1.380 Å
X-ray
2014-12-17
| Name: | Protein LlR18A |
|---|---|
| ID: | L18A_LUPLU |
| AC: | P52778 |
| Organism: | Lupinus luteus |
| Reign: | Eukaryota |
| TaxID: | 3873 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 13.065 |
|---|---|
| Number of residues: | 26 |
| Including | |
| Standard Amino Acids: | 24 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.591 | 1309.500 |
| % Hydrophobic | % Polar |
|---|---|
| 62.63 | 37.37 |
| According to VolSite | |

| HET Code: | ZEA |
|---|---|
| Formula: | C10H13N5O |
| Molecular weight: | 219.243 g/mol |
| DrugBank ID: | DB11337 |
| Buried Surface Area: | 27.27 % |
| Polar Surface area: | 86.72 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 5 |
| H-Bond Donors: | 3 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 4 |
| X | Y | Z |
|---|---|---|
| 0.01175 | 3.24187 | 0.388437 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C15 | CB | SER- 26 | 3.89 | 0 | Hydrophobic |
| O16 | OD1 | ASP- 27 | 3 | 135.25 | H-Bond (Ligand Donor) |
| C15 | CG2 | VAL- 30 | 3.76 | 0 | Hydrophobic |
| C14 | CG1 | VAL- 40 | 4.07 | 0 | Hydrophobic |
| C15 | CG2 | VAL- 40 | 4.25 | 0 | Hydrophobic |
| C14 | CD | LYS- 53 | 3.6 | 0 | Hydrophobic |
| C14 | CD1 | ILE- 55 | 4.1 | 0 | Hydrophobic |
| C11 | CD1 | ILE- 55 | 4.05 | 0 | Hydrophobic |
| C5 | CD1 | ILE- 84 | 4 | 0 | Hydrophobic |
| C11 | CD1 | LEU- 141 | 4.03 | 0 | Hydrophobic |
| C5 | CD1 | LEU- 141 | 3.33 | 0 | Hydrophobic |