gry | SAM | Probable ribosomal RNA small subunit methyltransferase A | / | 0.444 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.444 | |
| 3s7b | NH5 | N-lysine methyltransferase SMYD2 | / | 0.444 | |
| 3vt9 | YI4 | Vitamin D3 receptor | / | 0.444 | |
| 4bbh | YBN | Glycylpeptide N-tetradecanoyltransferase | / | 0.444 | |
| 4g34 | 924 | Eukaryotic translation initiation factor 2-alpha kinase 3 | 2.7.11.1 | 0.444 | |
| 4ruj | VDX | Vitamin D3 receptor A | / | 0.444 | |
| 4tuv | CPZ | Cytochrome P450 119 | 1.14 | 0.444 | |
| 5ccc | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.444 | |
| 5hwq | CAA | Hydroxymethylglutaryl-CoA synthase | / | 0.444 | |
| 1dhi | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 1dz4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.443 | |
| 1hdc | CBO | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | 1.1.1.53 | 0.443 | |
| 1hwz | NDP | Glutamate dehydrogenase 1, mitochondrial | 1.4.1.3 | 0.443 | |
| 1kbo | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.443 | |
| 2feu | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.443 | |
| 2i3g | NAP | N-acetyl-gamma-glutamyl-phosphate reductase | 1.2.1.38 | 0.443 | |
| 2o0u | C0M | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.443 | |
| 2ym1 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.443 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.443 | |
| 3d8x | FAD | Thioredoxin reductase 1 | 1.8.1.9 | 0.443 | |
| 3ruc | NAD | UDP-N-acetylglucosamine 4-epimerase | / | 0.443 | |
| 4c7k | NAP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.443 | |
| 4dh6 | 0KN | Beta-secretase 1 | 3.4.23.46 | 0.443 | |
| 4ge4 | 0KE | Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial | 2.6.1.39 | 0.443 | |
| 4u07 | ATP | Adenosine monophosphate-protein transferase FICD | 2.7.7.n1 | 0.443 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.443 | |
| 5a4k | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.443 | |
| 1kbq | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.442 | |
| 1pd9 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.442 | |
| 1xms | ANP | Protein RecA | / | 0.442 | |
| 1ykd | CMP | Adenylate cyclase | / | 0.442 | |
| 2a1n | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.442 | |
| 2g8y | NAD | Hydroxycarboxylate dehydrogenase B | / | 0.442 | |
| 2nry | STU | Interleukin-1 receptor-associated kinase 4 | 2.7.11.1 | 0.442 | |
| 2yer | TQ1 | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.442 | |
| 2ykj | YKJ | Heat shock protein HSP 90-alpha | / | 0.442 | |
| 3cic | 316 | Beta-secretase 1 | 3.4.23.46 | 0.442 | |
| 3f1k | NAP | Uncharacterized oxidoreductase YciK | 1 | 0.442 | |
| 3w8e | NAD | 3-hydroxybutyrate dehydrogenase | / | 0.442 | |
| 4dbz | NDP | Putative ketoacyl reductase | 1.3.1 | 0.442 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.442 | |
| 4edz | 0O5 | Hematopoietic prostaglandin D synthase | / | 0.442 | |
| 4g9l | NGH | Stromelysin-1 | 3.4.24.17 | 0.442 | |
| 4q73 | FAD | Bifunctional protein PutA | / | 0.442 | |
| 1vdc | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.441 | |
| 2iwu | NP5 | ATP-dependent molecular chaperone HSP82 | / | 0.441 | |
| 2nnl | NAP | Dihydroflavonol 4-reductase | 1.1.1.219 | 0.441 | |
| 2qbl | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.441 | |
| 2tsc | CB3 | Thymidylate synthase | / | 0.441 | |
| 3etg | NDP | Glutamate dehydrogenase 1, mitochondrial | 1.4.1.3 | 0.441 | |
| 3p7n | FMN | Light-activated DNA-binding protein EL222 | / | 0.441 | |
| 3qlg | 1N1 | Proto-oncogene tyrosine-protein kinase Src | 2.7.10.2 | 0.441 | |
| 3uku | C69 | Actin-related protein 3 | / | 0.441 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.441 | |
| 3vi2 | HMZ | Orotidine 5'-monophosphate decarboxylase | / | 0.441 | |
| 3zsh | 469 | Mitogen-activated protein kinase 14 | / | 0.441 | |
| 4ez8 | DHF | Thymidylate synthase | 2.1.1.45 | 0.441 | |
| 4xxv | NAD | 3-isopropylmalate dehydrogenase | / | 0.441 | |
| 1cg1 | IMO | Adenylosuccinate synthetase | / | 0.440 | |
| 1edo | NAP | 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic | 1.1.1.100 | 0.440 | |
| 1j3j | NDP | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.440 | |
| 1jpa | ANP | Ephrin type-B receptor 2 | 2.7.10.1 | 0.440 | |
| 1nvm | NAD | Acetaldehyde dehydrogenase | 1.2.1.10 | 0.440 | |
| 1qf4 | RPD | Adenylosuccinate synthetase | / | 0.440 | |
| 1rbz | KT5 | Trifunctional purine biosynthetic protein adenosine-3 | 2.1.2.2 | 0.440 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.440 | |
| 2qbo | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.440 | |
| 2yww | ATP | Aspartate carbamoyltransferase regulatory chain | / | 0.440 | |
| 3drr | R8E | Gag-Pol polyprotein | 2.7.7.49 | 0.440 | |
| 3gts | D3M | DdmC | / | 0.440 | |
| 3to6 | LYS_CMC | Histone acetyltransferase ESA1 | / | 0.440 | |
| 3vrw | YS5 | Vitamin D3 receptor | / | 0.440 | |
| 4rf2 | NAP | NADPH dependent R-specific alcohol dehydrogenase | / | 0.440 | |
| 5k2c | ZMA | Adenosine receptor A2a | / | 0.440 |